Wall clock time and date at job start Sun Mar 7 2021 09:00:44 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46500 * 1 3 3 C 1.35531 * 125.67633 * 2 1 4 4 C 1.35451 * 108.87067 * 180.02562 * 3 2 1 5 5 C 1.50700 * 126.06996 * 180.02562 * 4 3 2 6 6 O 1.42904 * 109.46861 * 300.00046 * 5 4 3 7 7 Si 1.86301 * 109.47544 * 180.02562 * 5 4 3 8 8 C 1.39840 * 107.86502 * 359.73934 * 4 3 2 9 9 C 1.37650 * 125.67619 * 180.02562 * 2 1 3 10 10 C 1.46673 * 126.23755 * 359.97438 * 9 2 1 11 11 O 1.21702 * 120.00009 * 4.01126 * 10 9 2 12 12 N 1.34777 * 120.00263 * 184.01054 * 10 9 2 13 13 C 1.46504 * 120.00146 * 174.85352 * 12 10 9 14 14 C 1.53000 * 109.47153 * 179.97438 * 13 12 10 15 15 F 1.39902 * 112.85124 * 48.80220 * 14 13 12 16 16 C 1.53783 * 113.61614 * 179.97438 * 14 13 12 17 17 C 1.53782 * 87.08121 * 89.11391 * 16 14 13 18 18 H 1.08998 * 113.61694 * 270.80618 * 17 16 14 19 19 C 1.53001 * 113.61497 * 139.98102 * 17 16 14 20 20 O 1.42893 * 109.47192 * 175.00298 * 19 17 16 21 21 C 1.53782 * 87.08026 * 25.43413 * 17 16 14 22 22 H 1.09003 * 109.47322 * 265.04701 * 1 2 3 23 23 H 1.08993 * 109.47358 * 25.05325 * 1 2 3 24 24 H 1.09004 * 109.46634 * 145.05518 * 1 2 3 25 25 H 1.07990 * 125.56331 * 0.04031 * 3 2 1 26 26 H 1.08999 * 109.47387 * 59.99616 * 5 4 3 27 27 H 0.96703 * 113.99640 * 299.99676 * 6 5 4 28 28 H 1.48495 * 109.99901 * 58.67479 * 7 5 4 29 29 H 1.48497 * 109.99968 * 180.02562 * 7 5 4 30 30 H 1.08007 * 126.45823 * 180.26492 * 8 4 3 31 31 H 0.97003 * 119.99836 * 354.84946 * 12 10 9 32 32 H 1.09004 * 109.47174 * 59.99818 * 13 12 10 33 33 H 1.09001 * 109.46792 * 299.99976 * 13 12 10 34 34 H 1.09001 * 113.61137 * 334.57096 * 16 14 13 35 35 H 1.08995 * 113.69367 * 203.68052 * 16 14 13 36 36 H 1.09000 * 109.46622 * 54.99650 * 19 17 16 37 37 H 1.09008 * 109.46997 * 295.00697 * 19 17 16 38 38 H 0.96700 * 113.99980 * 180.02562 * 20 19 17 39 39 H 1.08997 * 113.61464 * 89.11245 * 21 17 16 40 40 H 1.09000 * 113.61643 * 220.01671 * 21 17 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2554 1.1009 0.0000 4 6 3.5521 0.7093 -0.0006 5 6 4.7536 1.6189 -0.0002 6 8 4.7265 2.4443 -1.1665 7 14 6.3090 0.5933 -0.0021 8 6 3.5779 -0.6888 0.0051 9 6 2.2678 -1.1182 -0.0005 10 6 1.8124 -2.5124 -0.0006 11 8 0.6241 -2.7645 -0.0739 12 7 2.7100 -3.5145 0.0805 13 6 2.2515 -4.9013 0.1941 14 6 3.4618 -5.8342 0.2687 15 9 4.4122 -5.4172 1.2068 16 6 3.0873 -7.3207 0.3910 17 6 3.0810 -7.3646 -1.1462 18 1 2.1143 -7.1197 -1.5861 19 6 3.6907 -8.6428 -1.7254 20 8 3.5352 -8.6435 -3.1458 21 6 4.0595 -6.1789 -1.1056 22 1 -0.3634 -0.0887 1.0238 23 1 -0.3634 0.9309 -0.4351 24 1 -0.3633 -0.8424 -0.5887 25 1 1.9081 2.1235 0.0006 26 1 4.7334 2.2473 0.8901 27 1 4.7424 1.9508 -1.9980 28 1 6.3330 -0.2907 -1.1950 29 1 7.5011 1.4787 -0.0011 30 1 4.4583 -1.3144 0.0102 31 1 3.6597 -3.3176 0.0636 32 1 1.6490 -5.1574 -0.6774 33 1 1.6504 -5.0124 1.0967 34 1 2.1068 -7.4887 0.8365 35 1 3.8677 -7.9334 0.8422 36 1 3.1835 -9.5106 -1.3038 37 1 4.7510 -8.6850 -1.4759 38 1 3.8994 -9.4265 -3.5810 39 1 5.1067 -6.4783 -1.0637 40 1 3.8640 -5.4251 -1.8683 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16500644_10803934.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:00:44 Heat of formation + Delta-G solvation = -90.535706 kcal Electronic energy + Delta-G solvation = -24517.741624 eV Core-core repulsion = 20636.287333 eV Total energy + Delta-G solvation = -3881.454292 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 299.137 amu Computer time = 0.74 seconds Orbital eigenvalues (eV) -48.71742 -42.58000 -40.59557 -39.79213 -37.84272 -37.23607 -35.75899 -33.97151 -31.38142 -29.64090 -28.49827 -27.19843 -26.92025 -25.66077 -23.56315 -22.81479 -21.13962 -20.95480 -20.11629 -19.08894 -18.25392 -17.66630 -17.48588 -17.21055 -16.99822 -16.71122 -16.55499 -15.97095 -15.84859 -15.63749 -15.54317 -15.35524 -14.97495 -14.87120 -14.53729 -14.27280 -13.95483 -13.80193 -13.71696 -13.40876 -13.18742 -13.15878 -12.79466 -12.37675 -12.33380 -12.11408 -11.85797 -11.53305 -11.34586 -11.17948 -10.82763 -10.53973 -10.37612 -9.77632 -9.26875 -4.83853 0.34224 1.37986 1.48207 1.58773 1.70702 2.02096 2.20158 2.21818 3.02116 3.10945 3.24659 3.27972 3.47871 3.52289 3.62842 3.86655 3.91845 4.03983 4.18882 4.26820 4.32599 4.36210 4.36498 4.38112 4.52199 4.60834 4.66326 4.67227 4.68914 4.71619 4.73377 4.74740 4.92202 5.01462 5.08820 5.19394 5.33871 5.62992 5.86669 6.13435 6.31372 6.59565 6.88238 6.98357 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.065 3.935 2 N -0.414 5.414 3 C 0.052 3.948 4 C -0.216 4.216 5 C -0.044 4.044 6 O -0.552 6.552 7 Si 0.764 3.236 8 C -0.126 4.126 9 C -0.076 4.076 10 C 0.590 3.410 11 O -0.579 6.579 12 N -0.708 5.708 13 C 0.124 3.876 14 C 0.080 3.920 15 F -0.203 7.203 16 C -0.132 4.132 17 C -0.110 4.110 18 H 0.098 0.902 19 C 0.083 3.917 20 O -0.598 6.598 21 C -0.145 4.145 22 H 0.081 0.919 23 H 0.110 0.890 24 H 0.084 0.916 25 H 0.190 0.810 26 H 0.122 0.878 27 H 0.384 0.616 28 H -0.283 1.283 29 H -0.306 1.306 30 H 0.166 0.834 31 H 0.415 0.585 32 H 0.091 0.909 33 H 0.082 0.918 34 H 0.098 0.902 35 H 0.113 0.887 36 H 0.061 0.939 37 H 0.059 0.941 38 H 0.397 0.603 39 H 0.104 0.896 40 H 0.078 0.922 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.251 -3.795 1.421 4.241 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.075 4.075 2 N -0.086 5.086 3 C -0.085 4.085 4 C -0.221 4.221 5 C -0.154 4.154 6 O -0.360 6.360 7 Si 0.670 3.330 8 C -0.152 4.152 9 C -0.189 4.189 10 C 0.379 3.621 11 O -0.461 6.461 12 N -0.360 5.360 13 C 0.000 4.000 14 C 0.061 3.939 15 F -0.183 7.183 16 C -0.170 4.170 17 C -0.129 4.129 18 H 0.116 0.884 19 C 0.006 3.994 20 O -0.406 6.406 21 C -0.182 4.182 22 H 0.100 0.900 23 H 0.128 0.872 24 H 0.102 0.898 25 H 0.207 0.793 26 H 0.139 0.861 27 H 0.233 0.767 28 H -0.209 1.209 29 H -0.234 1.234 30 H 0.183 0.817 31 H 0.252 0.748 32 H 0.110 0.890 33 H 0.100 0.900 34 H 0.116 0.884 35 H 0.131 0.869 36 H 0.079 0.921 37 H 0.078 0.922 38 H 0.247 0.753 39 H 0.123 0.877 40 H 0.097 0.903 Dipole moment (debyes) X Y Z Total from point charges 0.448 -3.208 1.570 3.600 hybrid contribution 0.220 -0.015 -1.178 1.198 sum 0.669 -3.224 0.392 3.316 Atomic orbital electron populations 1.22369 0.75013 1.05632 1.04531 1.44095 1.07617 1.04917 1.51983 1.22295 0.89959 0.92170 1.04107 1.19809 0.94749 0.93804 1.13788 1.24455 1.02795 0.97614 0.90520 1.86549 1.95823 1.36824 1.16756 0.94135 0.72709 0.78809 0.87344 1.21447 0.94682 0.94964 1.04089 1.19926 0.90920 0.87398 1.20638 1.17107 0.85171 0.84172 0.75600 1.90795 1.17449 1.85369 1.52497 1.45371 1.10503 1.05597 1.74560 1.21649 0.95038 0.79192 1.04146 1.22585 0.87368 0.95144 0.88785 1.92858 1.65940 1.91937 1.67612 1.23581 1.05087 0.92655 0.95703 1.22371 1.00012 0.95026 0.95442 0.88416 1.22206 0.99658 0.96855 0.80685 1.86436 1.84583 1.49145 1.20470 1.23731 1.00933 0.98761 0.94798 0.90015 0.87185 0.89760 0.79257 0.86071 0.76698 1.20943 1.23438 0.81652 0.74766 0.89044 0.89971 0.88388 0.86887 0.92097 0.92240 0.75304 0.87734 0.90315 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 0.00 10.49 127.77 1.34 1.34 16 2 N -0.41 -1.25 3.16 -534.33 -1.69 -2.94 16 3 C 0.05 0.04 11.28 83.48 0.94 0.98 16 4 C -0.22 -0.13 5.41 -20.12 -0.11 -0.24 16 5 C -0.04 0.02 3.00 71.24 0.21 0.24 16 6 O -0.55 -1.36 12.87 -148.98 -1.92 -3.28 16 7 Si 0.76 -1.05 30.64 68.60 2.10 1.05 16 8 C -0.13 -0.08 8.84 22.57 0.20 0.12 16 9 C -0.08 -0.34 6.89 40.35 0.28 -0.06 16 10 C 0.59 3.75 7.78 86.45 0.67 4.42 16 11 O -0.58 -7.09 14.77 -4.35 -0.06 -7.15 16 12 N -0.71 -0.73 5.45 -467.06 -2.55 -3.28 16 13 C 0.12 -0.06 5.25 86.38 0.45 0.39 16 14 C 0.08 -0.22 1.83 -10.27 -0.02 -0.24 16 15 F -0.20 -0.14 16.82 44.97 0.76 0.62 16 16 C -0.13 0.75 7.13 31.12 0.22 0.97 16 17 C -0.11 0.42 3.66 -10.27 -0.04 0.38 16 18 H 0.10 -0.19 7.66 -2.39 -0.02 -0.21 16 19 C 0.08 -0.36 6.88 71.98 0.50 0.13 16 20 O -0.60 0.36 13.66 -148.98 -2.03 -1.68 16 21 C -0.14 0.48 7.09 31.12 0.22 0.70 16 22 H 0.08 -0.06 8.14 -2.39 -0.02 -0.07 16 23 H 0.11 -0.59 8.12 -2.39 -0.02 -0.61 16 24 H 0.08 0.34 6.52 -2.38 -0.02 0.32 16 25 H 0.19 -0.68 8.06 -2.92 -0.02 -0.71 16 26 H 0.12 -0.26 7.96 -2.39 -0.02 -0.28 16 27 H 0.38 -0.94 8.70 -74.06 -0.64 -1.59 16 28 H -0.28 -0.69 7.11 99.48 0.71 0.02 16 29 H -0.31 -1.97 7.11 99.48 0.71 -1.26 16 30 H 0.17 -0.70 5.76 -2.91 -0.02 -0.72 16 31 H 0.42 -1.05 7.08 -92.71 -0.66 -1.71 16 32 H 0.09 0.01 7.34 -2.38 -0.02 -0.01 16 33 H 0.08 0.03 8.14 -2.39 -0.02 0.01 16 34 H 0.10 -0.70 8.10 -2.39 -0.02 -0.72 16 35 H 0.11 -0.82 8.10 -2.39 -0.02 -0.83 16 36 H 0.06 -0.39 8.14 -2.39 -0.02 -0.41 16 37 H 0.06 -0.38 7.84 -2.38 -0.02 -0.40 16 38 H 0.40 -3.45 9.12 -74.06 -0.68 -4.13 16 39 H 0.10 -0.44 7.90 -2.39 -0.02 -0.46 16 40 H 0.08 -0.16 8.10 -2.39 -0.02 -0.18 16 Total: 0.00 -20.10 337.89 -1.37 -21.47 By element: Atomic # 1 Polarization: -13.10 SS G_CDS: -0.85 Total: -13.95 kcal Atomic # 6 Polarization: 4.26 SS G_CDS: 4.87 Total: 9.13 kcal Atomic # 7 Polarization: -1.98 SS G_CDS: -4.24 Total: -6.22 kcal Atomic # 8 Polarization: -8.10 SS G_CDS: -4.02 Total: -12.11 kcal Atomic # 9 Polarization: -0.14 SS G_CDS: 0.76 Total: 0.62 kcal Atomic # 14 Polarization: -1.05 SS G_CDS: 2.10 Total: 1.05 kcal Total: -20.10 -1.37 -21.47 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16500644_10803934.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -69.064 kcal (2) G-P(sol) polarization free energy of solvation -20.103 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -89.167 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.369 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.472 kcal (6) G-S(sol) free energy of system = (1) + (5) -90.536 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.74 seconds