Wall clock time and date at job start Sun Mar 7 2021 09:00:48 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46493 * 1 3 3 C 1.37650 * 125.68148 * 2 1 4 4 C 1.46678 * 126.23054 * 0.03029 * 3 2 1 5 5 O 1.21693 * 120.00176 * 354.33134 * 4 3 2 6 6 N 1.34785 * 119.99912 * 174.59719 * 4 3 2 7 7 C 1.46494 * 120.00098 * 184.78839 * 6 4 3 8 8 C 1.52998 * 109.47059 * 180.02562 * 7 6 4 9 9 F 1.39897 * 112.85106 * 48.81007 * 8 7 6 10 10 C 1.53786 * 113.61110 * 179.97438 * 8 7 6 11 11 C 1.53789 * 87.07762 * 139.98259 * 10 8 7 12 12 H 1.08993 * 113.61055 * 220.01822 * 11 10 8 13 13 C 1.53000 * 113.61104 * 89.20141 * 11 10 8 14 14 O 1.42901 * 109.46886 * 174.99797 * 13 11 10 15 15 C 1.53778 * 113.61646 * 277.49533 * 8 7 6 16 16 C 1.37870 * 107.53741 * 179.77328 * 3 2 1 17 17 C 1.39834 * 107.08410 * 0.22313 * 16 3 2 18 18 C 1.35454 * 107.86489 * 0.02562 * 17 16 3 19 19 C 1.50702 * 125.56693 * 180.02562 * 18 17 16 20 20 O 1.42897 * 109.47284 * 149.97396 * 19 18 17 21 21 Si 1.86305 * 109.46770 * 29.97477 * 19 18 17 22 22 H 1.08998 * 109.47352 * 95.84667 * 1 2 3 23 23 H 1.08998 * 109.47621 * 215.85273 * 1 2 3 24 24 H 1.09004 * 109.46951 * 335.85592 * 1 2 3 25 25 H 0.97003 * 119.99829 * 4.79876 * 6 4 3 26 26 H 1.09004 * 109.46976 * 300.00356 * 7 6 4 27 27 H 1.09000 * 109.47364 * 60.00155 * 7 6 4 28 28 H 1.09001 * 113.61344 * 254.52772 * 10 8 7 29 29 H 1.08996 * 113.61804 * 25.35087 * 10 8 7 30 30 H 1.08998 * 109.47193 * 294.99785 * 13 11 10 31 31 H 1.08997 * 109.47492 * 55.00203 * 13 11 10 32 32 H 0.96696 * 114.00492 * 179.97438 * 14 13 11 33 33 H 1.08995 * 113.61183 * 334.57205 * 15 8 7 34 34 H 1.08993 * 113.61516 * 105.47145 * 15 8 7 35 35 H 1.07997 * 126.46300 * 180.19377 * 16 3 2 36 36 H 1.08001 * 126.06786 * 179.97438 * 17 16 3 37 37 H 1.08998 * 109.46969 * 269.97651 * 19 18 17 38 38 H 0.96698 * 114.00418 * 300.00206 * 20 19 18 39 39 H 1.48496 * 110.00066 * 58.68508 * 21 19 18 40 40 H 1.48501 * 109.99617 * 180.02562 * 21 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4649 0.0000 0.0000 3 6 2.2678 1.1181 0.0000 4 6 1.8124 2.5124 0.0006 5 8 0.6266 2.7652 -0.1029 6 7 2.7079 3.5138 0.1105 7 6 2.2470 4.9002 0.2167 8 6 3.4552 5.8322 0.3284 9 9 4.4302 5.5763 -0.6417 10 6 3.0779 7.3185 0.4448 11 6 4.2107 7.4440 1.4773 12 1 3.9599 8.0813 2.3252 13 6 5.5683 7.7845 0.8593 14 8 6.5259 7.9940 1.8991 15 6 4.0175 5.9436 1.7553 16 6 3.5780 0.6888 0.0052 17 6 3.5521 -0.7093 0.0031 18 6 2.2554 -1.1010 -0.0037 19 6 1.7707 -2.5279 -0.0075 20 8 0.5097 -2.6044 0.6603 21 14 3.0074 -3.6061 0.8753 22 1 -0.3634 -0.1047 -1.0223 23 1 -0.3634 -0.8329 0.6019 24 1 -0.3633 0.9378 0.4204 25 1 3.6576 3.3164 0.1190 26 1 1.6689 5.1599 -0.6702 27 1 1.6212 5.0082 1.1027 28 1 3.2547 7.8867 -0.4685 29 1 2.0848 7.4856 0.8617 30 1 5.8954 6.9609 0.2247 31 1 5.4780 8.6908 0.2606 32 1 7.4117 8.2140 1.5796 33 1 3.2818 5.7347 2.5320 34 1 4.9523 5.4022 1.8998 35 1 4.4583 1.3143 0.0095 36 1 4.4132 -1.3612 0.0057 37 1 1.6586 -2.8708 -1.0361 38 1 0.5346 -2.3140 1.5823 39 1 3.1929 -3.1294 2.2693 40 1 2.5413 -5.0160 0.8779 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16500644_10803936.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:00:48 Heat of formation + Delta-G solvation = -83.659653 kcal Electronic energy + Delta-G solvation = -24614.149686 eV Core-core repulsion = 20732.993563 eV Total energy + Delta-G solvation = -3881.156124 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 299.137 amu Computer time = 0.63 seconds Orbital eigenvalues (eV) -48.97001 -42.57718 -40.40979 -39.73985 -37.97753 -37.23934 -35.72117 -33.75409 -31.79638 -30.12095 -27.65664 -27.36177 -27.17803 -26.03976 -23.32188 -22.78754 -21.42047 -20.68030 -20.15624 -19.05812 -18.53907 -18.23450 -17.39872 -17.07086 -17.03845 -16.82196 -16.41319 -15.98280 -15.94571 -15.56493 -15.37369 -15.28600 -15.02542 -14.83202 -14.40626 -14.27722 -14.14761 -13.82494 -13.75992 -13.56997 -13.33487 -13.15605 -12.93625 -12.56157 -12.34332 -11.95158 -11.90630 -11.65313 -11.41968 -11.17825 -10.88210 -10.77260 -10.24891 -9.72610 -9.08808 -4.99402 0.40546 1.08641 1.51892 1.65218 1.70863 1.93823 2.30083 2.38407 2.85830 2.98520 3.05069 3.08350 3.15961 3.36073 3.53057 3.74642 3.77729 3.99684 4.11048 4.28198 4.32878 4.34871 4.38766 4.40064 4.43073 4.47731 4.51134 4.52452 4.56146 4.72151 4.78633 4.80495 4.96918 5.00631 5.12235 5.14444 5.26679 5.67918 5.97541 6.12366 6.19161 6.39479 6.61308 7.12424 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.054 3.946 2 N -0.392 5.392 3 C -0.054 4.054 4 C 0.593 3.407 5 O -0.546 6.546 6 N -0.717 5.717 7 C 0.116 3.884 8 C 0.078 3.922 9 F -0.183 7.183 10 C -0.141 4.141 11 C -0.111 4.111 12 H 0.096 0.904 13 C 0.085 3.915 14 O -0.573 6.573 15 C -0.146 4.146 16 C -0.134 4.134 17 C -0.197 4.197 18 C 0.013 3.987 19 C -0.056 4.056 20 O -0.532 6.532 21 Si 0.719 3.281 22 H 0.075 0.925 23 H 0.099 0.901 24 H 0.100 0.900 25 H 0.407 0.593 26 H 0.083 0.917 27 H 0.091 0.909 28 H 0.088 0.912 29 H 0.110 0.890 30 H 0.058 0.942 31 H 0.050 0.950 32 H 0.383 0.617 33 H 0.104 0.896 34 H 0.086 0.914 35 H 0.147 0.853 36 H 0.154 0.846 37 H 0.124 0.876 38 H 0.378 0.622 39 H -0.257 1.257 40 H -0.254 1.254 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.737 0.685 0.208 3.805 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.086 4.086 2 N -0.064 5.064 3 C -0.168 4.168 4 C 0.381 3.619 5 O -0.425 6.425 6 N -0.369 5.369 7 C -0.008 4.008 8 C 0.059 3.941 9 F -0.163 7.163 10 C -0.179 4.179 11 C -0.129 4.129 12 H 0.115 0.885 13 C 0.007 3.993 14 O -0.379 6.379 15 C -0.184 4.184 16 C -0.160 4.160 17 C -0.221 4.221 18 C -0.105 4.105 19 C -0.165 4.165 20 O -0.338 6.338 21 Si 0.617 3.383 22 H 0.093 0.907 23 H 0.118 0.882 24 H 0.119 0.881 25 H 0.243 0.757 26 H 0.101 0.899 27 H 0.109 0.891 28 H 0.107 0.893 29 H 0.129 0.871 30 H 0.077 0.923 31 H 0.069 0.931 32 H 0.230 0.770 33 H 0.122 0.878 34 H 0.105 0.895 35 H 0.165 0.835 36 H 0.172 0.828 37 H 0.142 0.858 38 H 0.226 0.774 39 H -0.181 1.181 40 H -0.179 1.179 Dipole moment (debyes) X Y Z Total from point charges 1.906 0.009 0.590 1.995 hybrid contribution 0.073 0.633 0.010 0.637 sum 1.979 0.642 0.600 2.165 Atomic orbital electron populations 1.22580 0.75602 1.05955 1.04493 1.43752 1.06979 1.04040 1.51657 1.19970 0.90588 0.87331 1.18888 1.16953 0.85388 0.83557 0.75985 1.90806 1.16387 1.84816 1.50484 1.45421 1.10315 1.05676 1.75529 1.21813 0.95177 0.79572 1.04219 1.22221 0.86951 0.96641 0.88280 1.92851 1.63935 1.95004 1.64544 1.23566 1.00191 0.93313 1.00846 1.22259 0.93820 0.97317 0.99519 0.88542 1.22065 0.88028 0.99959 0.89239 1.86445 1.22911 1.93452 1.35095 1.23668 1.03023 0.96928 0.94756 1.21311 0.94351 0.95281 1.05064 1.20550 0.94937 0.95188 1.11413 1.21090 0.91086 0.89108 1.09177 1.24943 0.93065 0.94521 1.03977 1.86592 1.29771 1.88352 1.29122 0.94365 0.84895 0.77345 0.81659 0.90650 0.88236 0.88122 0.75718 0.89886 0.89128 0.89318 0.87150 0.92342 0.93136 0.76961 0.87770 0.89487 0.83543 0.82845 0.85829 0.77401 1.18105 1.17910 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.05 0.09 10.20 59.84 0.61 0.70 16 2 N -0.39 -0.91 3.16 -115.62 -0.37 -1.28 16 3 C -0.05 -0.14 6.88 -81.98 -0.56 -0.70 16 4 C 0.59 1.84 7.77 -12.85 -0.10 1.74 16 5 O -0.55 -3.25 14.63 5.20 0.08 -3.17 16 6 N -0.72 -0.22 5.45 -61.62 -0.34 -0.56 16 7 C 0.12 -0.07 5.37 -4.05 -0.02 -0.09 16 8 C 0.08 -0.11 1.65 -89.81 -0.15 -0.26 16 9 F -0.18 -0.06 15.02 2.25 0.03 -0.03 16 10 C -0.14 0.34 7.13 -25.91 -0.18 0.16 16 11 C -0.11 0.14 4.19 -89.79 -0.38 -0.24 16 12 H 0.10 -0.09 8.14 -51.93 -0.42 -0.51 16 13 C 0.08 -0.06 6.66 37.16 0.25 0.18 16 14 O -0.57 -0.21 13.66 -35.23 -0.48 -0.69 16 15 C -0.15 0.25 7.08 -25.90 -0.18 0.07 16 16 C -0.13 -0.07 10.35 -39.12 -0.41 -0.47 16 17 C -0.20 0.02 9.37 -39.98 -0.37 -0.36 16 18 C 0.01 0.01 6.15 -81.95 -0.50 -0.49 16 19 C -0.06 0.04 2.99 36.01 0.11 0.15 16 20 O -0.53 -0.07 10.11 -35.23 -0.36 -0.43 16 21 Si 0.72 -1.27 31.10 -169.99 -5.29 -6.56 16 22 H 0.07 0.13 8.14 -51.93 -0.42 -0.29 16 23 H 0.10 0.00 5.24 -51.93 -0.27 -0.27 16 24 H 0.10 0.28 6.12 -51.93 -0.32 -0.04 16 25 H 0.41 -0.53 7.09 -40.82 -0.29 -0.82 16 26 H 0.08 0.02 8.14 -51.93 -0.42 -0.40 16 27 H 0.09 -0.10 7.94 -51.93 -0.41 -0.51 16 28 H 0.09 -0.22 8.10 -51.93 -0.42 -0.64 16 29 H 0.11 -0.42 8.10 -51.93 -0.42 -0.84 16 30 H 0.06 -0.04 6.32 -51.93 -0.33 -0.37 16 31 H 0.05 -0.08 8.14 -51.93 -0.42 -0.50 16 32 H 0.38 -1.41 9.12 45.56 0.42 -1.00 16 33 H 0.10 -0.27 7.96 -51.93 -0.41 -0.68 16 34 H 0.09 -0.09 8.10 -51.93 -0.42 -0.51 16 35 H 0.15 -0.30 7.45 -52.49 -0.39 -0.69 16 36 H 0.15 -0.46 6.85 -52.49 -0.36 -0.82 16 37 H 0.12 -0.16 7.96 -51.93 -0.41 -0.58 16 38 H 0.38 -0.85 8.29 45.56 0.38 -0.48 16 39 H -0.26 -0.21 7.11 56.52 0.40 0.20 16 40 H -0.25 -0.32 7.11 56.52 0.40 0.08 16 LS Contribution 330.37 15.07 4.98 4.98 Total: 0.00 -8.83 330.37 -8.19 -17.02 By element: Atomic # 1 Polarization: -5.11 SS G_CDS: -4.55 Total: -9.66 kcal Atomic # 6 Polarization: 2.27 SS G_CDS: -1.90 Total: 0.37 kcal Atomic # 7 Polarization: -1.14 SS G_CDS: -0.70 Total: -1.84 kcal Atomic # 8 Polarization: -3.53 SS G_CDS: -0.76 Total: -4.29 kcal Atomic # 9 Polarization: -0.06 SS G_CDS: 0.03 Total: -0.03 kcal Atomic # 14 Polarization: -1.27 SS G_CDS: -5.29 Total: -6.56 kcal Total LS contribution 4.98 Total: 4.98 kcal Total: -8.83 -8.19 -17.02 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16500644_10803936.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -66.637 kcal (2) G-P(sol) polarization free energy of solvation -8.834 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -75.471 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.189 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.023 kcal (6) G-S(sol) free energy of system = (1) + (5) -83.660 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.63 seconds