Wall clock time and date at job start Sun Mar 7 2021 09:00:50 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42899 * 1 3 3 Si 1.86304 * 109.47439 * 2 1 4 4 C 1.50709 * 109.47022 * 240.00336 * 2 1 3 5 5 C 1.36445 * 120.29194 * 240.00189 * 4 2 1 6 6 C 1.40097 * 119.25023 * 179.97438 * 5 4 2 7 7 C 1.40855 * 132.86430 * 179.97438 * 6 5 4 8 8 C 1.46569 * 126.58067 * 359.75243 * 7 6 5 9 9 O 1.21728 * 119.99708 * 0.02562 * 8 7 6 10 10 N 1.34772 * 120.00342 * 180.02562 * 8 7 6 11 11 C 1.46497 * 120.00446 * 180.02562 * 10 8 7 12 12 C 1.52994 * 109.47344 * 180.02562 * 11 10 8 13 13 F 1.39903 * 112.84932 * 316.19306 * 12 11 10 14 14 C 1.53783 * 113.61737 * 87.50265 * 12 11 10 15 15 C 1.53780 * 87.08183 * 89.11586 * 14 12 11 16 16 H 1.08995 * 113.61308 * 270.88757 * 15 14 12 17 17 C 1.53001 * 113.68868 * 139.99345 * 15 14 12 18 18 O 1.42897 * 109.47054 * 87.46717 * 17 15 14 19 19 C 1.53779 * 87.08139 * 25.43431 * 15 14 12 20 20 C 1.40550 * 106.84256 * 180.02562 * 7 6 5 21 21 N 1.30742 * 108.74177 * 359.97438 * 20 7 6 22 22 N 1.36571 * 120.23067 * 359.97438 * 6 5 4 23 23 C 1.36234 * 120.08217 * 0.02562 * 22 6 5 24 24 C 1.35188 * 120.70779 * 359.95806 * 23 22 6 25 25 H 0.96696 * 113.99859 * 59.99570 * 1 2 3 26 26 H 1.09001 * 109.47788 * 120.00473 * 2 1 3 27 27 H 1.48494 * 109.99944 * 60.00283 * 3 2 1 28 28 H 1.48505 * 109.99959 * 181.32166 * 3 2 1 29 29 H 1.08002 * 120.37814 * 0.02562 * 5 4 2 30 30 H 0.97003 * 119.99664 * 0.02562 * 10 8 7 31 31 H 1.09001 * 109.46840 * 300.00123 * 11 10 8 32 32 H 1.09004 * 109.47155 * 59.99330 * 11 10 8 33 33 H 1.08996 * 113.61455 * 203.66587 * 14 12 11 34 34 H 1.09000 * 113.61084 * 334.56324 * 14 12 11 35 35 H 1.09005 * 109.46981 * 207.46008 * 17 15 14 36 36 H 1.08999 * 109.47078 * 327.46385 * 17 15 14 37 37 H 0.96694 * 114.00209 * 180.02562 * 18 17 15 38 38 H 1.09001 * 113.61520 * 220.02145 * 19 15 14 39 39 H 1.09004 * 113.61798 * 89.11825 * 19 15 14 40 40 H 1.08001 * 125.62939 * 179.97438 * 20 7 6 41 41 H 1.08002 * 119.64906 * 179.97438 * 23 22 6 42 42 H 1.07995 * 119.84292 * 180.02562 * 24 23 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7565 0.0000 4 6 1.9313 -0.7104 -1.2306 5 6 2.7161 -1.8203 -1.1124 6 6 3.1705 -2.4639 -2.2708 7 6 3.9747 -3.6007 -2.4826 8 6 4.5804 -4.4468 -1.4503 9 8 4.4053 -4.1903 -0.2732 10 7 5.3312 -5.5086 -1.8041 11 6 5.9361 -6.3545 -0.7723 12 6 6.7313 -7.4800 -1.4371 13 9 6.0491 -8.0680 -2.5077 14 6 8.1840 -7.0971 -1.7655 15 6 8.5510 -7.5969 -0.3583 16 1 8.4820 -6.8271 0.4102 17 6 9.8687 -8.3726 -0.3056 18 8 10.9514 -7.4599 -0.1143 19 6 7.3081 -8.4988 -0.4400 20 6 4.0902 -3.7645 -3.8737 21 7 3.4165 -2.8134 -4.4660 22 7 2.8296 -1.9835 -3.5030 23 6 2.0456 -0.8746 -3.6106 24 6 1.5954 -0.2376 -2.5065 25 1 -0.3933 0.4417 -0.7650 26 1 1.7924 -0.5139 0.8899 27 1 1.5617 2.4678 1.2085 28 1 3.5347 1.7702 -0.0322 29 1 2.9833 -2.1989 -0.1368 30 1 5.4711 -5.7126 -2.7421 31 1 6.6042 -5.7535 -0.1554 32 1 5.1520 -6.7828 -0.1479 33 1 8.6214 -7.6914 -2.5678 34 1 8.3332 -6.0260 -1.9012 35 1 9.8404 -9.0813 0.5221 36 1 10.0100 -8.9128 -1.2418 37 1 11.8198 -7.8831 -0.0716 38 1 6.7502 -8.5592 0.4944 39 1 7.5061 -9.4763 -0.8799 40 1 4.6441 -4.5469 -4.3712 41 1 1.7806 -0.5005 -4.5885 42 1 0.9743 0.6400 -2.6081 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16500644_11618758.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:00:50 Heat of formation + Delta-G solvation = -31.873421 kcal Electronic energy + Delta-G solvation = -28409.725560 eV Core-core repulsion = 24080.710724 eV Total energy + Delta-G solvation = -4329.014836 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 336.132 amu Computer time = 0.94 seconds Orbital eigenvalues (eV) -48.71656 -43.30108 -40.62126 -39.87805 -39.29297 -37.30775 -37.26521 -35.37071 -34.21672 -32.10843 -30.95351 -29.65749 -27.65653 -27.16257 -26.69063 -24.93874 -23.60529 -23.08583 -22.81111 -21.23223 -20.33280 -19.09148 -18.59866 -18.35674 -18.03456 -17.79425 -17.33102 -17.01252 -16.86185 -16.69004 -16.52807 -15.98583 -15.88792 -15.70602 -15.60986 -15.43677 -14.97731 -14.71578 -14.55724 -14.25209 -14.20638 -14.02688 -13.86537 -13.56179 -13.41932 -13.18322 -12.87342 -12.45373 -12.39576 -12.20625 -12.16773 -11.96501 -11.59923 -11.52996 -11.41086 -10.97248 -10.83289 -10.81082 -10.33476 -10.10764 -8.77998 -5.18846 -0.57019 -0.15777 0.99429 1.05999 1.12183 1.57176 1.87026 2.05146 2.12103 2.58284 2.89069 3.03307 3.08265 3.15248 3.18242 3.20950 3.33147 3.38259 3.44339 3.64078 3.81699 3.83946 3.97020 4.10885 4.16106 4.22496 4.23473 4.33221 4.33920 4.43699 4.48918 4.50972 4.52540 4.59718 4.65179 4.73296 4.80974 4.94231 5.05957 5.13945 5.22431 5.24616 5.39958 5.63449 6.30067 6.37233 6.54444 6.59201 7.34122 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.531 6.531 2 C -0.069 4.069 3 Si 0.699 3.301 4 C -0.068 4.068 5 C -0.097 4.097 6 C 0.170 3.830 7 C -0.317 4.317 8 C 0.604 3.396 9 O -0.549 6.549 10 N -0.727 5.727 11 C 0.124 3.876 12 C 0.079 3.921 13 F -0.195 7.195 14 C -0.146 4.146 15 C -0.109 4.109 16 H 0.107 0.893 17 C 0.087 3.913 18 O -0.573 6.573 19 C -0.141 4.141 20 C 0.122 3.878 21 N -0.312 5.312 22 N -0.267 5.267 23 C 0.123 3.877 24 C -0.157 4.157 25 H 0.378 0.622 26 H 0.123 0.877 27 H -0.247 1.247 28 H -0.254 1.254 29 H 0.161 0.839 30 H 0.403 0.597 31 H 0.091 0.909 32 H 0.084 0.916 33 H 0.098 0.902 34 H 0.085 0.915 35 H 0.051 0.949 36 H 0.049 0.951 37 H 0.382 0.618 38 H 0.089 0.911 39 H 0.102 0.898 40 H 0.199 0.801 41 H 0.180 0.820 42 H 0.167 0.833 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.684 1.157 -2.756 3.066 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.337 6.337 2 C -0.178 4.178 3 Si 0.598 3.402 4 C -0.073 4.073 5 C -0.116 4.116 6 C 0.050 3.950 7 C -0.332 4.332 8 C 0.393 3.607 9 O -0.428 6.428 10 N -0.379 5.379 11 C 0.000 4.000 12 C 0.061 3.939 13 F -0.176 7.176 14 C -0.183 4.183 15 C -0.127 4.127 16 H 0.125 0.875 17 C 0.009 3.991 18 O -0.379 6.379 19 C -0.180 4.180 20 C -0.059 4.059 21 N -0.132 5.132 22 N -0.031 5.031 23 C -0.004 4.004 24 C -0.178 4.178 25 H 0.226 0.774 26 H 0.140 0.860 27 H -0.171 1.171 28 H -0.179 1.179 29 H 0.179 0.821 30 H 0.238 0.762 31 H 0.109 0.891 32 H 0.102 0.898 33 H 0.117 0.883 34 H 0.104 0.896 35 H 0.069 0.931 36 H 0.068 0.932 37 H 0.230 0.770 38 H 0.108 0.892 39 H 0.121 0.879 40 H 0.216 0.784 41 H 0.197 0.803 42 H 0.184 0.816 Dipole moment (debyes) X Y Z Total from point charges 0.333 2.436 -2.198 3.298 hybrid contribution 0.844 -1.749 0.208 1.953 sum 1.177 0.687 -1.990 2.412 Atomic orbital electron populations 1.86609 1.16308 1.81656 1.49093 1.25172 0.85595 1.10347 0.96712 0.95005 0.81484 0.75951 0.87749 1.20510 0.95918 0.94957 0.95945 1.20705 0.98320 0.94512 0.98093 1.19247 0.95537 0.94030 0.86236 1.19547 1.16274 1.03804 0.93533 1.16792 0.77278 0.79256 0.87362 1.90794 1.61637 1.71829 1.18532 1.45478 1.53110 1.29147 1.10198 1.21569 0.97503 0.90260 0.90673 1.22587 0.91097 0.94132 0.86125 1.92862 1.82072 1.85014 1.57602 1.23730 0.92961 1.03542 0.98110 1.22383 0.93016 0.99038 0.98258 0.87500 1.22110 0.86137 0.91096 0.99765 1.86483 1.17893 1.37203 1.96308 1.23607 0.95912 0.98488 0.99953 1.24085 0.94223 0.95679 0.91930 1.77648 1.18501 1.06393 1.10640 1.46101 1.32138 1.19057 1.05757 1.21605 0.91766 0.85031 1.01951 1.20718 1.04214 1.02692 0.90217 0.77402 0.85988 1.17064 1.17862 0.82142 0.76245 0.89099 0.89825 0.88343 0.89637 0.93079 0.93228 0.77039 0.89228 0.87920 0.78444 0.80307 0.81554 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 0.54 12.88 -35.23 -0.45 0.09 16 2 C -0.07 0.08 2.84 36.01 0.10 0.19 16 3 Si 0.70 -1.54 31.96 -169.99 -5.43 -6.98 16 4 C -0.07 0.04 4.53 -104.54 -0.47 -0.43 16 5 C -0.10 -0.22 9.35 -39.53 -0.37 -0.59 16 6 C 0.17 0.57 6.76 -84.07 -0.57 0.00 16 7 C -0.32 -1.03 6.17 -104.68 -0.65 -1.68 16 8 C 0.60 2.37 7.78 -12.90 -0.10 2.27 16 9 O -0.55 -3.80 15.71 5.16 0.08 -3.72 16 10 N -0.73 -0.80 5.44 -61.65 -0.34 -1.14 16 11 C 0.12 0.05 5.27 -4.05 -0.02 0.03 16 12 C 0.08 -0.05 1.91 -89.81 -0.17 -0.22 16 13 F -0.20 -0.24 16.61 2.25 0.04 -0.20 16 14 C -0.15 0.16 7.06 -25.92 -0.18 -0.02 16 15 C -0.11 0.14 3.66 -89.81 -0.33 -0.19 16 16 H 0.11 -0.07 7.72 -51.93 -0.40 -0.47 16 17 C 0.09 -0.13 6.89 37.16 0.26 0.13 16 18 O -0.57 -0.07 13.66 -35.23 -0.48 -0.55 16 19 C -0.14 0.26 7.12 -25.92 -0.18 0.08 16 20 C 0.12 0.18 11.44 -17.14 -0.20 -0.02 16 21 N -0.31 -0.91 12.57 30.75 0.39 -0.52 16 22 N -0.27 -0.57 3.86 -10.55 -0.04 -0.61 16 23 C 0.12 -0.19 11.17 -16.68 -0.19 -0.38 16 24 C -0.16 0.50 8.38 -39.95 -0.33 0.17 16 25 H 0.38 -2.19 8.08 45.56 0.37 -1.82 16 26 H 0.12 -0.05 7.71 -51.93 -0.40 -0.45 16 27 H -0.25 -0.24 7.11 56.52 0.40 0.16 16 28 H -0.25 -0.29 7.11 56.52 0.40 0.11 16 29 H 0.16 0.48 7.01 -52.49 -0.37 0.11 16 30 H 0.40 -0.34 6.95 -40.82 -0.28 -0.62 16 31 H 0.09 0.04 7.39 -51.93 -0.38 -0.34 16 32 H 0.08 0.08 8.14 -51.93 -0.42 -0.34 16 33 H 0.10 -0.13 7.90 -51.93 -0.41 -0.54 16 34 H 0.08 -0.06 8.10 -51.93 -0.42 -0.48 16 35 H 0.05 -0.12 8.14 -51.93 -0.42 -0.54 16 36 H 0.05 -0.11 7.85 -51.93 -0.41 -0.52 16 37 H 0.38 -1.52 9.12 45.56 0.42 -1.10 16 38 H 0.09 -0.22 8.10 -51.93 -0.42 -0.64 16 39 H 0.10 -0.24 8.10 -51.93 -0.42 -0.66 16 40 H 0.20 -0.49 7.46 -52.49 -0.39 -0.88 16 41 H 0.18 -0.83 8.06 -52.49 -0.42 -1.25 16 42 H 0.17 -1.31 7.31 -52.49 -0.38 -1.69 16 LS Contribution 360.35 15.07 5.43 5.43 Total: 0.00 -12.27 360.35 -8.59 -20.86 By element: Atomic # 1 Polarization: -7.61 SS G_CDS: -4.37 Total: -11.98 kcal Atomic # 6 Polarization: 2.73 SS G_CDS: -3.41 Total: -0.67 kcal Atomic # 7 Polarization: -2.28 SS G_CDS: 0.01 Total: -2.27 kcal Atomic # 8 Polarization: -3.33 SS G_CDS: -0.85 Total: -4.19 kcal Atomic # 9 Polarization: -0.24 SS G_CDS: 0.04 Total: -0.20 kcal Atomic # 14 Polarization: -1.54 SS G_CDS: -5.43 Total: -6.98 kcal Total LS contribution 5.43 Total: 5.43 kcal Total: -12.27 -8.59 -20.86 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16500644_11618758.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -11.018 kcal (2) G-P(sol) polarization free energy of solvation -12.269 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -23.287 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.586 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.855 kcal (6) G-S(sol) free energy of system = (1) + (5) -31.873 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.95 seconds