Wall clock time and date at job start Sun Mar 7 2021 09:00:56 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42910 * 1 3 3 C 1.35655 * 116.99390 * 2 1 4 4 C 1.38394 * 120.12852 * 0.24066 * 3 2 1 5 5 C 1.38725 * 120.03501 * 180.27288 * 4 3 2 6 6 O 1.35718 * 119.86207 * 179.76130 * 5 4 3 7 7 C 1.42894 * 117.00143 * 359.97438 * 6 5 4 8 8 C 1.39144 * 120.27496 * 359.74401 * 5 4 3 9 9 C 1.50700 * 119.88106 * 179.97438 * 8 5 4 10 10 O 1.42896 * 109.47160 * 75.02023 * 9 8 5 11 11 Si 1.86299 * 109.47043 * 195.02000 * 9 8 5 12 12 C 1.37581 * 120.23787 * 359.97438 * 8 5 4 13 13 C 1.39820 * 119.96418 * 0.02562 * 12 8 5 14 14 C 1.47308 * 120.13527 * 179.97438 * 13 12 8 15 15 O 1.21620 * 119.99926 * 179.97438 * 14 13 12 16 16 N 1.34773 * 119.99730 * 0.02562 * 14 13 12 17 17 C 1.46506 * 119.99741 * 180.02562 * 16 14 13 18 18 C 1.53002 * 109.46889 * 179.97438 * 17 16 14 19 19 F 1.39901 * 112.85061 * 48.80476 * 18 17 16 20 20 C 1.53777 * 113.61002 * 179.97438 * 18 17 16 21 21 C 1.53781 * 87.08336 * 89.11664 * 20 18 17 22 22 H 1.09002 * 113.61228 * 270.88201 * 21 20 18 23 23 C 1.53000 * 113.61707 * 140.06298 * 21 20 18 24 24 O 1.42898 * 109.47043 * 176.53192 * 23 21 20 25 25 C 1.53775 * 113.61584 * 277.49246 * 18 17 16 26 26 H 1.08996 * 109.46535 * 299.99461 * 1 2 3 27 27 H 1.08994 * 109.47416 * 59.99603 * 1 2 3 28 28 H 1.09001 * 109.46547 * 180.02562 * 1 2 3 29 29 H 1.08004 * 119.98152 * 0.03806 * 4 3 2 30 30 H 1.09002 * 109.47220 * 299.99733 * 7 6 5 31 31 H 1.08992 * 109.47490 * 59.99830 * 7 6 5 32 32 H 1.09001 * 109.47028 * 179.97438 * 7 6 5 33 33 H 1.08999 * 109.47069 * 315.01863 * 9 8 5 34 34 H 0.96704 * 114.00022 * 299.99299 * 10 9 8 35 35 H 1.48502 * 109.99857 * 59.99585 * 11 9 8 36 36 H 1.48496 * 110.00302 * 181.31914 * 11 9 8 37 37 H 1.08001 * 120.02107 * 180.02562 * 12 8 5 38 38 H 0.96995 * 120.00500 * 359.97438 * 16 14 13 39 39 H 1.09001 * 109.47319 * 59.99915 * 17 16 14 40 40 H 1.08995 * 109.46703 * 299.99823 * 17 16 14 41 41 H 1.08997 * 113.61941 * 334.56371 * 20 18 17 42 42 H 1.09009 * 113.68972 * 203.67450 * 20 18 17 43 43 H 1.09001 * 109.47043 * 296.52693 * 23 21 20 44 44 H 1.08992 * 109.47277 * 56.52863 * 23 21 20 45 45 H 0.96703 * 113.99884 * 180.02562 * 24 23 21 46 46 H 1.08993 * 113.61636 * 156.33278 * 25 18 17 47 47 H 1.09008 * 113.61006 * 25.43521 * 25 18 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4291 0.0000 0.0000 3 6 2.0448 1.2088 0.0000 4 6 1.2936 2.3710 0.0050 5 6 1.9252 3.6061 -0.0007 6 8 1.1850 4.7437 -0.0006 7 6 -0.2359 4.5931 0.0049 8 6 3.3145 3.6835 -0.0061 9 6 3.9914 5.0299 -0.0129 10 8 3.8992 5.6160 1.2870 11 14 5.7843 4.8212 -0.4742 12 6 4.0724 2.5353 -0.0053 13 6 3.4461 1.2852 0.0004 14 6 4.2539 0.0533 0.0007 15 8 3.7066 -1.0327 0.0062 16 7 5.5995 0.1299 -0.0041 17 6 6.4029 -1.0952 -0.0043 18 6 7.8888 -0.7306 -0.0108 19 9 8.2178 0.2257 0.9559 20 6 8.8227 -1.9523 -0.0109 21 6 8.7508 -1.9086 -1.5464 22 1 7.9278 -2.4904 -1.9616 23 6 10.0879 -2.1983 -2.2312 24 8 9.9037 -2.2150 -3.6482 25 6 8.4380 -0.4085 -1.4105 26 1 -0.3632 0.5137 0.8900 27 1 -0.3634 0.5139 -0.8899 28 1 -0.3632 -1.0277 0.0005 29 1 0.2149 2.3165 0.0096 30 1 -0.5464 4.0418 -0.8827 31 1 -0.5399 4.0459 0.8972 32 1 -0.7056 5.5767 0.0048 33 1 3.5025 5.6787 -0.7396 34 1 2.9922 5.7543 1.5927 35 1 5.8939 4.2124 -1.8242 36 1 6.4707 6.1378 -0.4535 37 1 5.1505 2.5994 -0.0092 38 1 6.0360 0.9961 -0.0080 39 1 6.1694 -1.6826 -0.8923 40 1 6.1755 -1.6789 0.8876 41 1 8.3731 -2.8458 0.4221 42 1 9.8165 -1.7439 0.3857 43 1 10.8068 -1.4225 -1.9675 44 1 10.4623 -3.1676 -1.9021 45 1 10.7121 -2.3937 -4.1478 46 1 9.3261 0.2232 -1.3964 47 1 7.6775 -0.0559 -2.1074 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16500644_12297780.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:00:56 Heat of formation + Delta-G solvation = -182.815881 kcal Electronic energy + Delta-G solvation = -32873.680337 eV Core-core repulsion = 28132.522244 eV Total energy + Delta-G solvation = -4741.158093 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 356.156 amu Computer time = 1.13 seconds Orbital eigenvalues (eV) -48.65484 -42.15805 -40.75445 -40.14231 -39.68867 -38.42422 -37.20070 -37.02993 -35.51677 -32.29675 -32.08023 -29.89060 -29.01252 -28.25919 -27.13923 -26.86156 -26.10745 -24.43853 -22.97928 -22.64216 -21.54882 -20.38524 -19.94715 -18.79983 -18.60260 -18.21644 -18.01443 -17.48988 -17.23067 -17.17713 -16.75259 -16.69430 -16.59372 -16.36850 -15.96184 -15.83975 -15.77911 -15.60355 -15.55184 -14.97816 -14.80601 -14.36475 -14.30606 -14.19680 -14.10128 -13.76762 -13.53705 -13.43637 -13.29101 -12.74414 -12.69348 -12.56786 -12.54492 -12.30039 -12.21604 -12.07088 -11.69998 -11.50214 -11.37689 -11.30449 -11.26044 -10.94361 -10.79328 -10.26553 -9.96733 -9.24332 -4.96241 -0.33398 0.03680 1.33350 1.56197 1.68763 1.92996 1.95888 2.02299 2.13377 2.54964 3.06667 3.16789 3.29657 3.31417 3.41517 3.48631 3.52921 3.65366 3.70121 3.91261 3.96536 4.06109 4.14145 4.19819 4.24409 4.26365 4.28644 4.30066 4.33319 4.40995 4.42835 4.57820 4.62269 4.64662 4.66536 4.71772 4.72251 4.72819 4.79329 4.86346 4.95878 4.97514 5.07072 5.22574 5.28945 5.38635 5.95036 6.22253 6.41092 6.60404 6.91175 7.13670 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.009 3.991 2 O -0.303 6.303 3 C 0.218 3.782 4 C -0.305 4.305 5 C 0.207 3.793 6 O -0.317 6.317 7 C 0.012 3.988 8 C -0.199 4.199 9 C -0.070 4.070 10 O -0.546 6.546 11 Si 0.789 3.211 12 C 0.007 3.993 13 C -0.226 4.226 14 C 0.566 3.434 15 O -0.559 6.559 16 N -0.720 5.720 17 C 0.122 3.878 18 C 0.079 3.921 19 F -0.202 7.202 20 C -0.133 4.133 21 C -0.111 4.111 22 H 0.097 0.903 23 C 0.084 3.916 24 O -0.598 6.598 25 C -0.145 4.145 26 H 0.073 0.927 27 H 0.072 0.928 28 H 0.114 0.886 29 H 0.168 0.832 30 H 0.068 0.932 31 H 0.072 0.928 32 H 0.123 0.877 33 H 0.074 0.926 34 H 0.374 0.626 35 H -0.254 1.254 36 H -0.289 1.289 37 H 0.159 0.841 38 H 0.411 0.589 39 H 0.090 0.910 40 H 0.079 0.921 41 H 0.095 0.905 42 H 0.113 0.887 43 H 0.060 0.940 44 H 0.060 0.940 45 H 0.397 0.603 46 H 0.107 0.893 47 H 0.080 0.920 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.303 0.531 -0.353 0.706 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.085 4.085 2 O -0.214 6.214 3 C 0.169 3.831 4 C -0.324 4.324 5 C 0.160 3.840 6 O -0.229 6.229 7 C -0.082 4.082 8 C -0.200 4.200 9 C -0.178 4.178 10 O -0.353 6.353 11 Si 0.690 3.310 12 C -0.011 4.011 13 C -0.230 4.230 14 C 0.355 3.645 15 O -0.439 6.439 16 N -0.374 5.374 17 C -0.002 4.002 18 C 0.060 3.940 19 F -0.182 7.182 20 C -0.171 4.171 21 C -0.129 4.129 22 H 0.115 0.885 23 C 0.007 3.993 24 O -0.406 6.406 25 C -0.182 4.182 26 H 0.091 0.909 27 H 0.090 0.910 28 H 0.132 0.868 29 H 0.185 0.815 30 H 0.086 0.914 31 H 0.090 0.910 32 H 0.141 0.859 33 H 0.091 0.909 34 H 0.223 0.777 35 H -0.179 1.179 36 H -0.216 1.216 37 H 0.176 0.824 38 H 0.248 0.752 39 H 0.108 0.892 40 H 0.097 0.903 41 H 0.114 0.886 42 H 0.132 0.868 43 H 0.078 0.922 44 H 0.078 0.922 45 H 0.247 0.753 46 H 0.125 0.875 47 H 0.098 0.902 Dipole moment (debyes) X Y Z Total from point charges 0.085 0.083 -0.752 0.762 hybrid contribution -1.504 0.890 -0.381 1.789 sum -1.420 0.973 -1.134 2.061 Atomic orbital electron populations 1.23496 0.76375 1.05872 1.02720 1.86369 1.23329 1.25735 1.85979 1.18941 0.90886 0.84914 0.88407 1.21419 1.02118 0.90573 1.18329 1.18859 0.90503 0.85266 0.89413 1.86038 1.21484 1.28501 1.86855 1.23500 0.75728 1.06134 1.02788 1.19542 0.90897 0.96801 1.12796 1.25372 1.13834 0.90303 0.88308 1.86691 1.33123 1.83306 1.32140 0.92579 0.73762 0.83281 0.81409 1.20830 0.99595 0.89128 0.91589 1.19129 0.91022 0.93608 1.19260 1.17984 0.82106 0.88509 0.75879 1.90821 1.72206 1.30039 1.50814 1.45634 1.05395 1.10452 1.75896 1.21621 0.87031 0.87399 1.04164 1.22589 0.93926 0.89543 0.87918 1.92857 1.93417 1.66116 1.65833 1.23577 1.00801 0.97313 0.95367 1.22376 0.98859 0.96645 0.95019 0.88525 1.22194 0.95791 1.00870 0.80467 1.86439 1.40055 1.95334 1.18787 1.23750 1.02686 0.97714 0.94096 0.90885 0.90970 0.86819 0.81504 0.91350 0.90970 0.85866 0.90883 0.77689 1.17927 1.21635 0.82405 0.75157 0.89199 0.90315 0.88593 0.86833 0.92158 0.92200 0.75336 0.87492 0.90162 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.01 9.81 113.37 1.11 1.10 16 2 O -0.30 -2.59 8.56 -68.74 -0.59 -3.17 16 3 C 0.22 1.46 6.69 22.82 0.15 1.61 16 4 C -0.31 -0.45 8.01 22.42 0.18 -0.27 16 5 C 0.21 0.41 6.62 22.60 0.15 0.56 16 6 O -0.32 0.19 9.36 -90.39 -0.85 -0.65 16 7 C 0.01 -0.09 9.80 113.37 1.11 1.02 16 8 C -0.20 -0.54 5.27 -19.80 -0.10 -0.65 16 9 C -0.07 -0.16 2.32 71.24 0.17 0.00 16 10 O -0.55 -1.94 12.65 -148.98 -1.89 -3.82 16 11 Si 0.79 0.42 30.16 68.60 2.07 2.49 16 12 C 0.01 0.02 8.14 22.50 0.18 0.20 16 13 C -0.23 -1.55 5.89 -20.00 -0.12 -1.67 16 14 C 0.57 5.38 7.76 86.63 0.67 6.05 16 15 O -0.56 -9.51 15.15 16.87 0.26 -9.26 16 16 N -0.72 -2.30 5.42 -466.48 -2.53 -4.83 16 17 C 0.12 0.19 5.24 86.38 0.45 0.65 16 18 C 0.08 -0.12 1.83 -10.27 -0.02 -0.14 16 19 F -0.20 -0.30 16.82 44.97 0.76 0.46 16 20 C -0.13 0.60 7.12 31.12 0.22 0.83 16 21 C -0.11 0.31 3.66 -10.25 -0.04 0.28 16 22 H 0.10 -0.08 7.65 -2.39 -0.02 -0.10 16 23 C 0.08 -0.31 6.88 71.98 0.49 0.18 16 24 O -0.60 0.03 13.66 -148.98 -2.03 -2.01 16 25 C -0.14 0.37 7.10 31.14 0.22 0.59 16 26 H 0.07 -0.36 7.65 -2.39 -0.02 -0.38 16 27 H 0.07 -0.35 7.67 -2.39 -0.02 -0.37 16 28 H 0.11 -0.38 8.14 -2.39 -0.02 -0.40 16 29 H 0.17 -0.70 4.50 -2.91 -0.01 -0.72 16 30 H 0.07 -0.60 7.65 -2.39 -0.02 -0.62 16 31 H 0.07 -0.67 7.65 -2.39 -0.02 -0.69 16 32 H 0.12 -1.30 8.14 -2.39 -0.02 -1.32 16 33 H 0.07 0.18 7.82 -2.39 -0.02 0.16 16 34 H 0.37 -0.22 8.59 -74.05 -0.64 -0.86 16 35 H -0.25 -0.48 7.11 99.48 0.71 0.22 16 36 H -0.29 -2.02 7.11 99.48 0.71 -1.32 16 37 H 0.16 -0.47 3.43 -2.91 -0.01 -0.48 16 38 H 0.41 -0.55 6.20 -92.71 -0.58 -1.12 16 39 H 0.09 0.18 7.34 -2.39 -0.02 0.17 16 40 H 0.08 0.23 8.14 -2.39 -0.02 0.21 16 41 H 0.10 -0.55 8.10 -2.39 -0.02 -0.57 16 42 H 0.11 -0.72 8.10 -2.38 -0.02 -0.74 16 43 H 0.06 -0.36 7.88 -2.39 -0.02 -0.38 16 44 H 0.06 -0.34 8.14 -2.39 -0.02 -0.36 16 45 H 0.40 -3.26 9.12 -74.06 -0.68 -3.94 16 46 H 0.11 -0.42 7.92 -2.39 -0.02 -0.44 16 47 H 0.08 -0.11 8.10 -2.38 -0.02 -0.13 16 Total: 0.00 -23.85 386.07 -0.76 -24.60 By element: Atomic # 1 Polarization: -13.35 SS G_CDS: -0.80 Total: -14.15 kcal Atomic # 6 Polarization: 5.51 SS G_CDS: 4.84 Total: 10.35 kcal Atomic # 7 Polarization: -2.30 SS G_CDS: -2.53 Total: -4.83 kcal Atomic # 8 Polarization: -13.82 SS G_CDS: -5.10 Total: -18.92 kcal Atomic # 9 Polarization: -0.30 SS G_CDS: 0.76 Total: 0.46 kcal Atomic # 14 Polarization: 0.42 SS G_CDS: 2.07 Total: 2.49 kcal Total: -23.85 -0.76 -24.60 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16500644_12297780.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -158.213 kcal (2) G-P(sol) polarization free energy of solvation -23.845 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -182.058 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.758 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.603 kcal (6) G-S(sol) free energy of system = (1) + (5) -182.816 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.14 seconds