Wall clock time and date at job start Sun Mar 7 2021 09:01:00 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42907 * 1 3 3 Si 1.86298 * 109.46858 * 2 1 4 4 C 1.50699 * 109.46603 * 119.99410 * 2 1 3 5 5 C 1.38423 * 119.89080 * 244.73044 * 4 2 1 6 6 C 1.38251 * 120.33871 * 179.72328 * 5 4 2 7 7 C 1.38274 * 120.11794 * 0.55079 * 6 5 4 8 8 F 1.35095 * 120.11300 * 179.74320 * 7 6 5 9 9 C 1.39868 * 119.78089 * 359.72647 * 7 6 5 10 10 C 1.47686 * 120.16910 * 180.02562 * 9 7 6 11 11 O 1.21570 * 120.00127 * 359.96932 * 10 9 7 12 12 N 1.34779 * 120.00302 * 179.97438 * 10 9 7 13 13 C 1.46492 * 120.00213 * 179.97438 * 12 10 9 14 14 C 1.53002 * 109.47270 * 179.97438 * 13 12 10 15 15 F 1.39903 * 112.84797 * 314.66649 * 14 13 12 16 16 C 1.53777 * 113.61630 * 85.86238 * 14 13 12 17 17 C 1.54047 * 86.98709 * 89.16192 * 16 14 13 18 18 H 1.08997 * 113.61419 * 270.88755 * 17 16 14 19 19 C 1.52996 * 113.69512 * 139.98911 * 17 16 14 20 20 O 1.42902 * 109.47166 * 87.46911 * 19 17 16 21 21 C 1.53780 * 113.61647 * 183.47216 * 14 13 12 22 22 C 1.37896 * 119.89376 * 65.00227 * 4 2 1 23 23 H 0.96697 * 114.00527 * 300.00583 * 1 2 3 24 24 H 1.08996 * 109.47455 * 239.99290 * 2 1 3 25 25 H 1.48506 * 109.99834 * 178.67912 * 3 2 1 26 26 H 1.48502 * 110.00011 * 299.99177 * 3 2 1 27 27 H 1.08000 * 119.82972 * 359.97438 * 5 4 2 28 28 H 1.08002 * 119.94255 * 180.29396 * 6 5 4 29 29 H 0.97003 * 119.99682 * 359.97438 * 12 10 9 30 30 H 1.09005 * 109.47474 * 299.99567 * 13 12 10 31 31 H 1.09002 * 109.47438 * 59.99312 * 13 12 10 32 32 H 1.09002 * 113.61792 * 203.66981 * 16 14 13 33 33 H 1.08997 * 113.61313 * 334.56785 * 16 14 13 34 34 H 1.09006 * 109.47135 * 207.47049 * 19 17 16 35 35 H 1.08997 * 109.47279 * 327.46760 * 19 17 16 36 36 H 0.96695 * 114.00096 * 179.97438 * 20 19 17 37 37 H 1.09006 * 113.61385 * 25.43289 * 21 14 13 38 38 H 1.08998 * 113.61630 * 156.32983 * 21 14 13 39 39 H 1.07997 * 120.06149 * 359.97438 * 22 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7103 1.2306 5 6 2.6442 -0.0102 2.1885 6 6 3.1043 -0.6513 3.3237 7 6 2.8643 -2.0011 3.5037 8 9 3.3185 -2.6286 4.6105 9 6 2.1495 -2.7146 2.5361 10 6 1.8878 -4.1565 2.7199 11 8 2.2945 -4.7262 3.7138 12 7 1.1981 -4.8407 1.7857 13 6 0.9390 -6.2710 1.9677 14 6 0.1432 -6.8012 0.7733 15 9 -0.9191 -5.9648 0.4139 16 6 1.0235 -7.2240 -0.4146 17 6 1.0847 -8.6206 0.2326 18 1 1.9089 -8.7403 0.9357 19 6 0.9905 -9.7693 -0.7736 20 8 2.2971 -10.0872 -1.2572 21 6 -0.2552 -8.2805 0.9064 22 6 1.6840 -2.0568 1.3959 23 1 -0.3934 0.4417 0.7649 24 1 1.7924 -0.5139 -0.8899 25 1 3.5346 1.7703 0.0322 26 1 1.5616 2.4678 -1.2086 27 1 2.8384 1.0432 2.0504 28 1 3.6558 -0.0977 4.0693 29 1 0.8733 -4.3860 0.9928 30 1 1.8862 -6.8056 2.0398 31 1 0.3657 -6.4229 2.8822 32 1 0.5021 -7.2088 -1.3717 33 1 1.9862 -6.7141 -0.4479 34 1 0.5603 -10.6445 -0.2867 35 1 0.3570 -9.4699 -1.6085 36 1 2.3135 -10.8089 -1.9005 37 1 -0.3242 -8.6230 1.9390 38 1 -1.1257 -8.5536 0.3099 39 1 1.1310 -2.6015 0.6450 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16500644_12335834.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:01:00 Heat of formation + Delta-G solvation = -152.556039 kcal Electronic energy + Delta-G solvation = -26161.404463 eV Core-core repulsion = 21900.544182 eV Total energy + Delta-G solvation = -4260.860281 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 314.116 amu Computer time = 0.75 seconds Orbital eigenvalues (eV) -49.86525 -48.77253 -41.34072 -40.37772 -39.71720 -37.59635 -37.32976 -35.61600 -32.94896 -32.38284 -30.03999 -27.45245 -27.15025 -26.72801 -25.17708 -23.21936 -22.81298 -21.56993 -20.45738 -19.29767 -18.41860 -18.36380 -18.29348 -17.87533 -17.27944 -16.95893 -16.75510 -16.71267 -16.41332 -16.09991 -15.85503 -15.78679 -15.68864 -15.55467 -15.00935 -14.77687 -14.40540 -14.36589 -14.32891 -13.91460 -13.77943 -13.54224 -13.19870 -12.95246 -12.85491 -12.47158 -12.27331 -12.24381 -11.96854 -11.66291 -11.47667 -11.10583 -10.99059 -10.59307 -10.45877 -10.22358 -9.86379 -5.17265 -0.53421 -0.11576 1.12439 1.50051 1.63040 1.82774 1.86633 2.45822 2.84534 2.99132 3.01482 3.09804 3.11700 3.23241 3.32175 3.36767 3.44406 3.52887 3.75916 3.86173 3.99004 4.11372 4.19988 4.26666 4.27385 4.39059 4.40691 4.46442 4.48326 4.53313 4.58684 4.64660 4.74306 4.76717 4.84176 4.87743 5.02728 5.16595 5.20129 5.51816 6.27053 6.41544 6.56963 7.05102 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.537 6.537 2 C -0.067 4.067 3 Si 0.687 3.313 4 C -0.140 4.140 5 C -0.058 4.058 6 C -0.157 4.157 7 C 0.168 3.832 8 F -0.110 7.110 9 C -0.175 4.175 10 C 0.561 3.439 11 O -0.519 6.519 12 N -0.723 5.723 13 C 0.121 3.879 14 C 0.078 3.922 15 F -0.195 7.195 16 C -0.146 4.146 17 C -0.108 4.108 18 H 0.107 0.893 19 C 0.087 3.913 20 O -0.573 6.573 21 C -0.140 4.140 22 C -0.030 4.030 23 H 0.381 0.619 24 H 0.118 0.882 25 H -0.255 1.255 26 H -0.251 1.251 27 H 0.142 0.858 28 H 0.151 0.849 29 H 0.405 0.595 30 H 0.094 0.906 31 H 0.087 0.913 32 H 0.099 0.901 33 H 0.084 0.916 34 H 0.052 0.948 35 H 0.050 0.950 36 H 0.383 0.617 37 H 0.090 0.910 38 H 0.103 0.897 39 H 0.139 0.861 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.986 1.369 -2.421 3.418 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.343 6.343 2 C -0.178 4.178 3 Si 0.588 3.412 4 C -0.141 4.141 5 C -0.076 4.076 6 C -0.175 4.175 7 C 0.147 3.853 8 F -0.088 7.088 9 C -0.179 4.179 10 C 0.348 3.652 11 O -0.395 6.395 12 N -0.377 5.377 13 C -0.003 4.003 14 C 0.060 3.940 15 F -0.175 7.175 16 C -0.184 4.184 17 C -0.127 4.127 18 H 0.125 0.875 19 C 0.009 3.991 20 O -0.379 6.379 21 C -0.179 4.179 22 C -0.049 4.049 23 H 0.229 0.771 24 H 0.135 0.865 25 H -0.179 1.179 26 H -0.176 1.176 27 H 0.160 0.840 28 H 0.169 0.831 29 H 0.241 0.759 30 H 0.112 0.888 31 H 0.105 0.895 32 H 0.117 0.883 33 H 0.103 0.897 34 H 0.070 0.930 35 H 0.068 0.932 36 H 0.230 0.770 37 H 0.108 0.892 38 H 0.122 0.878 39 H 0.156 0.844 Dipole moment (debyes) X Y Z Total from point charges -0.972 1.700 -2.236 2.972 hybrid contribution -0.308 -0.943 -0.771 1.256 sum -1.280 0.757 -3.007 3.355 Atomic orbital electron populations 1.86532 1.16720 1.81668 1.49379 1.25061 0.85532 1.10275 0.96926 0.94800 0.81112 0.77539 0.87747 1.20340 1.01178 0.94570 0.98011 1.21087 0.94596 0.99733 0.92148 1.21173 1.03661 0.92580 1.00108 1.17735 0.93921 0.90437 0.83175 1.91631 1.85744 1.82280 1.49179 1.20010 1.05943 0.94372 0.97537 1.17940 0.78265 0.86019 0.82956 1.90882 1.50406 1.69860 1.28319 1.45659 1.57417 1.09992 1.24598 1.21644 1.00579 0.81196 0.96870 1.22588 0.85904 0.89278 0.96268 1.92873 1.58136 1.73809 1.92671 1.23783 1.00677 0.96308 0.97636 1.22433 0.98372 0.93787 0.98077 0.87474 1.22105 0.84586 0.96602 0.95818 1.86482 1.28882 1.58311 1.64206 1.23596 0.98422 0.92571 1.03273 1.21048 0.95045 0.93851 0.94930 0.77136 0.86505 1.17944 1.17606 0.84040 0.83147 0.75892 0.88815 0.89528 0.88260 0.89690 0.93025 0.93216 0.77005 0.89150 0.87826 0.84370 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.85 12.83 -35.23 -0.45 0.40 16 2 C -0.07 0.15 2.80 36.01 0.10 0.25 16 3 Si 0.69 -1.90 29.79 -169.99 -5.06 -6.96 16 4 C -0.14 0.23 5.35 -104.68 -0.56 -0.33 16 5 C -0.06 0.13 8.66 -39.51 -0.34 -0.21 16 6 C -0.16 0.14 10.01 -39.56 -0.40 -0.26 16 7 C 0.17 0.36 7.29 -38.96 -0.28 0.08 16 8 F -0.11 -0.54 15.55 2.25 0.04 -0.50 16 9 C -0.17 -0.30 5.88 -104.91 -0.62 -0.92 16 10 C 0.56 1.92 7.77 -12.40 -0.10 1.83 16 11 O -0.52 -3.73 15.34 5.30 0.08 -3.65 16 12 N -0.72 -0.54 5.40 -61.30 -0.33 -0.87 16 13 C 0.12 0.02 5.26 -4.04 -0.02 0.00 16 14 C 0.08 -0.06 1.88 -89.81 -0.17 -0.23 16 15 F -0.19 -0.23 16.67 2.25 0.04 -0.19 16 16 C -0.15 0.18 7.09 -25.78 -0.18 0.00 16 17 C -0.11 0.16 3.66 -89.67 -0.33 -0.17 16 18 H 0.11 -0.09 7.69 -51.93 -0.40 -0.49 16 19 C 0.09 -0.14 6.89 37.16 0.26 0.11 16 20 O -0.57 0.01 13.66 -35.23 -0.48 -0.47 16 21 C -0.14 0.29 7.13 -25.92 -0.18 0.11 16 22 C -0.03 0.02 9.17 -39.19 -0.36 -0.34 16 23 H 0.38 -2.02 8.70 45.56 0.40 -1.62 16 24 H 0.12 -0.23 7.96 -51.93 -0.41 -0.65 16 25 H -0.25 0.12 7.11 56.52 0.40 0.52 16 26 H -0.25 -0.20 7.11 56.52 0.40 0.20 16 27 H 0.14 -0.68 4.88 -52.49 -0.26 -0.93 16 28 H 0.15 -0.44 8.06 -52.49 -0.42 -0.86 16 29 H 0.40 -0.40 6.11 -40.82 -0.25 -0.65 16 30 H 0.09 0.01 7.37 -51.93 -0.38 -0.37 16 31 H 0.09 0.05 8.14 -51.93 -0.42 -0.37 16 32 H 0.10 -0.14 7.91 -51.93 -0.41 -0.56 16 33 H 0.08 -0.08 8.10 -51.93 -0.42 -0.50 16 34 H 0.05 -0.13 8.14 -51.93 -0.42 -0.55 16 35 H 0.05 -0.12 7.85 -51.93 -0.41 -0.53 16 36 H 0.38 -1.56 9.12 45.56 0.42 -1.15 16 37 H 0.09 -0.25 8.10 -51.93 -0.42 -0.67 16 38 H 0.10 -0.26 8.10 -51.93 -0.42 -0.69 16 39 H 0.14 -0.29 6.40 -52.49 -0.34 -0.62 16 LS Contribution 334.93 15.07 5.05 5.05 Total: 0.00 -9.70 334.93 -8.08 -17.78 By element: Atomic # 1 Polarization: -6.72 SS G_CDS: -3.77 Total: -10.49 kcal Atomic # 6 Polarization: 3.09 SS G_CDS: -3.18 Total: -0.09 kcal Atomic # 7 Polarization: -0.54 SS G_CDS: -0.33 Total: -0.87 kcal Atomic # 8 Polarization: -2.87 SS G_CDS: -0.85 Total: -3.72 kcal Atomic # 9 Polarization: -0.77 SS G_CDS: 0.07 Total: -0.69 kcal Atomic # 14 Polarization: -1.90 SS G_CDS: -5.06 Total: -6.96 kcal Total LS contribution 5.05 Total: 5.05 kcal Total: -9.70 -8.08 -17.78 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16500644_12335834.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -134.778 kcal (2) G-P(sol) polarization free energy of solvation -9.696 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -144.474 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.082 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.778 kcal (6) G-S(sol) free energy of system = (1) + (5) -152.556 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.75 seconds