Wall clock time and date at job start Sun Mar 7 2021 09:01:03 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86296 * 109.46924 * 2 1 4 4 C 1.50704 * 109.46672 * 119.99850 * 2 1 3 5 5 C 1.38234 * 119.99963 * 65.00082 * 4 2 1 6 6 C 1.38230 * 119.99794 * 180.02562 * 5 4 2 7 7 C 1.38236 * 119.99907 * 359.95588 * 6 5 4 8 8 C 1.50701 * 119.99722 * 180.02562 * 7 6 5 9 9 C 1.50703 * 109.47355 * 90.00138 * 8 7 6 10 10 O 1.21283 * 119.99488 * 359.97438 * 9 8 7 11 11 N 1.34777 * 120.00290 * 180.02562 * 9 8 7 12 12 C 1.46498 * 119.99828 * 180.27728 * 11 9 8 13 13 C 1.52996 * 109.47059 * 179.72339 * 12 11 9 14 14 F 1.39903 * 112.85025 * 316.19277 * 13 12 11 15 15 C 1.53782 * 113.61754 * 87.50116 * 13 12 11 16 16 C 1.53772 * 87.08242 * 89.11616 * 15 13 12 17 17 H 1.09003 * 113.61968 * 270.88905 * 16 15 13 18 18 C 1.53002 * 113.69124 * 139.99167 * 16 15 13 19 19 O 1.42898 * 109.47004 * 87.46502 * 18 16 15 20 20 C 1.53781 * 87.08335 * 25.43488 * 16 15 13 21 21 C 1.38228 * 120.00304 * 0.27825 * 7 6 5 22 22 C 1.38233 * 119.99808 * 359.53177 * 21 7 6 23 23 H 0.96696 * 114.00220 * 300.00370 * 1 2 3 24 24 H 1.08995 * 109.47121 * 239.99851 * 2 1 3 25 25 H 1.48503 * 109.99823 * 178.67964 * 3 2 1 26 26 H 1.48503 * 109.99972 * 299.99414 * 3 2 1 27 27 H 1.07999 * 120.00246 * 359.97438 * 5 4 2 28 28 H 1.08001 * 120.00128 * 179.97438 * 6 5 4 29 29 H 1.08998 * 109.47477 * 329.99984 * 8 7 6 30 30 H 1.09002 * 109.47412 * 210.00243 * 8 7 6 31 31 H 0.97001 * 119.99727 * 359.97438 * 11 9 8 32 32 H 1.09004 * 109.46963 * 299.72135 * 12 11 9 33 33 H 1.08994 * 109.47567 * 59.72287 * 12 11 9 34 34 H 1.09007 * 113.61436 * 203.66708 * 15 13 12 35 35 H 1.09001 * 113.61066 * 334.56483 * 15 13 12 36 36 H 1.09005 * 109.47193 * 207.46218 * 18 16 15 37 37 H 1.08992 * 109.47036 * 327.46591 * 18 16 15 38 38 H 0.96699 * 114.00614 * 179.97438 * 19 18 16 39 39 H 1.09001 * 113.61589 * 220.01997 * 20 16 15 40 40 H 1.08997 * 113.69425 * 89.12615 * 20 16 15 41 41 H 1.07997 * 120.00141 * 179.72528 * 21 7 6 42 42 H 1.07999 * 120.00191 * 180.21141 * 22 21 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 1.6846 -2.0602 1.3984 6 6 2.1448 -2.7116 2.5274 7 6 2.8525 -2.0135 3.4880 8 6 3.3547 -2.7239 4.7185 9 6 4.7361 -3.2666 4.4568 10 8 5.2608 -3.0938 3.3770 11 7 5.3879 -3.9447 5.4221 12 6 6.7331 -4.4669 5.1695 13 6 7.2450 -5.1838 6.4204 14 9 6.9830 -4.4755 7.5981 15 6 6.8428 -6.6666 6.4887 16 6 8.1382 -6.9722 5.7185 17 1 8.0178 -6.9503 4.6354 18 6 8.8646 -8.2258 6.2104 19 8 8.3513 -9.3720 5.5288 20 6 8.7007 -5.6654 6.3022 21 6 3.0950 -0.6628 3.3224 22 6 2.6382 -0.0121 2.1916 23 1 -0.3933 0.4417 0.7650 24 1 1.7923 -0.5138 -0.8899 25 1 3.5346 1.7703 0.0322 26 1 1.5615 2.4678 -1.2086 27 1 1.1316 -2.6055 0.6480 28 1 1.9518 -3.7661 2.6588 29 1 2.6820 -3.5457 4.9637 30 1 3.3916 -2.0235 5.5529 31 1 4.9680 -4.0831 6.2855 32 1 6.6999 -5.1689 4.3363 33 1 7.4026 -3.6427 4.9236 34 1 6.8314 -7.0697 7.5014 35 1 5.9368 -6.8994 5.9291 36 1 9.9315 -8.1304 6.0081 37 1 8.7068 -8.3399 7.2827 38 1 8.7673 -10.2046 5.7910 39 1 9.2946 -5.0900 5.5921 40 1 9.1977 -5.7934 7.2638 41 1 3.6440 -0.1165 4.0751 42 1 2.8305 1.0425 2.0606 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16500644_12335836.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:01:03 Heat of formation + Delta-G solvation = -117.782278 kcal Electronic energy + Delta-G solvation = -24957.672705 eV Core-core repulsion = 21012.236684 eV Total energy + Delta-G solvation = -3945.436021 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 310.141 amu Computer time = 0.74 seconds Orbital eigenvalues (eV) -48.79139 -41.18866 -40.42360 -39.83057 -37.62039 -37.33053 -35.49431 -34.04227 -31.90235 -30.71668 -29.37626 -27.31001 -27.07806 -25.41056 -23.77256 -22.98172 -22.20631 -21.34091 -20.36376 -18.49995 -18.40507 -18.24851 -17.79712 -17.25135 -16.80278 -16.77157 -16.66539 -16.26025 -15.96421 -15.83723 -15.72459 -15.55178 -15.03936 -14.72590 -14.61934 -14.52382 -14.34956 -13.98073 -13.95535 -13.59718 -13.20546 -13.05889 -12.95363 -12.80857 -12.47805 -12.25763 -12.16463 -11.92213 -11.67185 -11.64791 -11.48262 -11.02135 -10.94223 -10.37531 -10.21427 -9.82011 -9.58379 -4.99294 0.27960 0.50969 1.34937 1.61554 1.69794 1.97282 2.02983 2.78617 2.84419 3.00984 3.10659 3.12401 3.31904 3.49867 3.60622 3.75004 3.78621 3.85807 3.93898 4.05887 4.10698 4.19068 4.23055 4.28098 4.37714 4.39492 4.43976 4.46675 4.50118 4.52296 4.56955 4.58840 4.72506 4.74078 4.87381 5.02408 5.11276 5.16169 5.25777 5.41835 5.59097 5.62177 6.03955 6.36432 6.55412 6.61820 7.16144 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.540 6.540 2 C -0.068 4.068 3 Si 0.686 3.314 4 C -0.119 4.119 5 C -0.091 4.091 6 C -0.103 4.103 7 C -0.063 4.063 8 C -0.102 4.102 9 C 0.516 3.484 10 O -0.526 6.526 11 N -0.731 5.731 12 C 0.121 3.879 13 C 0.079 3.921 14 F -0.195 7.195 15 C -0.145 4.145 16 C -0.109 4.109 17 H 0.107 0.893 18 C 0.087 3.913 19 O -0.573 6.573 20 C -0.142 4.142 21 C -0.100 4.100 22 C -0.114 4.114 23 H 0.378 0.622 24 H 0.113 0.887 25 H -0.258 1.258 26 H -0.255 1.255 27 H 0.125 0.875 28 H 0.122 0.878 29 H 0.106 0.894 30 H 0.107 0.893 31 H 0.406 0.594 32 H 0.090 0.910 33 H 0.083 0.917 34 H 0.098 0.902 35 H 0.084 0.916 36 H 0.051 0.949 37 H 0.050 0.950 38 H 0.383 0.617 39 H 0.089 0.911 40 H 0.103 0.897 41 H 0.125 0.875 42 H 0.127 0.873 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.536 -1.429 6.221 6.406 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.345 6.345 2 C -0.179 4.179 3 Si 0.588 3.412 4 C -0.119 4.119 5 C -0.109 4.109 6 C -0.121 4.121 7 C -0.064 4.064 8 C -0.142 4.142 9 C 0.302 3.698 10 O -0.401 6.401 11 N -0.385 5.385 12 C -0.004 4.004 13 C 0.061 3.939 14 F -0.176 7.176 15 C -0.183 4.183 16 C -0.127 4.127 17 H 0.125 0.875 18 C 0.009 3.991 19 O -0.379 6.379 20 C -0.180 4.180 21 C -0.118 4.118 22 C -0.131 4.131 23 H 0.226 0.774 24 H 0.130 0.870 25 H -0.183 1.183 26 H -0.180 1.180 27 H 0.143 0.857 28 H 0.140 0.860 29 H 0.124 0.876 30 H 0.125 0.875 31 H 0.241 0.759 32 H 0.109 0.891 33 H 0.101 0.899 34 H 0.117 0.883 35 H 0.103 0.897 36 H 0.069 0.931 37 H 0.068 0.932 38 H 0.230 0.770 39 H 0.107 0.893 40 H 0.121 0.879 41 H 0.143 0.857 42 H 0.144 0.856 Dipole moment (debyes) X Y Z Total from point charges 1.119 -0.535 4.188 4.367 hybrid contribution 0.416 -1.135 0.748 1.421 sum 1.535 -1.669 4.935 5.431 Atomic orbital electron populations 1.86505 1.17124 1.81714 1.49204 1.25054 0.85174 1.10106 0.97581 0.94825 0.81201 0.78089 0.87063 1.20317 0.99790 0.95092 0.96707 1.20960 0.98722 0.93754 0.97437 1.21019 0.97769 0.99622 0.93739 1.19255 0.98035 0.93760 0.95330 1.20680 0.93832 1.01748 0.97957 1.20599 0.87519 0.77700 0.83959 1.90770 1.68382 1.56929 1.24066 1.45834 1.17476 1.57757 1.17413 1.21590 0.84275 0.99098 0.95400 1.22581 0.98292 0.90998 0.82061 1.92862 1.94990 1.80786 1.48920 1.23725 0.99296 0.92763 1.02497 1.22382 0.95894 0.93075 1.01339 0.87524 1.22107 0.96646 0.85193 0.95169 1.86480 1.66267 1.17548 1.67608 1.23609 0.94888 0.95991 1.03519 1.20915 0.99162 0.93958 0.97762 1.20918 0.98828 0.99134 0.94231 0.77433 0.86993 1.18274 1.18028 0.85664 0.85976 0.87560 0.87476 0.75944 0.89145 0.89920 0.88316 0.89682 0.93055 0.93209 0.76988 0.89263 0.87884 0.85734 0.85606 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.61 12.83 -35.23 -0.45 -1.06 16 2 C -0.07 -0.07 2.80 36.01 0.10 0.03 16 3 Si 0.69 0.05 29.80 -169.99 -5.07 -5.02 16 4 C -0.12 -0.19 5.35 -104.62 -0.56 -0.75 16 5 C -0.09 -0.18 9.69 -39.59 -0.38 -0.57 16 6 C -0.10 -0.16 9.70 -39.59 -0.38 -0.54 16 7 C -0.06 -0.07 4.37 -104.63 -0.46 -0.53 16 8 C -0.10 0.14 5.83 -29.03 -0.17 -0.03 16 9 C 0.52 0.67 7.82 -10.98 -0.09 0.58 16 10 O -0.53 -3.03 16.03 5.55 0.09 -2.94 16 11 N -0.73 0.53 5.45 -60.30 -0.33 0.20 16 12 C 0.12 -0.06 5.27 -4.04 -0.02 -0.08 16 13 C 0.08 -0.11 1.91 -89.81 -0.17 -0.28 16 14 F -0.20 -0.10 16.61 2.25 0.04 -0.06 16 15 C -0.15 0.25 7.06 -25.92 -0.18 0.06 16 16 C -0.11 0.18 3.66 -89.81 -0.33 -0.14 16 17 H 0.11 -0.11 7.72 -51.93 -0.40 -0.51 16 18 C 0.09 -0.16 6.89 37.16 0.26 0.10 16 19 O -0.57 0.12 13.66 -35.23 -0.48 -0.36 16 20 C -0.14 0.33 7.12 -25.92 -0.18 0.14 16 21 C -0.10 -0.10 9.70 -39.59 -0.38 -0.48 16 22 C -0.11 -0.11 8.67 -39.58 -0.34 -0.45 16 23 H 0.38 -1.08 8.70 45.56 0.40 -0.69 16 24 H 0.11 0.19 7.96 -51.93 -0.41 -0.23 16 25 H -0.26 -0.72 7.11 56.52 0.40 -0.32 16 26 H -0.26 -0.80 7.11 56.52 0.40 -0.40 16 27 H 0.13 0.18 8.06 -52.49 -0.42 -0.24 16 28 H 0.12 0.01 8.06 -52.49 -0.42 -0.42 16 29 H 0.11 -0.37 8.09 -51.93 -0.42 -0.79 16 30 H 0.11 -0.38 8.08 -51.93 -0.42 -0.80 16 31 H 0.41 -1.09 8.03 -40.82 -0.33 -1.42 16 32 H 0.09 -0.02 7.39 -51.93 -0.38 -0.40 16 33 H 0.08 0.02 8.14 -51.93 -0.42 -0.40 16 34 H 0.10 -0.19 7.90 -51.93 -0.41 -0.60 16 35 H 0.08 -0.12 8.10 -51.93 -0.42 -0.54 16 36 H 0.05 -0.14 8.14 -51.93 -0.42 -0.56 16 37 H 0.05 -0.13 7.85 -51.93 -0.41 -0.54 16 38 H 0.38 -1.64 9.12 45.56 0.42 -1.22 16 39 H 0.09 -0.25 8.10 -51.93 -0.42 -0.67 16 40 H 0.10 -0.28 8.10 -51.93 -0.42 -0.71 16 41 H 0.12 -0.10 8.06 -52.49 -0.42 -0.52 16 42 H 0.13 -0.13 4.91 -52.49 -0.26 -0.39 16 LS Contribution 354.94 15.07 5.35 5.35 Total: 0.00 -9.84 354.94 -9.35 -19.19 By element: Atomic # 1 Polarization: -7.16 SS G_CDS: -5.20 Total: -12.37 kcal Atomic # 6 Polarization: 0.37 SS G_CDS: -3.30 Total: -2.93 kcal Atomic # 7 Polarization: 0.53 SS G_CDS: -0.33 Total: 0.20 kcal Atomic # 8 Polarization: -3.52 SS G_CDS: -0.84 Total: -4.37 kcal Atomic # 9 Polarization: -0.10 SS G_CDS: 0.04 Total: -0.06 kcal Atomic # 14 Polarization: 0.05 SS G_CDS: -5.07 Total: -5.02 kcal Total LS contribution 5.35 Total: 5.35 kcal Total: -9.84 -9.35 -19.19 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16500644_12335836.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -98.590 kcal (2) G-P(sol) polarization free energy of solvation -9.838 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -108.428 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.354 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.192 kcal (6) G-S(sol) free energy of system = (1) + (5) -117.782 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.74 seconds