Wall clock time and date at job start Sun Mar 7 2021 09:01:28 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86294 * 109.47144 * 2 1 4 4 C 1.50694 * 109.47290 * 239.99805 * 2 1 3 5 5 C 1.38316 * 119.92287 * 119.97670 * 4 2 1 6 6 C 1.38471 * 120.28211 * 180.02562 * 5 4 2 7 7 Br 1.89105 * 119.93619 * 180.02562 * 6 5 4 8 8 C 1.38027 * 120.12377 * 359.74547 * 6 5 4 9 9 C 1.39578 * 119.84539 * 0.53112 * 8 6 5 10 10 C 1.47845 * 120.14319 * 179.74661 * 9 8 6 11 11 O 1.21551 * 120.00087 * 179.72694 * 10 9 8 12 12 N 1.34777 * 119.99799 * 359.72286 * 10 9 8 13 13 C 1.46498 * 120.00084 * 180.02562 * 12 10 9 14 14 C 1.52994 * 109.47472 * 179.97438 * 13 12 10 15 15 F 1.39895 * 112.90625 * 316.25073 * 14 13 12 16 16 C 1.53782 * 113.61379 * 87.49745 * 14 13 12 17 17 C 1.53962 * 87.11063 * 89.18901 * 16 14 13 18 18 H 1.08993 * 113.61598 * 270.84305 * 17 16 14 19 19 C 1.52999 * 113.66529 * 139.88900 * 17 16 14 20 20 O 1.42904 * 109.47219 * 87.55249 * 19 17 16 21 21 C 1.53781 * 113.61652 * 184.99725 * 14 13 12 22 22 C 1.37990 * 119.92258 * 299.99973 * 4 2 1 23 23 H 0.96700 * 113.99548 * 60.00192 * 1 2 3 24 24 H 1.09004 * 109.46821 * 120.00078 * 2 1 3 25 25 H 1.48504 * 110.00171 * 60.00085 * 3 2 1 26 26 H 1.48502 * 109.99936 * 181.31910 * 3 2 1 27 27 H 1.08000 * 119.86110 * 359.97438 * 5 4 2 28 28 H 1.08011 * 120.07516 * 180.25199 * 8 6 5 29 29 H 0.96993 * 120.00140 * 359.97438 * 12 10 9 30 30 H 1.09001 * 109.47367 * 59.99555 * 13 12 10 31 31 H 1.09007 * 109.47028 * 299.99629 * 13 12 10 32 32 H 1.08997 * 113.61668 * 203.66451 * 16 14 13 33 33 H 1.08994 * 113.61387 * 334.57186 * 16 14 13 34 34 H 1.09002 * 109.47053 * 207.55709 * 19 17 16 35 35 H 1.09004 * 109.47121 * 327.55345 * 19 17 16 36 36 H 0.96699 * 113.99884 * 179.97438 * 20 19 17 37 37 H 1.09002 * 113.61445 * 25.43321 * 21 14 13 38 38 H 1.09002 * 113.61408 * 156.25051 * 21 14 13 39 39 H 1.08000 * 120.05976 * 0.02765 * 22 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9314 -0.7104 -1.2304 5 6 2.7261 -0.0366 -2.1400 6 6 3.1913 -0.6819 -3.2734 7 35 4.2778 0.2485 -4.5102 8 6 2.8683 -2.0048 -3.4990 9 6 2.0619 -2.6882 -2.5875 10 6 1.7073 -4.1036 -2.8256 11 8 1.0089 -4.6976 -2.0275 12 7 2.1582 -4.7351 -3.9275 13 6 1.8063 -6.1374 -4.1638 14 6 2.4406 -6.6087 -5.4738 15 9 2.3122 -5.6751 -6.5078 16 6 3.8704 -7.1496 -5.3064 17 6 3.2355 -8.5300 -5.0576 18 1 3.0014 -8.7205 -4.0103 19 6 3.9946 -9.6830 -5.7174 20 8 5.0166 -10.1482 -4.8335 21 6 2.0324 -8.0353 -5.8777 22 6 1.5971 -2.0315 -1.4471 23 1 -0.3932 0.4417 -0.7651 24 1 1.7923 -0.5139 0.8900 25 1 1.5615 2.4679 1.2085 26 1 3.5346 1.7702 -0.0321 27 1 2.9842 0.9976 -1.9661 28 1 3.2350 -2.5086 -4.3813 29 1 2.7151 -4.2609 -4.5645 30 1 0.7226 -6.2340 -4.2298 31 1 2.1760 -6.7485 -3.3402 32 1 4.4649 -7.1020 -6.2187 33 1 4.3915 -6.7449 -4.4388 34 1 3.3026 -10.4971 -5.9333 35 1 4.4477 -9.3355 -6.6459 36 1 5.5390 -10.8809 -5.1873 37 1 1.0697 -8.3455 -5.4713 38 1 2.1230 -8.2293 -6.9465 39 1 0.9758 -2.5560 -0.7362 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16500644_12335870.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:01:28 Heat of formation + Delta-G solvation = -106.499015 kcal Electronic energy + Delta-G solvation = -25420.117314 eV Core-core repulsion = 21290.890188 eV Total energy + Delta-G solvation = -4129.227126 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 374.036 amu Computer time = 0.75 seconds Orbital eigenvalues (eV) -48.81046 -41.58573 -40.44425 -39.75592 -37.73259 -37.35799 -35.70760 -33.64644 -33.23696 -30.51070 -30.15223 -27.59759 -27.19800 -27.00008 -24.82101 -23.00122 -22.82301 -21.51676 -20.46373 -19.21998 -18.40198 -18.21363 -17.73170 -17.57256 -17.18159 -16.80983 -16.73308 -16.39589 -16.10186 -15.96838 -15.76661 -15.54528 -15.04566 -14.99444 -14.75515 -14.57350 -14.30994 -14.11934 -13.91654 -13.50541 -13.34099 -13.03789 -12.94302 -12.49566 -12.26921 -12.21126 -11.98721 -11.95564 -11.69471 -11.51398 -11.47935 -11.15852 -11.00710 -10.64641 -10.40157 -10.20557 -9.95326 -5.15423 -0.54591 -0.20782 0.37785 1.13040 1.49422 1.55717 1.79054 1.88794 2.46050 2.82140 2.97527 3.06835 3.08669 3.19581 3.28551 3.32159 3.41526 3.70840 3.76039 3.81092 3.92871 4.08786 4.16927 4.18484 4.21914 4.24286 4.37082 4.40588 4.44654 4.46327 4.50780 4.56563 4.69869 4.73438 4.84794 4.89627 5.02883 5.12282 5.16580 5.35446 6.22557 6.44832 6.55655 6.98634 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.535 6.535 2 C -0.067 4.067 3 Si 0.684 3.316 4 C -0.120 4.120 5 C -0.063 4.063 6 C -0.094 4.094 7 Br -0.032 7.032 8 C -0.053 4.053 9 C -0.127 4.127 10 C 0.564 3.436 11 O -0.525 6.525 12 N -0.723 5.723 13 C 0.120 3.880 14 C 0.078 3.922 15 F -0.195 7.195 16 C -0.146 4.146 17 C -0.108 4.108 18 H 0.107 0.893 19 C 0.087 3.913 20 O -0.573 6.573 21 C -0.141 4.141 22 C -0.016 4.016 23 H 0.381 0.619 24 H 0.121 0.879 25 H -0.248 1.248 26 H -0.253 1.253 27 H 0.142 0.858 28 H 0.139 0.861 29 H 0.405 0.595 30 H 0.087 0.913 31 H 0.094 0.906 32 H 0.099 0.901 33 H 0.085 0.915 34 H 0.051 0.949 35 H 0.050 0.950 36 H 0.383 0.617 37 H 0.090 0.910 38 H 0.103 0.897 39 H 0.149 0.851 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.246 -0.447 -4.361 4.557 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.340 6.340 2 C -0.178 4.178 3 Si 0.586 3.414 4 C -0.121 4.121 5 C -0.083 4.083 6 C -0.173 4.173 7 Br 0.054 6.946 8 C -0.074 4.074 9 C -0.131 4.131 10 C 0.351 3.649 11 O -0.401 6.401 12 N -0.377 5.377 13 C -0.004 4.004 14 C 0.059 3.941 15 F -0.175 7.175 16 C -0.184 4.184 17 C -0.127 4.127 18 H 0.125 0.875 19 C 0.009 3.991 20 O -0.379 6.379 21 C -0.179 4.179 22 C -0.036 4.036 23 H 0.228 0.772 24 H 0.138 0.862 25 H -0.173 1.173 26 H -0.178 1.178 27 H 0.159 0.841 28 H 0.156 0.844 29 H 0.241 0.759 30 H 0.105 0.895 31 H 0.113 0.887 32 H 0.118 0.882 33 H 0.103 0.897 34 H 0.070 0.930 35 H 0.068 0.932 36 H 0.230 0.770 37 H 0.108 0.892 38 H 0.122 0.878 39 H 0.167 0.833 Dipole moment (debyes) X Y Z Total from point charges 1.471 0.244 -2.930 3.287 hybrid contribution 0.404 -1.000 -0.543 1.207 sum 1.875 -0.756 -3.472 4.018 Atomic orbital electron populations 1.86548 1.16543 1.81638 1.49283 1.25084 0.85665 1.10166 0.96871 0.94806 0.81243 0.77594 0.87807 1.20381 0.99262 0.94886 0.97561 1.21229 0.95267 0.99836 0.91969 1.21646 1.02930 0.95607 0.97162 1.96849 1.65708 1.75336 1.56693 1.21303 0.95047 0.92604 0.98400 1.19894 1.01928 0.94066 0.97260 1.18071 0.79772 0.86005 0.81065 1.90835 1.37096 1.67063 1.45134 1.45698 1.54254 1.12817 1.24896 1.21664 1.01267 0.82328 0.95100 1.22580 0.98977 0.87171 0.85337 1.92867 1.96862 1.67943 1.59813 1.23775 0.94877 0.95578 1.04171 1.22416 0.95483 0.93559 1.01223 0.87463 1.22106 0.89596 0.95571 0.91840 1.86482 1.49662 1.55793 1.45957 1.23600 0.99501 0.92439 1.02334 1.21293 0.94389 0.92905 0.94967 0.77165 0.86163 1.17269 1.17782 0.84057 0.84364 0.75882 0.89466 0.88749 0.88249 0.89658 0.93030 0.93207 0.76986 0.89167 0.87830 0.83309 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 0.17 12.76 -35.23 -0.45 -0.28 16 2 C -0.07 0.06 2.82 36.00 0.10 0.16 16 3 Si 0.68 -1.17 29.78 -169.99 -5.06 -6.23 16 4 C -0.12 0.06 5.38 -104.69 -0.56 -0.51 16 5 C -0.06 0.06 8.41 -39.47 -0.33 -0.27 16 6 C -0.09 0.04 6.22 -39.57 -0.25 -0.21 16 7 Br -0.03 0.01 33.69 -68.01 -2.29 -2.28 16 8 C -0.05 0.03 9.28 -39.16 -0.36 -0.33 16 9 C -0.13 -0.10 5.87 -104.97 -0.62 -0.72 16 10 C 0.56 1.24 7.77 -12.33 -0.10 1.14 16 11 O -0.52 -2.96 16.35 5.32 0.09 -2.87 16 12 N -0.72 0.08 5.40 -61.25 -0.33 -0.25 16 13 C 0.12 -0.07 5.27 -4.05 -0.02 -0.10 16 14 C 0.08 -0.11 1.91 -89.81 -0.17 -0.28 16 15 F -0.19 -0.10 16.61 2.25 0.04 -0.06 16 16 C -0.15 0.25 7.07 -25.82 -0.18 0.07 16 17 C -0.11 0.21 3.67 -89.71 -0.33 -0.12 16 18 H 0.11 -0.14 7.73 -51.93 -0.40 -0.55 16 19 C 0.09 -0.17 6.89 37.16 0.26 0.09 16 20 O -0.57 0.17 13.66 -35.23 -0.48 -0.31 16 21 C -0.14 0.36 7.12 -25.92 -0.18 0.17 16 22 C -0.02 -0.02 9.15 -39.18 -0.36 -0.37 16 23 H 0.38 -1.61 8.70 45.56 0.40 -1.21 16 24 H 0.12 -0.07 7.96 -51.93 -0.41 -0.49 16 25 H -0.25 -0.38 7.11 56.52 0.40 0.02 16 26 H -0.25 -0.11 7.11 56.52 0.40 0.29 16 27 H 0.14 -0.34 4.86 -52.49 -0.26 -0.59 16 28 H 0.14 -0.34 6.41 -52.48 -0.34 -0.68 16 29 H 0.40 -0.70 6.06 -40.82 -0.25 -0.94 16 30 H 0.09 -0.02 8.14 -51.93 -0.42 -0.44 16 31 H 0.09 -0.06 7.40 -51.93 -0.38 -0.45 16 32 H 0.10 -0.19 7.90 -51.93 -0.41 -0.60 16 33 H 0.08 -0.12 8.10 -51.93 -0.42 -0.54 16 34 H 0.05 -0.15 8.14 -51.93 -0.42 -0.57 16 35 H 0.05 -0.14 7.85 -51.93 -0.41 -0.55 16 36 H 0.38 -1.66 9.12 45.56 0.42 -1.24 16 37 H 0.09 -0.29 8.10 -51.93 -0.42 -0.71 16 38 H 0.10 -0.31 8.10 -51.93 -0.42 -0.73 16 39 H 0.15 0.27 7.65 -52.49 -0.40 -0.13 16 LS Contribution 351.50 15.07 5.30 5.30 Total: 0.00 -8.31 351.50 -10.05 -18.36 By element: Atomic # 1 Polarization: -6.34 SS G_CDS: -3.75 Total: -10.09 kcal Atomic # 6 Polarization: 1.83 SS G_CDS: -3.11 Total: -1.28 kcal Atomic # 7 Polarization: 0.08 SS G_CDS: -0.33 Total: -0.25 kcal Atomic # 8 Polarization: -2.63 SS G_CDS: -0.84 Total: -3.47 kcal Atomic # 9 Polarization: -0.10 SS G_CDS: 0.04 Total: -0.06 kcal Atomic # 14 Polarization: -1.17 SS G_CDS: -5.06 Total: -6.23 kcal Atomic # 35 Polarization: 0.01 SS G_CDS: -2.29 Total: -2.28 kcal Total LS contribution 5.30 Total: 5.30 kcal Total: -8.31 -10.05 -18.36 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16500644_12335870.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -88.136 kcal (2) G-P(sol) polarization free energy of solvation -8.313 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -96.448 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.051 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.363 kcal (6) G-S(sol) free energy of system = (1) + (5) -106.499 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.75 seconds