Wall clock time and date at job start Sun Mar 7 2021 09:01:35 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42899 * 1 3 3 Si 1.86298 * 109.47235 * 2 1 4 4 C 1.50693 * 109.47408 * 239.99735 * 2 1 3 5 5 C 1.38411 * 119.82838 * 300.00328 * 4 2 1 6 6 C 1.37887 * 120.17365 * 180.02562 * 5 4 2 7 7 C 1.39840 * 119.82292 * 359.97438 * 6 5 4 8 8 C 1.47205 * 120.16606 * 180.02562 * 7 6 5 9 9 C 1.34808 * 119.99889 * 179.97438 * 8 7 6 10 10 C 1.46427 * 120.00060 * 179.72394 * 9 8 7 11 11 O 1.21703 * 119.99940 * 0.27909 * 10 9 8 12 12 N 1.34777 * 120.00208 * 180.27992 * 10 9 8 13 13 C 1.46499 * 120.00065 * 180.02562 * 12 10 9 14 14 C 1.53004 * 109.47198 * 179.97438 * 13 12 10 15 15 F 1.39900 * 112.84832 * 48.80297 * 14 13 12 16 16 C 1.53777 * 113.61269 * 180.02562 * 14 13 12 17 17 C 1.53784 * 87.07916 * 139.98244 * 16 14 13 18 18 H 1.09007 * 113.61325 * 220.01772 * 17 16 14 19 19 C 1.52998 * 113.61748 * 89.19871 * 17 16 14 20 20 O 1.42905 * 109.47130 * 175.00136 * 19 17 16 21 21 C 1.53784 * 113.61010 * 277.49800 * 14 13 12 22 22 C 1.39834 * 119.66270 * 0.27327 * 7 6 5 23 23 C 1.37893 * 119.82299 * 359.45168 * 22 7 6 24 24 H 0.96703 * 113.99467 * 60.00178 * 1 2 3 25 25 H 1.09003 * 109.46902 * 119.99470 * 2 1 3 26 26 H 1.48505 * 110.00262 * 59.99501 * 3 2 1 27 27 H 1.48495 * 110.00184 * 181.31551 * 3 2 1 28 28 H 1.07996 * 119.90895 * 359.97438 * 5 4 2 29 29 H 1.07999 * 120.08716 * 179.97438 * 6 5 4 30 30 H 1.08001 * 120.00393 * 0.02562 * 8 7 6 31 31 H 1.08002 * 120.00248 * 0.02562 * 9 8 7 32 32 H 0.97000 * 120.00140 * 359.97438 * 12 10 9 33 33 H 1.09000 * 109.47602 * 299.99940 * 13 12 10 34 34 H 1.08998 * 109.47492 * 59.99952 * 13 12 10 35 35 H 1.09002 * 113.61191 * 254.52809 * 16 14 13 36 36 H 1.08996 * 113.61890 * 25.43396 * 16 14 13 37 37 H 1.08998 * 109.47042 * 294.99949 * 19 17 16 38 38 H 1.09000 * 109.47165 * 55.00210 * 19 17 16 39 39 H 0.96699 * 113.99771 * 180.02562 * 20 19 17 40 40 H 1.08996 * 113.61648 * 334.56267 * 21 14 13 41 41 H 1.09005 * 113.61361 * 105.47107 * 21 14 13 42 42 H 1.07997 * 120.08770 * 179.69916 * 22 7 6 43 43 H 1.08006 * 119.91208 * 180.27114 * 23 22 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9314 -0.7104 -1.2304 5 6 1.5948 -2.0356 -1.4458 6 6 2.0510 -2.6927 -2.5689 7 6 2.8553 -2.0165 -3.4917 8 6 3.3460 -2.7105 -4.6936 9 6 4.1207 -2.0553 -5.5812 10 6 4.6138 -2.7474 -6.7736 11 8 4.3201 -3.9127 -6.9660 12 7 5.3930 -2.0939 -7.6582 13 6 5.8859 -2.7862 -8.8515 14 6 6.7397 -1.8259 -9.6821 15 9 7.6973 -1.1507 -8.9177 16 6 7.3077 -2.4580 -10.9637 17 6 7.0009 -1.1236 -11.6638 18 1 6.6035 -1.2408 -12.6721 19 6 8.1492 -0.1151 -11.5913 20 8 7.8177 1.0405 -12.3638 21 6 5.9164 -0.9035 -10.5965 22 6 3.1952 -0.6793 -3.2643 23 6 2.7265 -0.0344 -2.1393 24 1 -0.3932 0.4417 -0.7651 25 1 1.7923 -0.5138 0.8901 26 1 1.5614 2.4680 1.2085 27 1 3.5346 1.7703 -0.0320 28 1 0.9739 -2.5564 -0.7320 29 1 1.7879 -3.7268 -2.7355 30 1 3.0847 -3.7444 -4.8647 31 1 4.3816 -1.0213 -5.4103 32 1 5.6268 -1.1651 -7.5051 33 1 6.4895 -3.6428 -8.5514 34 1 5.0404 -3.1288 -9.4481 35 1 8.3722 -2.6850 -10.9038 36 1 6.7161 -3.2935 -11.3378 37 1 8.3121 0.1759 -10.5536 38 1 9.0571 -0.5692 -11.9882 39 1 8.5023 1.7235 -12.3634 40 1 4.9446 -1.3142 -10.8703 41 1 5.8572 0.1250 -10.2401 42 1 3.8199 -0.1520 -3.9700 43 1 2.9845 0.9997 -1.9644 There are 59 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 59 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16500644_12360594.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:01:35 Heat of formation + Delta-G solvation = -95.342792 kcal Electronic energy + Delta-G solvation = -25734.819509 eV Core-core repulsion = 21662.130396 eV Total energy + Delta-G solvation = -4072.689112 eV No. of doubly occupied orbitals = 59 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 322.141 amu Computer time = 0.84 seconds Orbital eigenvalues (eV) -48.97605 -40.93160 -40.50445 -39.86008 -37.84438 -37.25680 -35.61344 -35.06581 -32.32283 -31.52584 -30.23601 -27.62876 -27.20244 -26.53986 -24.23725 -23.83325 -22.85079 -21.97985 -20.69407 -20.14500 -18.93992 -18.58029 -18.17044 -17.66964 -17.17791 -16.94368 -16.83106 -16.47511 -16.29089 -16.10500 -15.86422 -15.65316 -15.43887 -15.28635 -15.06735 -14.65582 -14.64156 -14.27168 -14.16505 -13.88803 -13.71870 -13.57455 -13.35596 -13.32034 -13.04408 -12.56414 -12.29294 -12.05868 -11.91501 -11.77205 -11.65309 -11.42342 -11.37711 -10.99529 -10.85678 -10.50017 -10.19609 -10.07232 -9.30481 -5.10159 -0.59755 0.30474 0.86869 1.22375 1.56733 1.91492 2.03402 2.25917 2.75337 2.85301 2.98492 3.07738 3.17362 3.35585 3.37008 3.50213 3.59310 3.73353 3.77977 3.81338 4.08480 4.09947 4.15188 4.24959 4.28109 4.34689 4.36744 4.40247 4.44310 4.48167 4.53118 4.56693 4.71973 4.75349 4.78603 4.88575 4.96667 5.01143 5.06672 5.13018 5.27923 5.33050 5.40336 5.54044 5.80982 6.41475 6.49780 6.59817 7.18208 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.539 6.539 2 C -0.071 4.071 3 Si 0.689 3.311 4 C -0.107 4.107 5 C -0.095 4.095 6 C -0.092 4.092 7 C -0.074 4.074 8 C -0.014 4.014 9 C -0.214 4.214 10 C 0.550 3.450 11 O -0.543 6.543 12 N -0.724 5.724 13 C 0.113 3.887 14 C 0.077 3.923 15 F -0.184 7.184 16 C -0.141 4.141 17 C -0.111 4.111 18 H 0.096 0.904 19 C 0.085 3.915 20 O -0.573 6.573 21 C -0.146 4.146 22 C -0.095 4.095 23 C -0.120 4.120 24 H 0.380 0.620 25 H 0.115 0.885 26 H -0.254 1.254 27 H -0.258 1.258 28 H 0.131 0.869 29 H 0.132 0.868 30 H 0.138 0.862 31 H 0.131 0.869 32 H 0.405 0.595 33 H 0.081 0.919 34 H 0.090 0.910 35 H 0.088 0.912 36 H 0.110 0.890 37 H 0.058 0.942 38 H 0.050 0.950 39 H 0.383 0.617 40 H 0.104 0.896 41 H 0.085 0.915 42 H 0.132 0.868 43 H 0.130 0.870 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.833 3.413 -2.384 4.245 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.344 6.344 2 C -0.182 4.182 3 Si 0.591 3.409 4 C -0.108 4.108 5 C -0.113 4.113 6 C -0.110 4.110 7 C -0.074 4.074 8 C -0.033 4.033 9 C -0.235 4.235 10 C 0.339 3.661 11 O -0.422 6.422 12 N -0.376 5.376 13 C -0.011 4.011 14 C 0.058 3.942 15 F -0.164 7.164 16 C -0.179 4.179 17 C -0.130 4.130 18 H 0.115 0.885 19 C 0.007 3.993 20 O -0.379 6.379 21 C -0.183 4.183 22 C -0.113 4.113 23 C -0.137 4.137 24 H 0.227 0.773 25 H 0.133 0.867 26 H -0.179 1.179 27 H -0.183 1.183 28 H 0.149 0.851 29 H 0.150 0.850 30 H 0.156 0.844 31 H 0.149 0.851 32 H 0.240 0.760 33 H 0.099 0.901 34 H 0.109 0.891 35 H 0.106 0.894 36 H 0.129 0.871 37 H 0.076 0.924 38 H 0.069 0.931 39 H 0.230 0.770 40 H 0.123 0.877 41 H 0.104 0.896 42 H 0.150 0.850 43 H 0.147 0.853 Dipole moment (debyes) X Y Z Total from point charges 0.694 2.536 -1.638 3.098 hybrid contribution 0.965 0.182 0.381 1.053 sum 1.659 2.718 -1.258 3.424 Atomic orbital electron populations 1.86515 1.16929 1.81693 1.49286 1.25102 0.85387 1.10212 0.97489 0.94710 0.80952 0.77933 0.87292 1.20532 0.98269 0.95233 0.96745 1.20994 0.99041 0.93796 0.97458 1.21468 0.96015 1.00088 0.93394 1.19062 0.99256 0.93983 0.95062 1.22412 0.91130 0.99596 0.90196 1.22854 1.03563 1.01177 0.95910 1.18328 0.78147 0.86407 0.83211 1.90845 1.58081 1.16585 1.76647 1.45701 1.52366 1.16074 1.23484 1.21796 0.98019 0.94866 0.86438 1.22230 0.88370 0.93665 0.89886 1.92846 1.65255 1.81282 1.77065 1.23566 1.03436 0.97744 0.93198 1.22253 0.96043 0.94250 1.00430 0.88533 1.22064 0.95773 0.86142 0.95291 1.86448 1.48032 1.29979 1.73448 1.23654 0.98646 1.00909 0.95130 1.21364 0.98925 0.93787 0.97217 1.20958 0.98561 0.99574 0.94618 0.77287 0.86735 1.17902 1.18259 0.85130 0.85033 0.84419 0.85114 0.76007 0.90071 0.89137 0.89367 0.87120 0.92396 0.93133 0.76974 0.87729 0.89586 0.85035 0.85264 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.10 12.76 -35.23 -0.45 -0.35 16 2 C -0.07 0.05 2.82 36.00 0.10 0.15 16 3 Si 0.69 -1.05 29.77 -169.99 -5.06 -6.11 16 4 C -0.11 0.04 5.40 -104.50 -0.56 -0.52 16 5 C -0.09 0.00 9.59 -39.65 -0.38 -0.38 16 6 C -0.09 0.01 9.80 -39.11 -0.38 -0.37 16 7 C -0.07 0.00 5.87 -105.06 -0.62 -0.61 16 8 C -0.01 0.00 9.46 -37.16 -0.35 -0.36 16 9 C -0.21 0.05 9.41 -37.50 -0.35 -0.31 16 10 C 0.55 1.08 7.74 -12.96 -0.10 0.98 16 11 O -0.54 -3.15 16.23 5.19 0.08 -3.06 16 12 N -0.72 0.24 5.46 -61.70 -0.34 -0.10 16 13 C 0.11 -0.08 5.37 -4.04 -0.02 -0.10 16 14 C 0.08 -0.12 1.66 -89.81 -0.15 -0.27 16 15 F -0.18 -0.05 15.02 2.25 0.03 -0.01 16 16 C -0.14 0.33 7.13 -25.92 -0.18 0.15 16 17 C -0.11 0.14 4.19 -89.83 -0.38 -0.24 16 18 H 0.10 -0.08 8.14 -51.93 -0.42 -0.51 16 19 C 0.08 -0.06 6.66 37.16 0.25 0.18 16 20 O -0.57 -0.20 13.66 -35.23 -0.48 -0.69 16 21 C -0.15 0.26 7.07 -25.94 -0.18 0.07 16 22 C -0.10 0.10 9.41 -39.11 -0.37 -0.27 16 23 C -0.12 0.13 8.65 -39.65 -0.34 -0.21 16 24 H 0.38 -1.53 8.70 45.56 0.40 -1.13 16 25 H 0.12 -0.03 7.96 -51.93 -0.41 -0.44 16 26 H -0.25 -0.48 7.11 56.52 0.40 -0.08 16 27 H -0.26 -0.19 7.11 56.52 0.40 0.21 16 28 H 0.13 -0.06 8.06 -52.49 -0.42 -0.49 16 29 H 0.13 -0.20 8.06 -52.49 -0.42 -0.62 16 30 H 0.14 0.12 7.52 -52.49 -0.39 -0.28 16 31 H 0.13 -0.38 6.07 -52.49 -0.32 -0.70 16 32 H 0.41 -0.91 8.17 -40.82 -0.33 -1.24 16 33 H 0.08 0.02 8.14 -51.93 -0.42 -0.40 16 34 H 0.09 -0.09 7.94 -51.93 -0.41 -0.50 16 35 H 0.09 -0.21 8.10 -51.93 -0.42 -0.63 16 36 H 0.11 -0.41 8.10 -51.93 -0.42 -0.83 16 37 H 0.06 -0.04 6.32 -51.93 -0.33 -0.37 16 38 H 0.05 -0.08 8.14 -51.93 -0.42 -0.50 16 39 H 0.38 -1.42 9.12 45.56 0.42 -1.01 16 40 H 0.10 -0.27 7.96 -51.93 -0.41 -0.69 16 41 H 0.09 -0.10 8.10 -51.93 -0.42 -0.52 16 42 H 0.13 -0.41 6.17 -52.49 -0.32 -0.74 16 43 H 0.13 -0.38 4.85 -52.48 -0.25 -0.63 16 LS Contribution 362.96 15.07 5.47 5.47 Total: 0.00 -9.28 362.96 -9.72 -19.00 By element: Atomic # 1 Polarization: -7.12 SS G_CDS: -4.95 Total: -12.07 kcal Atomic # 6 Polarization: 1.94 SS G_CDS: -4.03 Total: -2.09 kcal Atomic # 7 Polarization: 0.24 SS G_CDS: -0.34 Total: -0.10 kcal Atomic # 8 Polarization: -3.25 SS G_CDS: -0.85 Total: -4.10 kcal Atomic # 9 Polarization: -0.05 SS G_CDS: 0.03 Total: -0.01 kcal Atomic # 14 Polarization: -1.05 SS G_CDS: -5.06 Total: -6.11 kcal Total LS contribution 5.47 Total: 5.47 kcal Total: -9.28 -9.72 -19.00 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16500644_12360594.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -76.342 kcal (2) G-P(sol) polarization free energy of solvation -9.280 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -85.622 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.721 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.001 kcal (6) G-S(sol) free energy of system = (1) + (5) -95.343 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.84 seconds