Wall clock time and date at job start Sun Mar 7 2021 09:01:38 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42898 * 1 3 3 Si 1.86297 * 109.46869 * 2 1 4 4 C 1.50701 * 109.47297 * 119.99625 * 2 1 3 5 5 C 1.38621 * 119.84089 * 75.00144 * 4 2 1 6 6 F 1.35093 * 119.91563 * 359.97438 * 5 4 2 7 7 C 1.38105 * 120.16417 * 179.97438 * 5 4 2 8 8 C 1.39619 * 119.85335 * 0.02562 * 7 5 4 9 9 C 1.47697 * 120.15691 * 179.97438 * 8 7 5 10 10 O 1.21567 * 120.00007 * 179.97438 * 9 8 7 11 11 N 1.34777 * 119.99880 * 0.02562 * 9 8 7 12 12 C 1.46500 * 120.00148 * 179.97438 * 11 9 8 13 13 C 1.53003 * 109.47195 * 179.97438 * 12 11 9 14 14 F 1.39897 * 112.84853 * 316.20183 * 13 12 11 15 15 C 1.53782 * 113.68757 * 87.46615 * 13 12 11 16 16 C 1.53780 * 87.07780 * 139.99118 * 15 13 12 17 17 H 1.09004 * 113.69037 * 220.00629 * 16 15 13 18 18 C 1.52999 * 113.61263 * 89.11550 * 16 15 13 19 19 O 1.42903 * 109.47256 * 87.50448 * 18 16 15 20 20 C 1.53776 * 87.08254 * 334.56594 * 16 15 13 21 21 C 1.39847 * 119.68816 * 0.27775 * 8 7 5 22 22 F 1.35107 * 120.08041 * 179.72382 * 21 8 7 23 23 C 1.38224 * 119.84651 * 254.98183 * 4 2 1 24 24 H 0.96703 * 114.00482 * 299.99372 * 1 2 3 25 25 H 1.08994 * 109.47074 * 239.99891 * 2 1 3 26 26 H 1.48508 * 109.99994 * 299.99956 * 3 2 1 27 27 H 1.48504 * 110.00078 * 61.31554 * 3 2 1 28 28 H 1.07998 * 120.07210 * 180.02562 * 7 5 4 29 29 H 0.97001 * 119.99606 * 359.97438 * 11 9 8 30 30 H 1.09003 * 109.46810 * 60.00192 * 12 11 9 31 31 H 1.08992 * 109.47295 * 300.00230 * 12 11 9 32 32 H 1.08997 * 113.61384 * 25.44226 * 15 13 12 33 33 H 1.08997 * 113.61292 * 254.53939 * 15 13 12 34 34 H 1.08997 * 109.47286 * 327.50008 * 18 16 15 35 35 H 1.09008 * 109.47201 * 207.49789 * 18 16 15 36 36 H 0.96700 * 114.00311 * 180.02562 * 19 18 16 37 37 H 1.09006 * 113.61047 * 139.98212 * 20 16 15 38 38 H 1.09000 * 113.61971 * 270.79888 * 20 16 15 39 39 H 1.08006 * 119.92296 * 0.02562 * 23 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7564 0.0000 4 6 1.9314 -0.7103 1.2305 5 6 1.8679 -2.0932 1.3029 6 9 1.3559 -2.7991 0.2711 7 6 2.3269 -2.7510 2.4271 8 6 2.8553 -2.0201 3.4929 9 6 3.3476 -2.7167 4.6986 10 8 3.8076 -2.0774 5.6247 11 7 3.2877 -4.0611 4.7718 12 6 3.7765 -4.7522 5.9675 13 6 3.5942 -6.2614 5.7946 14 9 2.3486 -6.5999 5.2552 15 6 4.7769 -6.9503 5.0935 16 6 4.5970 -8.1034 6.0949 17 1 5.5371 -8.5165 6.4607 18 6 3.6195 -9.1805 5.6202 19 8 4.3215 -10.1503 4.8400 20 6 3.9648 -7.0740 7.0465 21 6 2.9105 -0.6248 3.4159 22 9 3.4152 0.0907 4.4449 23 6 2.4536 0.0201 2.2814 24 1 -0.3934 0.4416 0.7651 25 1 1.7923 -0.5138 -0.8899 26 1 1.5613 2.4679 -1.2086 27 1 1.5877 2.4586 1.2242 28 1 2.2771 -3.8285 2.4818 29 1 2.9210 -4.5711 4.0326 30 1 3.2125 -4.4158 6.8375 31 1 4.8334 -4.5275 6.1105 32 1 5.7213 -6.4178 5.2058 33 1 4.5687 -7.2319 4.0613 34 1 2.8395 -8.7211 5.0130 35 1 3.1677 -9.6675 6.4844 36 1 3.7626 -10.8647 4.5047 37 1 3.1010 -7.4556 7.5909 38 1 4.6870 -6.5764 7.6937 39 1 2.4999 1.0973 2.2184 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16500644_12360598.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:01:38 Heat of formation + Delta-G solvation = -189.606538 kcal Electronic energy + Delta-G solvation = -28574.724971 eV Core-core repulsion = 23842.804084 eV Total energy + Delta-G solvation = -4731.920887 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 332.107 amu Computer time = 0.73 seconds Orbital eigenvalues (eV) -50.10509 -50.00885 -49.05487 -41.34173 -40.18682 -39.75385 -37.83543 -37.27575 -35.79579 -33.54052 -31.43392 -30.44122 -28.08323 -27.25665 -26.72959 -24.49656 -23.87479 -22.91199 -21.91002 -20.39049 -19.84857 -19.04442 -18.69125 -18.45845 -18.01658 -17.46070 -17.35109 -17.21134 -16.91193 -16.77764 -16.48620 -16.31733 -16.09307 -15.98945 -15.87869 -15.61791 -15.47195 -15.37426 -15.10835 -14.53168 -14.33583 -14.19435 -13.86392 -13.79864 -13.61508 -13.36962 -13.22681 -12.99184 -12.60063 -12.46634 -11.97027 -11.94886 -11.71653 -11.47469 -11.18518 -10.90903 -10.86356 -10.67307 -10.33913 -9.84657 -5.13064 -0.86358 -0.37510 1.01461 1.36473 1.40802 1.71361 1.79494 2.21866 2.72970 2.77446 2.81980 2.91819 2.99723 3.02910 3.07156 3.12046 3.31699 3.34694 3.45695 3.66893 3.74093 4.02616 4.08117 4.24048 4.24775 4.28019 4.30554 4.35964 4.40064 4.45380 4.50293 4.52996 4.60535 4.66972 4.67972 4.75029 4.89988 5.05264 5.14676 5.32664 6.14784 6.17558 6.58410 6.91689 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.519 6.519 2 C -0.080 4.080 3 Si 0.697 3.303 4 C -0.097 4.097 5 C 0.112 3.888 6 F -0.120 7.120 7 C -0.093 4.093 8 C -0.141 4.141 9 C 0.562 3.438 10 O -0.512 6.512 11 N -0.722 5.722 12 C 0.113 3.887 13 C 0.076 3.924 14 F -0.184 7.184 15 C -0.147 4.147 16 C -0.111 4.111 17 H 0.097 0.903 18 C 0.085 3.915 19 O -0.573 6.573 20 C -0.141 4.141 21 C 0.161 3.839 22 F -0.104 7.104 23 C -0.139 4.139 24 H 0.378 0.622 25 H 0.127 0.873 26 H -0.249 1.249 27 H -0.254 1.254 28 H 0.151 0.849 29 H 0.404 0.596 30 H 0.085 0.915 31 H 0.095 0.905 32 H 0.105 0.895 33 H 0.086 0.914 34 H 0.058 0.942 35 H 0.051 0.949 36 H 0.383 0.617 37 H 0.088 0.912 38 H 0.111 0.889 39 H 0.159 0.841 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.204 -2.031 -0.594 2.434 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.326 6.326 2 C -0.189 4.189 3 Si 0.597 3.403 4 C -0.098 4.098 5 C 0.092 3.908 6 F -0.098 7.098 7 C -0.113 4.113 8 C -0.145 4.145 9 C 0.348 3.652 10 O -0.388 6.388 11 N -0.375 5.375 12 C -0.011 4.011 13 C 0.058 3.942 14 F -0.164 7.164 15 C -0.184 4.184 16 C -0.129 4.129 17 H 0.115 0.885 18 C 0.007 3.993 19 O -0.379 6.379 20 C -0.179 4.179 21 C 0.140 3.860 22 F -0.082 7.082 23 C -0.158 4.158 24 H 0.226 0.774 25 H 0.145 0.855 26 H -0.173 1.173 27 H -0.179 1.179 28 H 0.169 0.831 29 H 0.241 0.759 30 H 0.103 0.897 31 H 0.113 0.887 32 H 0.124 0.876 33 H 0.105 0.895 34 H 0.076 0.924 35 H 0.069 0.931 36 H 0.231 0.769 37 H 0.107 0.893 38 H 0.130 0.870 39 H 0.176 0.824 Dipole moment (debyes) X Y Z Total from point charges 1.882 -0.667 -0.328 2.024 hybrid contribution -1.919 -0.990 0.051 2.160 sum -0.037 -1.658 -0.277 1.681 Atomic orbital electron populations 1.86691 1.16677 1.79948 1.49250 1.25118 0.84701 1.11788 0.97302 0.94737 0.91312 0.73383 0.80898 1.20434 0.99316 0.92602 0.97493 1.17209 0.98833 0.88837 0.85887 1.91586 1.84182 1.78018 1.56032 1.21198 0.97567 1.01143 0.91342 1.19825 1.05748 0.92531 0.96379 1.17799 0.79068 0.82063 0.86294 1.90900 1.44219 1.65694 1.37982 1.45686 1.64679 1.06360 1.20778 1.21888 1.01884 0.88675 0.88604 1.22257 0.81199 0.93558 0.97216 1.92842 1.43311 1.93207 1.87067 1.23690 0.97726 0.96576 1.00428 1.22254 1.00429 0.93855 0.96402 0.88452 1.22069 0.93379 0.89266 0.94597 1.86447 1.40034 1.39438 1.71977 1.23570 1.02536 0.96103 0.95676 1.17474 0.95305 0.87881 0.85370 1.91658 1.83549 1.77087 1.55924 1.21067 1.00996 1.01821 0.91891 0.77394 0.85478 1.17295 1.17883 0.83109 0.75949 0.89670 0.88735 0.87631 0.89532 0.92406 0.93118 0.76943 0.89307 0.87034 0.82389 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.52 -0.10 12.88 -35.23 -0.45 -0.55 16 2 C -0.08 0.11 2.44 36.01 0.09 0.20 16 3 Si 0.70 -1.68 30.23 -169.99 -5.14 -6.82 16 4 C -0.10 0.10 5.27 -104.49 -0.55 -0.45 16 5 C 0.11 -0.04 7.23 -39.49 -0.29 -0.33 16 6 F -0.12 -0.13 16.73 2.25 0.04 -0.09 16 7 C -0.09 0.12 9.52 -39.11 -0.37 -0.25 16 8 C -0.14 -0.07 5.88 -104.92 -0.62 -0.69 16 9 C 0.56 1.07 7.77 -12.40 -0.10 0.97 16 10 O -0.51 -2.86 15.34 5.31 0.08 -2.78 16 11 N -0.72 0.54 5.40 -61.30 -0.33 0.21 16 12 C 0.11 -0.16 5.43 -4.04 -0.02 -0.18 16 13 C 0.08 -0.16 1.73 -89.81 -0.16 -0.31 16 14 F -0.18 0.06 14.79 2.25 0.03 0.10 16 15 C -0.15 0.32 7.07 -25.92 -0.18 0.14 16 16 C -0.11 0.18 4.20 -89.81 -0.38 -0.20 16 17 H 0.10 -0.12 8.14 -51.93 -0.42 -0.54 16 18 C 0.08 -0.08 6.65 37.16 0.25 0.16 16 19 O -0.57 -0.11 13.66 -35.23 -0.48 -0.59 16 20 C -0.14 0.40 7.12 -25.92 -0.18 0.22 16 21 C 0.16 0.16 7.28 -38.97 -0.28 -0.12 16 22 F -0.10 -0.36 15.55 2.25 0.04 -0.32 16 23 C -0.14 0.16 8.62 -39.58 -0.34 -0.19 16 24 H 0.38 -1.13 8.70 45.56 0.40 -0.74 16 25 H 0.13 -0.24 7.89 -51.93 -0.41 -0.65 16 26 H -0.25 -0.22 7.11 56.52 0.40 0.18 16 27 H -0.25 0.24 6.68 56.52 0.38 0.62 16 28 H 0.15 -0.54 6.40 -52.49 -0.34 -0.88 16 29 H 0.40 -1.03 6.06 -40.82 -0.25 -1.27 16 30 H 0.09 -0.06 8.14 -51.93 -0.42 -0.49 16 31 H 0.09 -0.17 7.85 -51.93 -0.41 -0.58 16 32 H 0.11 -0.33 7.90 -51.93 -0.41 -0.74 16 33 H 0.09 -0.13 8.10 -51.93 -0.42 -0.55 16 34 H 0.06 -0.05 6.31 -51.93 -0.33 -0.38 16 35 H 0.05 -0.09 8.14 -51.92 -0.42 -0.51 16 36 H 0.38 -1.46 9.12 45.56 0.42 -1.04 16 37 H 0.09 -0.25 8.10 -51.93 -0.42 -0.67 16 38 H 0.11 -0.47 8.10 -51.93 -0.42 -0.89 16 39 H 0.16 -0.41 4.83 -52.48 -0.25 -0.67 16 LS Contribution 338.38 15.07 5.10 5.10 Total: 0.00 -8.98 338.38 -7.58 -16.56 By element: Atomic # 1 Polarization: -6.45 SS G_CDS: -3.33 Total: -9.78 kcal Atomic # 6 Polarization: 2.11 SS G_CDS: -3.13 Total: -1.02 kcal Atomic # 7 Polarization: 0.54 SS G_CDS: -0.33 Total: 0.21 kcal Atomic # 8 Polarization: -3.07 SS G_CDS: -0.85 Total: -3.92 kcal Atomic # 9 Polarization: -0.42 SS G_CDS: 0.11 Total: -0.32 kcal Atomic # 14 Polarization: -1.68 SS G_CDS: -5.14 Total: -6.82 kcal Total LS contribution 5.10 Total: 5.10 kcal Total: -8.98 -7.58 -16.56 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16500644_12360598.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -173.044 kcal (2) G-P(sol) polarization free energy of solvation -8.978 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -182.022 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.584 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.563 kcal (6) G-S(sol) free energy of system = (1) + (5) -189.607 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.73 seconds