Wall clock time and date at job start Sun Mar 7 2021 09:01:44 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42894 * 1 3 3 Si 1.86298 * 109.47725 * 2 1 4 4 C 1.50699 * 109.47188 * 120.00199 * 2 1 3 5 5 C 1.37818 * 119.94230 * 14.72415 * 4 2 1 6 6 C 1.39674 * 119.87934 * 179.75176 * 5 4 2 7 7 C 1.47723 * 120.11632 * 180.29413 * 6 5 4 8 8 O 1.21571 * 120.00099 * 0.24969 * 7 6 5 9 9 N 1.34774 * 120.00205 * 180.24694 * 7 6 5 10 10 C 1.46494 * 120.00370 * 179.97438 * 9 7 6 11 11 C 1.52997 * 109.47450 * 179.97438 * 10 9 7 12 12 F 1.39900 * 112.84732 * 48.80628 * 11 10 9 13 13 C 1.53777 * 113.61882 * 180.02562 * 11 10 9 14 14 C 1.53775 * 87.08382 * 139.98325 * 13 11 10 15 15 H 1.08998 * 113.61524 * 220.02055 * 14 13 11 16 16 C 1.53005 * 113.61539 * 89.20313 * 14 13 11 17 17 O 1.42894 * 109.46920 * 175.00107 * 16 14 13 18 18 C 1.53777 * 113.61652 * 277.50254 * 11 10 9 19 19 C 1.39625 * 119.76372 * 0.54289 * 6 5 4 20 20 C 1.37859 * 119.87912 * 359.72626 * 19 6 5 21 21 C 1.38630 * 120.12126 * 359.97438 * 20 19 6 22 22 F 1.35101 * 119.87938 * 180.02562 * 21 20 19 23 23 H 0.96709 * 113.99337 * 300.00145 * 1 2 3 24 24 H 1.09006 * 109.47099 * 239.99662 * 2 1 3 25 25 H 1.48506 * 109.99834 * 300.00610 * 3 2 1 26 26 H 1.48502 * 110.00011 * 61.31874 * 3 2 1 27 27 H 1.07999 * 120.05812 * 359.97438 * 5 4 2 28 28 H 0.97001 * 119.99539 * 0.02562 * 9 7 6 29 29 H 1.09000 * 109.47634 * 300.00756 * 10 9 7 30 30 H 1.09000 * 109.46847 * 60.00279 * 10 9 7 31 31 H 1.09000 * 113.61654 * 254.53778 * 13 11 10 32 32 H 1.09004 * 113.61244 * 25.43445 * 13 11 10 33 33 H 1.09002 * 109.46551 * 295.00080 * 16 14 13 34 34 H 1.08997 * 109.46853 * 55.00106 * 16 14 13 35 35 H 0.96702 * 113.99792 * 179.97438 * 17 16 14 36 36 H 1.09000 * 113.61753 * 334.56200 * 18 11 10 37 37 H 1.09008 * 113.61700 * 105.46603 * 18 11 10 38 38 H 1.08005 * 120.05803 * 179.70707 * 19 6 5 39 39 H 1.08009 * 119.93819 * 180.02562 * 20 19 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7104 1.2304 5 6 1.0716 -1.4901 1.9737 6 6 1.5399 -2.1522 3.1110 7 6 0.6246 -2.9944 3.9078 8 8 -0.5374 -3.1159 3.5716 9 7 1.0776 -3.6282 5.0076 10 6 0.1698 -4.4630 5.7982 11 6 0.9299 -5.0629 6.9828 12 9 1.6708 -4.1107 7.6911 13 6 0.0626 -5.9612 7.8802 14 6 1.2755 -6.9015 7.9771 15 1 1.0128 -7.9586 7.9359 16 6 2.2183 -6.5683 9.1351 17 8 3.2445 -7.5596 9.2141 18 6 1.7295 -6.3269 6.6253 19 6 2.8749 -2.0109 3.4948 20 6 3.7249 -1.2240 2.7472 21 6 3.2565 -0.5741 1.6159 22 9 4.0938 0.1953 0.8865 23 1 -0.3932 0.4418 0.7651 24 1 1.7923 -0.5139 -0.8900 25 1 1.5615 2.4679 -1.2085 26 1 1.5881 2.4585 1.2242 27 1 0.0387 -1.5919 1.6753 28 1 2.0047 -3.5310 5.2760 29 1 -0.6558 -3.8541 6.1665 30 1 -0.2215 -5.2662 5.1738 31 1 -0.2085 -5.4988 8.8293 32 1 -0.7906 -6.4009 7.3636 33 1 2.6697 -5.5906 8.9662 34 1 1.6558 -6.5525 10.0686 35 1 3.8803 -7.4115 9.9275 36 1 1.3319 -6.8666 5.7658 37 1 2.8048 -6.1598 6.5611 38 1 3.2408 -2.5169 4.3761 39 1 4.7578 -1.1144 3.0431 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16500644_12496548.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:01:44 Heat of formation + Delta-G solvation = -151.513777 kcal Electronic energy + Delta-G solvation = -25956.670160 eV Core-core repulsion = 21695.855074 eV Total energy + Delta-G solvation = -4260.815085 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 314.116 amu Computer time = 0.69 seconds Orbital eigenvalues (eV) -50.38752 -49.03679 -41.43347 -40.15884 -39.60118 -37.80911 -37.28592 -35.75503 -32.98715 -32.16384 -30.24170 -27.48735 -27.23353 -26.86300 -24.74577 -23.35007 -22.95939 -21.57884 -20.30695 -19.57558 -18.75883 -18.58514 -18.17230 -17.84994 -17.29885 -17.12115 -17.00084 -16.91280 -16.32123 -16.06739 -15.94828 -15.80636 -15.50650 -15.39594 -15.24570 -14.82394 -14.42394 -14.38175 -14.21048 -13.88974 -13.85968 -13.63929 -13.39693 -13.32519 -12.82860 -12.61023 -12.43207 -11.95193 -11.91251 -11.71581 -11.46802 -11.20435 -11.00936 -10.89631 -10.35370 -10.12485 -9.81898 -4.78748 -0.57466 -0.08498 1.18645 1.56941 1.61707 1.82721 1.96246 2.52401 2.81384 2.85299 2.93026 3.00900 3.08606 3.13208 3.26104 3.31457 3.48986 3.57272 3.72561 3.82281 4.01729 4.06865 4.23891 4.30296 4.35510 4.36201 4.39529 4.44852 4.50821 4.53055 4.67544 4.68349 4.73892 4.76186 4.91008 4.94201 4.98110 5.07287 5.17436 5.49501 6.24457 6.28146 6.57397 7.01209 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.527 6.527 2 C -0.074 4.074 3 Si 0.676 3.324 4 C -0.154 4.154 5 C -0.023 4.023 6 C -0.141 4.141 7 C 0.563 3.437 8 O -0.528 6.528 9 N -0.724 5.724 10 C 0.113 3.887 11 C 0.077 3.923 12 F -0.184 7.184 13 C -0.141 4.141 14 C -0.111 4.111 15 H 0.097 0.903 16 C 0.085 3.915 17 O -0.573 6.573 18 C -0.146 4.146 19 C -0.060 4.060 20 C -0.149 4.149 21 C 0.124 3.876 22 F -0.104 7.104 23 H 0.378 0.622 24 H 0.128 0.872 25 H -0.248 1.248 26 H -0.256 1.256 27 H 0.154 0.846 28 H 0.404 0.596 29 H 0.083 0.917 30 H 0.093 0.907 31 H 0.088 0.912 32 H 0.111 0.889 33 H 0.058 0.942 34 H 0.051 0.949 35 H 0.383 0.617 36 H 0.105 0.895 37 H 0.086 0.914 38 H 0.138 0.862 39 H 0.150 0.850 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.040 -1.136 3.712 5.603 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.333 6.333 2 C -0.183 4.183 3 Si 0.575 3.425 4 C -0.156 4.156 5 C -0.042 4.042 6 C -0.145 4.145 7 C 0.350 3.650 8 O -0.405 6.405 9 N -0.377 5.377 10 C -0.011 4.011 11 C 0.058 3.942 12 F -0.164 7.164 13 C -0.179 4.179 14 C -0.129 4.129 15 H 0.115 0.885 16 C 0.007 3.993 17 O -0.379 6.379 18 C -0.184 4.184 19 C -0.079 4.079 20 C -0.167 4.167 21 C 0.104 3.896 22 F -0.082 7.082 23 H 0.226 0.774 24 H 0.146 0.854 25 H -0.173 1.173 26 H -0.180 1.180 27 H 0.172 0.828 28 H 0.240 0.760 29 H 0.102 0.898 30 H 0.111 0.889 31 H 0.107 0.893 32 H 0.129 0.871 33 H 0.076 0.924 34 H 0.069 0.931 35 H 0.231 0.769 36 H 0.123 0.877 37 H 0.104 0.896 38 H 0.156 0.844 39 H 0.168 0.832 Dipole moment (debyes) X Y Z Total from point charges 2.775 -0.892 2.413 3.784 hybrid contribution -0.055 0.227 1.213 1.235 sum 2.721 -0.664 3.626 4.582 Atomic orbital electron populations 1.86612 1.17035 1.80108 1.49523 1.24945 0.84572 1.11196 0.97550 0.94754 0.92736 0.73530 0.81447 1.20389 0.92909 1.02136 1.00144 1.20971 1.00956 0.91154 0.91127 1.19926 0.94239 1.02119 0.98170 1.18109 0.87362 0.79333 0.80197 1.90831 1.17624 1.62633 1.69450 1.45713 1.14616 1.49947 1.27400 1.21843 0.92769 0.95599 0.90887 1.22239 0.93348 0.86834 0.91799 1.92847 1.78039 1.65852 1.79698 1.23564 0.97501 0.96036 1.00787 1.22249 0.95036 1.01223 0.94441 0.88491 1.22063 0.89074 0.91271 0.96872 1.86448 1.42279 1.51386 1.57787 1.23664 1.01732 0.94342 0.98665 1.21190 0.91882 0.96147 0.98637 1.21093 1.01883 0.99028 0.94718 1.17649 0.87253 0.93205 0.91489 1.91198 1.69763 1.71299 1.75971 0.77383 0.85440 1.17308 1.17998 0.82832 0.76027 0.89832 0.88906 0.89308 0.87080 0.92406 0.93110 0.76949 0.87678 0.89565 0.84425 0.83216 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.74 11.64 -35.23 -0.41 -1.15 16 2 C -0.07 -0.02 2.96 36.01 0.11 0.09 16 3 Si 0.68 0.11 29.57 -169.99 -5.03 -4.92 16 4 C -0.15 -0.03 5.13 -104.61 -0.54 -0.56 16 5 C -0.02 -0.02 8.78 -39.20 -0.34 -0.37 16 6 C -0.14 -0.05 5.87 -104.97 -0.62 -0.66 16 7 C 0.56 0.96 7.77 -12.39 -0.10 0.87 16 8 O -0.53 -2.83 16.34 5.30 0.09 -2.74 16 9 N -0.72 0.64 5.42 -61.29 -0.33 0.31 16 10 C 0.11 -0.15 5.37 -4.05 -0.02 -0.17 16 11 C 0.08 -0.16 1.66 -89.81 -0.15 -0.31 16 12 F -0.18 0.08 15.02 2.25 0.03 0.11 16 13 C -0.14 0.40 7.13 -25.92 -0.18 0.21 16 14 C -0.11 0.19 4.19 -89.83 -0.38 -0.19 16 15 H 0.10 -0.12 8.14 -51.93 -0.42 -0.54 16 16 C 0.08 -0.10 6.66 37.16 0.25 0.15 16 17 O -0.57 -0.02 13.66 -35.23 -0.48 -0.50 16 18 C -0.15 0.33 7.07 -25.94 -0.18 0.15 16 19 C -0.06 0.12 9.54 -39.20 -0.37 -0.25 16 20 C -0.15 0.32 10.01 -39.58 -0.40 -0.08 16 21 C 0.12 -0.09 6.67 -39.27 -0.26 -0.36 16 22 F -0.10 0.13 13.71 2.25 0.03 0.16 16 23 H 0.38 -0.52 8.42 45.56 0.38 -0.14 16 24 H 0.13 -0.07 7.96 -51.93 -0.41 -0.48 16 25 H -0.25 -0.73 7.11 56.52 0.40 -0.33 16 26 H -0.26 -0.59 7.11 56.52 0.40 -0.19 16 27 H 0.15 0.26 6.65 -52.49 -0.35 -0.09 16 28 H 0.40 -1.15 6.21 -40.82 -0.25 -1.40 16 29 H 0.08 -0.05 8.14 -51.93 -0.42 -0.47 16 30 H 0.09 -0.15 7.94 -51.93 -0.41 -0.56 16 31 H 0.09 -0.25 8.10 -51.93 -0.42 -0.67 16 32 H 0.11 -0.46 8.10 -51.93 -0.42 -0.88 16 33 H 0.06 -0.07 6.32 -51.93 -0.33 -0.39 16 34 H 0.05 -0.09 8.14 -51.93 -0.42 -0.52 16 35 H 0.38 -1.53 9.12 45.56 0.42 -1.12 16 36 H 0.10 -0.32 7.96 -51.93 -0.41 -0.74 16 37 H 0.09 -0.14 8.10 -51.92 -0.42 -0.57 16 38 H 0.14 -0.65 6.40 -52.48 -0.34 -0.99 16 39 H 0.15 -0.65 8.06 -52.48 -0.42 -1.08 16 LS Contribution 332.14 15.07 5.01 5.01 Total: 0.00 -8.22 332.14 -8.14 -16.36 By element: Atomic # 1 Polarization: -7.29 SS G_CDS: -3.86 Total: -11.15 kcal Atomic # 6 Polarization: 1.70 SS G_CDS: -3.19 Total: -1.48 kcal Atomic # 7 Polarization: 0.64 SS G_CDS: -0.33 Total: 0.31 kcal Atomic # 8 Polarization: -3.59 SS G_CDS: -0.80 Total: -4.40 kcal Atomic # 9 Polarization: 0.21 SS G_CDS: 0.06 Total: 0.27 kcal Atomic # 14 Polarization: 0.11 SS G_CDS: -5.03 Total: -4.92 kcal Total LS contribution 5.01 Total: 5.01 kcal Total: -8.22 -8.14 -16.36 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16500644_12496548.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -135.156 kcal (2) G-P(sol) polarization free energy of solvation -8.220 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -143.376 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.137 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.358 kcal (6) G-S(sol) free energy of system = (1) + (5) -151.514 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.69 seconds