Wall clock time and date at job start Sun Mar 7 2021 09:01:43 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42894 * 1 3 3 Si 1.86298 * 109.47725 * 2 1 4 4 C 1.50699 * 109.47188 * 120.00199 * 2 1 3 5 5 C 1.37818 * 119.94230 * 14.72415 * 4 2 1 6 6 C 1.39674 * 119.87934 * 179.75176 * 5 4 2 7 7 C 1.47723 * 120.11632 * 180.29413 * 6 5 4 8 8 O 1.21571 * 120.00099 * 0.24969 * 7 6 5 9 9 N 1.34774 * 120.00205 * 180.24694 * 7 6 5 10 10 C 1.46494 * 120.00370 * 179.97438 * 9 7 6 11 11 C 1.52997 * 109.47450 * 179.97438 * 10 9 7 12 12 F 1.39900 * 112.84732 * 48.80628 * 11 10 9 13 13 C 1.53777 * 113.61882 * 180.02562 * 11 10 9 14 14 C 1.53775 * 87.08382 * 139.98325 * 13 11 10 15 15 H 1.08998 * 113.61524 * 220.02055 * 14 13 11 16 16 C 1.53005 * 113.61539 * 89.20313 * 14 13 11 17 17 O 1.42894 * 109.46920 * 175.00107 * 16 14 13 18 18 C 1.53777 * 113.61652 * 277.50254 * 11 10 9 19 19 C 1.39625 * 119.76372 * 0.54289 * 6 5 4 20 20 C 1.37859 * 119.87912 * 359.72626 * 19 6 5 21 21 C 1.38630 * 120.12126 * 359.97438 * 20 19 6 22 22 F 1.35101 * 119.87938 * 180.02562 * 21 20 19 23 23 H 0.96709 * 113.99337 * 300.00145 * 1 2 3 24 24 H 1.09006 * 109.47099 * 239.99662 * 2 1 3 25 25 H 1.48506 * 109.99834 * 300.00610 * 3 2 1 26 26 H 1.48502 * 110.00011 * 61.31874 * 3 2 1 27 27 H 1.07999 * 120.05812 * 359.97438 * 5 4 2 28 28 H 0.97001 * 119.99539 * 0.02562 * 9 7 6 29 29 H 1.09000 * 109.47634 * 300.00756 * 10 9 7 30 30 H 1.09000 * 109.46847 * 60.00279 * 10 9 7 31 31 H 1.09000 * 113.61654 * 254.53778 * 13 11 10 32 32 H 1.09004 * 113.61244 * 25.43445 * 13 11 10 33 33 H 1.09002 * 109.46551 * 295.00080 * 16 14 13 34 34 H 1.08997 * 109.46853 * 55.00106 * 16 14 13 35 35 H 0.96702 * 113.99792 * 179.97438 * 17 16 14 36 36 H 1.09000 * 113.61753 * 334.56200 * 18 11 10 37 37 H 1.09008 * 113.61700 * 105.46603 * 18 11 10 38 38 H 1.08005 * 120.05803 * 179.70707 * 19 6 5 39 39 H 1.08009 * 119.93819 * 180.02562 * 20 19 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7104 1.2304 5 6 1.0716 -1.4901 1.9737 6 6 1.5399 -2.1522 3.1110 7 6 0.6246 -2.9944 3.9078 8 8 -0.5374 -3.1159 3.5716 9 7 1.0776 -3.6282 5.0076 10 6 0.1698 -4.4630 5.7982 11 6 0.9299 -5.0629 6.9828 12 9 1.6708 -4.1107 7.6911 13 6 0.0626 -5.9612 7.8802 14 6 1.2755 -6.9015 7.9771 15 1 1.0128 -7.9586 7.9359 16 6 2.2183 -6.5683 9.1351 17 8 3.2445 -7.5596 9.2141 18 6 1.7295 -6.3269 6.6253 19 6 2.8749 -2.0109 3.4948 20 6 3.7249 -1.2240 2.7472 21 6 3.2565 -0.5741 1.6159 22 9 4.0938 0.1953 0.8865 23 1 -0.3932 0.4418 0.7651 24 1 1.7923 -0.5139 -0.8900 25 1 1.5615 2.4679 -1.2085 26 1 1.5881 2.4585 1.2242 27 1 0.0387 -1.5919 1.6753 28 1 2.0047 -3.5310 5.2760 29 1 -0.6558 -3.8541 6.1665 30 1 -0.2215 -5.2662 5.1738 31 1 -0.2085 -5.4988 8.8293 32 1 -0.7906 -6.4009 7.3636 33 1 2.6697 -5.5906 8.9662 34 1 1.6558 -6.5525 10.0686 35 1 3.8803 -7.4115 9.9275 36 1 1.3319 -6.8666 5.7658 37 1 2.8048 -6.1598 6.5611 38 1 3.2408 -2.5169 4.3761 39 1 4.7578 -1.1144 3.0431 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16500644_12496548.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:01:43 Heat of formation + Delta-G solvation = -152.989369 kcal Electronic energy + Delta-G solvation = -25956.734146 eV Core-core repulsion = 21695.855074 eV Total energy + Delta-G solvation = -4260.879072 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 314.116 amu Computer time = 0.79 seconds Orbital eigenvalues (eV) -50.29300 -48.94138 -41.45751 -40.04870 -39.59355 -37.84265 -37.21314 -35.79446 -32.94849 -32.10511 -30.16186 -27.43211 -27.05413 -26.78374 -24.70345 -23.28732 -22.84366 -21.60524 -20.16554 -19.53300 -18.67328 -18.53681 -18.13396 -17.85623 -17.19591 -17.05216 -16.92130 -16.87501 -16.32688 -16.08219 -15.91468 -15.76945 -15.40508 -15.29530 -15.16505 -14.78140 -14.35698 -14.33224 -14.24843 -13.94455 -13.75801 -13.48999 -13.34641 -13.17773 -12.86424 -12.48900 -12.46165 -11.98734 -11.80434 -11.63714 -11.31196 -11.26833 -11.03914 -10.79164 -10.39071 -10.06317 -9.76939 -4.85071 -0.53378 -0.00630 1.15534 1.49538 1.56204 1.82776 1.89778 2.54606 2.93160 2.99976 3.10021 3.12129 3.19140 3.24929 3.30501 3.48453 3.57569 3.65195 3.89429 3.96367 4.08906 4.21250 4.37266 4.40125 4.42372 4.50416 4.56474 4.60918 4.66361 4.70178 4.77897 4.86821 4.87015 4.92607 4.98290 5.05032 5.05503 5.17566 5.29584 5.59176 6.28074 6.31958 6.84070 6.97570 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.545 6.545 2 C -0.079 4.079 3 Si 0.745 3.255 4 C -0.162 4.162 5 C -0.037 4.037 6 C -0.154 4.154 7 C 0.561 3.439 8 O -0.574 6.574 9 N -0.711 5.711 10 C 0.112 3.888 11 C 0.081 3.919 12 F -0.193 7.193 13 C -0.135 4.135 14 C -0.118 4.118 15 H 0.092 0.908 16 C 0.083 3.917 17 O -0.594 6.594 18 C -0.142 4.142 19 C -0.048 4.048 20 C -0.141 4.141 21 C 0.121 3.879 22 F -0.099 7.099 23 H 0.387 0.613 24 H 0.135 0.865 25 H -0.289 1.289 26 H -0.285 1.285 27 H 0.137 0.863 28 H 0.415 0.585 29 H 0.075 0.925 30 H 0.097 0.903 31 H 0.090 0.910 32 H 0.125 0.875 33 H 0.057 0.943 34 H 0.056 0.944 35 H 0.397 0.603 36 H 0.114 0.886 37 H 0.082 0.918 38 H 0.168 0.832 39 H 0.180 0.820 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.552 -1.583 4.515 7.329 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.352 6.352 2 C -0.187 4.187 3 Si 0.648 3.352 4 C -0.164 4.164 5 C -0.056 4.056 6 C -0.158 4.158 7 C 0.349 3.651 8 O -0.455 6.455 9 N -0.364 5.364 10 C -0.012 4.012 11 C 0.062 3.938 12 F -0.173 7.173 13 C -0.173 4.173 14 C -0.136 4.136 15 H 0.110 0.890 16 C 0.005 3.995 17 O -0.402 6.402 18 C -0.180 4.180 19 C -0.067 4.067 20 C -0.160 4.160 21 C 0.101 3.899 22 F -0.078 7.078 23 H 0.237 0.763 24 H 0.152 0.848 25 H -0.217 1.217 26 H -0.211 1.211 27 H 0.155 0.845 28 H 0.253 0.747 29 H 0.093 0.907 30 H 0.115 0.885 31 H 0.108 0.892 32 H 0.143 0.857 33 H 0.075 0.925 34 H 0.074 0.926 35 H 0.247 0.753 36 H 0.132 0.868 37 H 0.101 0.899 38 H 0.185 0.815 39 H 0.197 0.803 Dipole moment (debyes) X Y Z Total from point charges 4.334 -1.356 3.255 5.587 hybrid contribution -0.516 0.381 0.995 1.184 sum 3.818 -0.975 4.250 5.796 Atomic orbital electron populations 1.86574 1.17904 1.80444 1.50320 1.25067 0.83996 1.11461 0.98209 0.94103 0.91585 0.71937 0.77536 1.20325 0.93500 1.02476 1.00059 1.20879 1.00502 0.92226 0.92018 1.19920 0.95220 1.02481 0.98130 1.18364 0.86941 0.79247 0.80538 1.90804 1.19526 1.64401 1.70753 1.45647 1.15203 1.49029 1.26476 1.21890 0.92668 0.95508 0.91137 1.22222 0.93445 0.86554 0.91529 1.92830 1.78291 1.66285 1.79901 1.23596 0.97508 0.95368 1.00839 1.22292 0.95550 1.01134 0.94636 0.88990 1.22125 0.89024 0.90965 0.97371 1.86407 1.42997 1.52002 1.58829 1.23666 1.01478 0.94052 0.98762 1.21490 0.90555 0.95465 0.99178 1.21443 1.03172 0.97741 0.93612 1.17784 0.86846 0.93295 0.91973 1.91202 1.69443 1.71154 1.75979 0.76338 0.84780 1.21681 1.21120 0.84528 0.74737 0.90670 0.88512 0.89155 0.85681 0.92511 0.92598 0.75267 0.86761 0.89937 0.81478 0.80259 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -2.42 11.64 -148.98 -1.73 -4.15 16 2 C -0.08 -0.10 2.96 71.24 0.21 0.11 16 3 Si 0.74 0.86 29.57 68.60 2.03 2.89 16 4 C -0.16 -0.13 5.13 -19.86 -0.10 -0.23 16 5 C -0.04 -0.12 8.78 22.52 0.20 0.08 16 6 C -0.15 -0.13 5.87 -20.09 -0.12 -0.25 16 7 C 0.56 2.31 7.77 86.75 0.67 2.98 16 8 O -0.57 -7.21 16.34 -3.94 -0.06 -7.27 16 9 N -0.71 1.43 5.42 -466.11 -2.52 -1.09 16 10 C 0.11 -0.30 5.37 86.38 0.46 0.17 16 11 C 0.08 -0.38 1.66 -10.27 -0.02 -0.40 16 12 F -0.19 0.29 15.02 44.97 0.68 0.97 16 13 C -0.14 0.84 7.13 31.12 0.22 1.06 16 14 C -0.12 0.44 4.19 -10.28 -0.04 0.40 16 15 H 0.09 -0.24 8.14 -2.39 -0.02 -0.26 16 16 C 0.08 -0.21 6.66 71.98 0.48 0.27 16 17 O -0.59 0.08 13.66 -148.98 -2.03 -1.96 16 18 C -0.14 0.73 7.07 31.11 0.22 0.95 16 19 C -0.05 0.28 9.54 22.51 0.21 0.49 16 20 C -0.14 0.90 10.01 22.27 0.22 1.12 16 21 C 0.12 -0.30 6.67 22.47 0.15 -0.15 16 22 F -0.10 0.36 13.71 44.97 0.62 0.98 16 23 H 0.39 -0.29 8.42 -74.05 -0.62 -0.91 16 24 H 0.13 -0.07 7.96 -2.38 -0.02 -0.09 16 25 H -0.29 -2.24 7.11 99.48 0.71 -1.53 16 26 H -0.28 -1.66 7.11 99.48 0.71 -0.95 16 27 H 0.14 0.83 6.65 -2.91 -0.02 0.81 16 28 H 0.41 -2.85 6.21 -92.71 -0.58 -3.42 16 29 H 0.07 -0.04 8.14 -2.39 -0.02 -0.06 16 30 H 0.10 -0.30 7.94 -2.39 -0.02 -0.32 16 31 H 0.09 -0.56 8.10 -2.39 -0.02 -0.58 16 32 H 0.12 -1.14 8.10 -2.38 -0.02 -1.16 16 33 H 0.06 -0.15 6.32 -2.39 -0.02 -0.16 16 34 H 0.06 -0.22 8.14 -2.39 -0.02 -0.24 16 35 H 0.40 -3.25 9.12 -74.06 -0.68 -3.92 16 36 H 0.11 -0.80 7.96 -2.39 -0.02 -0.82 16 37 H 0.08 -0.34 8.10 -2.38 -0.02 -0.36 16 38 H 0.17 -2.05 6.40 -2.91 -0.02 -2.07 16 39 H 0.18 -2.20 8.06 -2.91 -0.02 -2.22 16 Total: 0.00 -20.31 332.14 -0.97 -21.28 By element: Atomic # 1 Polarization: -17.55 SS G_CDS: -0.71 Total: -18.26 kcal Atomic # 6 Polarization: 3.84 SS G_CDS: 2.77 Total: 6.62 kcal Atomic # 7 Polarization: 1.43 SS G_CDS: -2.52 Total: -1.09 kcal Atomic # 8 Polarization: -9.55 SS G_CDS: -3.83 Total: -13.38 kcal Atomic # 9 Polarization: 0.65 SS G_CDS: 1.29 Total: 1.94 kcal Atomic # 14 Polarization: 0.86 SS G_CDS: 2.03 Total: 2.89 kcal Total: -20.31 -0.97 -21.28 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16500644_12496548.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -131.707 kcal (2) G-P(sol) polarization free energy of solvation -20.309 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -152.016 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.973 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.282 kcal (6) G-S(sol) free energy of system = (1) + (5) -152.989 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.79 seconds