Wall clock time and date at job start Sun Mar 7 2021 09:01:49 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42896 * 1 3 3 C 1.35892 * 117.00065 * 2 1 4 4 C 1.38813 * 119.93522 * 179.97438 * 3 2 1 5 5 C 1.37926 * 120.06475 * 179.97438 * 4 3 2 6 6 C 1.39355 * 119.93166 * 0.02562 * 5 4 3 7 7 C 1.48414 * 120.06241 * 179.97438 * 6 5 4 8 8 N 1.31619 * 126.03878 * 324.96508 * 7 6 5 9 9 N 1.40073 * 108.10962 * 180.02562 * 8 7 6 10 10 C 1.46501 * 125.93229 * 179.97438 * 9 8 7 11 11 C 1.50697 * 109.46953 * 304.98010 * 10 9 8 12 12 O 1.21274 * 120.00435 * 359.97438 * 11 10 9 13 13 N 1.34778 * 119.99380 * 180.02562 * 11 10 9 14 14 C 1.46504 * 119.99671 * 179.97438 * 13 11 10 15 15 C 1.52994 * 109.47263 * 179.97438 * 14 13 11 16 16 F 1.39902 * 112.84889 * 316.19743 * 15 14 13 17 17 C 1.53780 * 113.61653 * 87.50217 * 15 14 13 18 18 C 1.53780 * 87.08353 * 89.11837 * 17 15 14 19 19 H 1.09003 * 113.61143 * 270.89035 * 18 17 15 20 20 C 1.52994 * 113.69398 * 139.99211 * 18 17 15 21 21 O 1.42899 * 109.47034 * 87.46486 * 20 18 17 22 22 C 1.53784 * 113.61702 * 185.00151 * 15 14 13 23 23 C 1.35044 * 108.13873 * 359.73719 * 9 8 7 24 24 C 1.35087 * 107.97453 * 0.42397 * 23 9 8 25 25 C 1.50707 * 126.07141 * 179.84280 * 24 23 9 26 26 O 1.42903 * 109.46442 * 254.68962 * 25 24 23 27 27 Si 1.86293 * 109.47256 * 14.68528 * 25 24 23 28 28 C 1.39350 * 119.87466 * 0.27140 * 6 5 4 29 29 C 1.37920 * 119.93366 * 359.42764 * 28 6 5 30 30 H 1.09003 * 109.47057 * 299.99944 * 1 2 3 31 31 H 1.08993 * 109.47481 * 59.99884 * 1 2 3 32 32 H 1.09003 * 109.47368 * 180.02562 * 1 2 3 33 33 H 1.08005 * 119.97276 * 359.97438 * 4 3 2 34 34 H 1.07993 * 120.03592 * 180.02562 * 5 4 3 35 35 H 1.09004 * 109.46673 * 64.98010 * 10 9 8 36 36 H 1.08998 * 109.46748 * 184.97655 * 10 9 8 37 37 H 0.96998 * 120.00516 * 359.97438 * 13 11 10 38 38 H 1.08998 * 109.47209 * 299.99993 * 14 13 11 39 39 H 1.09008 * 109.47102 * 59.99583 * 14 13 11 40 40 H 1.08998 * 113.61755 * 203.66921 * 17 15 14 41 41 H 1.09006 * 113.61312 * 334.56679 * 17 15 14 42 42 H 1.08999 * 109.47360 * 207.46701 * 20 18 17 43 43 H 1.09004 * 109.47042 * 327.46913 * 20 18 17 44 44 H 0.96702 * 114.00260 * 180.02562 * 21 20 18 45 45 H 1.09003 * 113.61261 * 25.42891 * 22 15 14 46 46 H 1.09000 * 113.61740 * 156.24983 * 22 15 14 47 47 H 1.08003 * 126.01012 * 180.28711 * 23 9 8 48 48 H 1.08999 * 109.47345 * 134.69032 * 25 24 23 49 49 H 0.96700 * 114.00311 * 60.00230 * 26 25 24 50 50 H 1.48506 * 109.99973 * 180.02562 * 27 25 24 51 51 H 1.48493 * 110.00375 * 301.32185 * 27 25 24 52 52 H 1.08004 * 120.03508 * 179.72011 * 28 6 5 53 53 H 1.08008 * 119.97024 * 180.30060 * 29 28 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0459 1.2108 0.0000 4 6 3.4322 1.2819 0.0005 5 6 4.0612 2.5094 0.0000 6 6 3.3035 3.6789 -0.0005 7 6 3.9772 5.0013 -0.0005 8 7 5.1050 5.2958 0.6108 9 7 5.3952 6.6436 0.3636 10 6 6.5621 7.3769 0.8605 11 6 6.6277 7.2590 2.3615 12 8 5.7827 6.6253 2.9575 13 7 7.6249 7.8587 3.0415 14 6 7.6884 7.7446 4.5007 15 6 8.9070 8.5103 5.0196 16 9 10.0559 8.2867 4.2532 17 6 8.6285 9.9972 5.2961 18 6 8.2214 9.5756 6.7179 19 1 7.1657 9.3213 6.8124 20 6 8.7002 10.5391 7.8056 21 8 7.7324 11.5753 7.9837 22 6 9.1354 8.3528 6.5322 23 6 4.4154 7.1484 -0.4166 24 6 3.5225 6.1630 -0.6543 25 6 2.2663 6.2836 -1.4781 26 8 1.1307 6.3250 -0.6116 27 14 2.3338 7.8474 -2.4883 28 6 1.9120 3.6045 0.0052 29 6 1.2886 2.3742 -0.0006 30 1 -0.3633 0.5138 0.8900 31 1 -0.3634 0.5138 -0.8899 32 1 -0.3634 -1.0277 0.0005 33 1 4.0190 0.3751 0.0014 34 1 5.1397 2.5641 0.0000 35 1 7.4681 6.9574 0.4231 36 1 6.4768 8.4272 0.5819 37 1 8.3005 8.3659 2.5649 38 1 6.7822 8.1640 4.9377 39 1 7.7738 6.6943 4.7796 40 1 9.5211 10.6219 5.2646 41 1 7.8052 10.4038 4.7086 42 1 8.8274 9.9958 8.7419 43 1 9.6524 10.9785 7.5083 44 1 7.9709 12.2243 8.6597 45 1 8.7213 7.4318 6.9427 46 1 10.1669 8.5265 6.8386 47 1 4.3551 8.1623 -0.7840 48 1 2.1843 5.4243 -2.1437 49 1 1.1368 7.0660 0.0097 50 1 1.1003 7.9783 -3.3048 51 1 2.4776 9.0240 -1.5940 52 1 1.3222 4.5092 0.0094 53 1 0.2101 2.3158 -0.0010 There are 75 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 75 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16500644_12622750.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:01:49 Heat of formation + Delta-G solvation = -62.065917 kcal Electronic energy + Delta-G solvation = -38055.389625 eV Core-core repulsion = 32811.544355 eV Total energy + Delta-G solvation = -5243.845271 eV No. of doubly occupied orbitals = 75 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 406.178 amu Computer time = 1.72 seconds Orbital eigenvalues (eV) -48.78994 -42.49082 -41.07287 -40.81032 -39.98282 -38.48081 -37.81753 -37.27245 -35.66298 -34.61363 -32.24464 -32.06417 -31.29931 -30.26027 -28.87331 -28.04747 -27.14103 -26.86049 -25.68390 -23.81774 -23.67022 -22.87868 -21.92107 -21.49850 -21.01885 -20.31103 -19.16949 -18.86727 -18.44793 -18.26545 -17.81085 -17.31798 -17.18227 -17.02797 -16.75522 -16.69233 -16.55167 -16.49467 -16.22965 -15.92177 -15.72491 -15.47759 -15.26920 -15.22875 -14.93479 -14.90460 -14.60222 -14.54679 -14.48463 -14.11929 -13.91426 -13.79059 -13.67161 -13.48420 -13.23261 -13.02174 -12.83955 -12.80329 -12.49138 -12.39325 -12.20444 -12.17060 -12.13864 -11.65470 -11.60282 -11.54083 -11.39691 -11.27550 -10.86581 -10.50500 -10.39282 -10.34904 -10.03791 -9.65289 -8.94868 -4.81909 0.06076 0.34448 0.81740 1.28717 1.39606 1.43943 1.67030 1.70211 1.95392 2.06434 2.31453 2.79190 2.96327 3.06571 3.19812 3.20790 3.36923 3.43810 3.45977 3.57184 3.70654 3.87715 3.88386 3.90631 3.93875 4.12834 4.19631 4.22341 4.25358 4.31373 4.33376 4.35507 4.37091 4.44200 4.48107 4.55200 4.55419 4.59219 4.63769 4.64478 4.69204 4.70892 4.77325 4.87913 4.90645 4.96415 5.06582 5.08803 5.16794 5.29112 5.32993 5.53126 5.57866 5.71289 5.91182 6.30744 6.37166 6.58825 6.64013 6.85136 7.02414 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.017 3.983 2 O -0.334 6.334 3 C 0.124 3.876 4 C -0.167 4.167 5 C -0.060 4.060 6 C -0.071 4.071 7 C 0.119 3.881 8 N -0.296 5.296 9 N -0.360 5.360 10 C 0.112 3.888 11 C 0.498 3.502 12 O -0.563 6.563 13 N -0.714 5.714 14 C 0.123 3.877 15 C 0.083 3.917 16 F -0.203 7.203 17 C -0.138 4.138 18 C -0.111 4.111 19 H 0.095 0.905 20 C 0.084 3.916 21 O -0.597 6.597 22 C -0.138 4.138 23 C 0.075 3.925 24 C -0.262 4.262 25 C -0.051 4.051 26 O -0.546 6.546 27 Si 0.783 3.217 28 C -0.065 4.065 29 C -0.213 4.213 30 H 0.062 0.938 31 H 0.066 0.934 32 H 0.119 0.881 33 H 0.141 0.859 34 H 0.131 0.869 35 H 0.144 0.856 36 H 0.180 0.820 37 H 0.420 0.580 38 H 0.086 0.914 39 H 0.069 0.931 40 H 0.105 0.895 41 H 0.084 0.916 42 H 0.058 0.942 43 H 0.061 0.939 44 H 0.398 0.602 45 H 0.091 0.909 46 H 0.112 0.888 47 H 0.218 0.782 48 H 0.107 0.893 49 H 0.384 0.616 50 H -0.306 1.306 51 H -0.263 1.263 52 H 0.159 0.841 53 H 0.148 0.852 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.795 7.897 -1.069 9.300 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.077 4.077 2 O -0.248 6.248 3 C 0.078 3.922 4 C -0.185 4.185 5 C -0.079 4.079 6 C -0.073 4.073 7 C -0.046 4.046 8 N -0.118 5.118 9 N -0.142 5.142 10 C -0.012 4.012 11 C 0.283 3.717 12 O -0.440 6.440 13 N -0.368 5.368 14 C -0.001 4.001 15 C 0.064 3.936 16 F -0.184 7.184 17 C -0.176 4.176 18 C -0.130 4.130 19 H 0.113 0.887 20 C 0.007 3.993 21 O -0.406 6.406 22 C -0.176 4.176 23 C -0.070 4.070 24 C -0.274 4.274 25 C -0.159 4.159 26 O -0.355 6.355 27 Si 0.686 3.314 28 C -0.084 4.084 29 C -0.232 4.232 30 H 0.081 0.919 31 H 0.085 0.915 32 H 0.137 0.863 33 H 0.159 0.841 34 H 0.149 0.851 35 H 0.162 0.838 36 H 0.197 0.803 37 H 0.258 0.742 38 H 0.105 0.895 39 H 0.087 0.913 40 H 0.124 0.876 41 H 0.103 0.897 42 H 0.076 0.924 43 H 0.079 0.921 44 H 0.248 0.752 45 H 0.109 0.891 46 H 0.131 0.869 47 H 0.235 0.765 48 H 0.125 0.875 49 H 0.234 0.766 50 H -0.234 1.234 51 H -0.189 1.189 52 H 0.176 0.824 53 H 0.165 0.835 Dipole moment (debyes) X Y Z Total from point charges 4.592 6.821 -0.816 8.263 hybrid contribution -0.682 0.518 1.164 1.445 sum 3.909 7.339 0.348 8.323 Atomic orbital electron populations 1.23352 0.76428 1.05616 1.02289 1.86049 1.23485 1.26851 1.88393 1.19336 0.92611 0.84718 0.95495 1.20504 0.91758 0.98799 1.07463 1.21079 1.00061 0.90729 0.96015 1.17894 0.92979 0.89533 1.06920 1.20720 0.93157 0.94133 0.96618 1.77699 1.17627 0.93909 1.22536 1.48091 1.19878 1.07374 1.38832 1.21953 0.88501 1.00770 0.89937 1.21146 0.81051 0.78557 0.90924 1.90831 1.40667 1.41448 1.71008 1.45620 1.29399 1.54611 1.07220 1.21534 0.96980 1.00676 0.80942 1.22551 0.81889 0.98053 0.91112 1.92849 1.51707 1.95941 1.77869 1.23700 1.03534 0.93741 0.96593 1.22362 1.00489 0.95479 0.94654 0.88650 1.22188 0.90997 0.88405 0.97750 1.86431 1.48746 1.41540 1.63868 1.23624 1.02441 0.99376 0.92192 1.22843 0.88422 1.00789 0.94918 1.20538 1.02374 0.93156 1.11287 1.24606 0.81747 1.14043 0.95522 1.86436 1.43915 1.53019 1.52113 0.94027 0.85192 0.72263 0.79950 1.21776 0.93378 0.99117 0.94124 1.21403 1.01094 0.91593 1.09063 0.91903 0.91535 0.86314 0.84133 0.85072 0.83819 0.80291 0.74209 0.89536 0.91280 0.87631 0.89714 0.92364 0.92060 0.75240 0.89054 0.86934 0.76535 0.87520 0.76622 1.23382 1.18876 0.82369 0.83460 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.01 9.81 113.37 1.11 1.12 16 2 O -0.33 -2.85 10.49 -92.34 -0.97 -3.81 16 3 C 0.12 1.23 6.69 22.55 0.15 1.38 16 4 C -0.17 -1.67 9.97 22.33 0.22 -1.45 16 5 C -0.06 -0.65 9.74 22.46 0.22 -0.43 16 6 C -0.07 -0.82 5.80 -20.03 -0.12 -0.94 16 7 C 0.12 1.26 6.73 42.53 0.29 1.54 16 8 N -0.30 -3.51 11.63 -48.16 -0.56 -4.07 16 9 N -0.36 -0.99 3.40 -351.90 -1.20 -2.19 16 10 C 0.11 -0.66 6.99 85.63 0.60 -0.06 16 11 C 0.50 1.00 7.86 87.66 0.69 1.69 16 12 O -0.56 -7.95 15.70 -3.01 -0.05 -8.00 16 13 N -0.71 2.24 5.45 -463.06 -2.52 -0.28 16 14 C 0.12 -0.11 5.26 86.38 0.45 0.35 16 15 C 0.08 -0.29 1.91 -10.27 -0.02 -0.31 16 16 F -0.20 0.08 16.61 44.97 0.75 0.82 16 17 C -0.14 0.68 7.06 31.12 0.22 0.90 16 18 C -0.11 0.43 3.66 -10.27 -0.04 0.40 16 19 H 0.10 -0.16 7.72 -2.39 -0.02 -0.17 16 20 C 0.08 -0.38 6.89 71.98 0.50 0.12 16 21 O -0.60 0.63 13.66 -148.98 -2.03 -1.41 16 22 C -0.14 0.70 7.12 31.12 0.22 0.92 16 23 C 0.08 -0.09 9.96 83.47 0.83 0.74 16 24 C -0.26 -0.96 5.34 -19.95 -0.11 -1.07 16 25 C -0.05 -0.05 2.01 71.24 0.14 0.10 16 26 O -0.55 -1.60 10.09 -148.98 -1.50 -3.10 16 27 Si 0.78 -3.15 30.80 68.60 2.11 -1.04 16 28 C -0.07 -0.64 8.94 22.46 0.20 -0.44 16 29 C -0.21 -1.75 9.02 22.33 0.20 -1.55 16 30 H 0.06 -0.05 7.66 -2.39 -0.02 -0.07 16 31 H 0.07 -0.09 7.65 -2.39 -0.02 -0.11 16 32 H 0.12 -0.41 8.14 -2.39 -0.02 -0.43 16 33 H 0.14 1.01 8.06 -2.91 -0.02 0.99 16 34 H 0.13 1.27 8.06 -2.91 -0.02 1.25 16 35 H 0.14 -1.49 8.14 -2.38 -0.02 -1.51 16 36 H 0.18 -2.94 8.07 -2.39 -0.02 -2.96 16 37 H 0.42 -3.78 8.03 -92.71 -0.74 -4.53 16 38 H 0.09 0.03 7.39 -2.39 -0.02 0.01 16 39 H 0.07 0.17 8.14 -2.38 -0.02 0.15 16 40 H 0.11 -0.62 7.90 -2.39 -0.02 -0.64 16 41 H 0.08 -0.40 8.10 -2.38 -0.02 -0.42 16 42 H 0.06 -0.35 8.14 -2.39 -0.02 -0.37 16 43 H 0.06 -0.42 7.85 -2.38 -0.02 -0.44 16 44 H 0.40 -3.64 9.12 -74.06 -0.68 -4.32 16 45 H 0.09 -0.48 8.10 -2.39 -0.02 -0.50 16 46 H 0.11 -0.74 8.10 -2.39 -0.02 -0.76 16 47 H 0.22 -2.28 6.32 -2.91 -0.02 -2.30 16 48 H 0.11 0.23 7.84 -2.39 -0.02 0.21 16 49 H 0.38 -0.89 8.70 -74.06 -0.64 -1.53 16 50 H -0.31 -1.34 7.11 99.48 0.71 -0.63 16 51 H -0.26 0.90 7.00 99.48 0.70 1.59 16 52 H 0.16 1.38 4.51 -2.91 -0.01 1.37 16 53 H 0.15 0.53 6.28 -2.91 -0.02 0.51 16 Total: 0.00 -34.46 440.73 -1.25 -35.71 By element: Atomic # 1 Polarization: -14.58 SS G_CDS: -1.04 Total: -15.62 kcal Atomic # 6 Polarization: -2.77 SS G_CDS: 5.77 Total: 3.00 kcal Atomic # 7 Polarization: -2.27 SS G_CDS: -4.28 Total: -6.55 kcal Atomic # 8 Polarization: -11.77 SS G_CDS: -4.55 Total: -16.32 kcal Atomic # 9 Polarization: 0.08 SS G_CDS: 0.75 Total: 0.82 kcal Atomic # 14 Polarization: -3.15 SS G_CDS: 2.11 Total: -1.04 kcal Total: -34.46 -1.25 -35.71 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16500644_12622750.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -26.357 kcal (2) G-P(sol) polarization free energy of solvation -34.458 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -60.815 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.251 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.709 kcal (6) G-S(sol) free energy of system = (1) + (5) -62.066 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.72 seconds