Wall clock time and date at job start Sun Mar 7 2021 09:01:56 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42898 * 1 3 3 Si 1.86301 * 109.47206 * 2 1 4 4 C 1.50704 * 109.47221 * 119.99823 * 2 1 3 5 5 C 1.34833 * 125.65107 * 65.29854 * 4 2 1 6 6 C 1.40795 * 107.04981 * 180.15919 * 5 4 2 7 7 C 1.36109 * 106.73337 * 359.56997 * 6 5 4 8 8 C 1.47561 * 125.94610 * 180.29927 * 7 6 5 9 9 C 1.39921 * 119.95683 * 359.72818 * 8 7 6 10 10 C 1.36433 * 120.28025 * 179.75878 * 9 8 7 11 11 C 1.39880 * 120.18184 * 0.51472 * 10 9 8 12 12 C 1.47296 * 120.04114 * 179.72023 * 11 10 9 13 13 O 1.21620 * 119.99710 * 180.02562 * 12 11 10 14 14 N 1.34769 * 119.99974 * 0.02562 * 12 11 10 15 15 C 1.46508 * 119.99632 * 180.02562 * 14 12 11 16 16 C 1.53002 * 109.46759 * 180.02562 * 15 14 12 17 17 F 1.39905 * 112.84786 * 48.80972 * 16 15 14 18 18 C 1.53783 * 113.61062 * 180.02562 * 16 15 14 19 19 C 1.53785 * 87.08131 * 139.98588 * 18 16 15 20 20 H 1.09000 * 113.61293 * 220.02264 * 19 18 16 21 21 C 1.53002 * 113.61628 * 89.19772 * 19 18 16 22 22 O 1.42900 * 109.47073 * 175.00258 * 21 19 18 23 23 C 1.53777 * 113.61783 * 277.49861 * 16 15 14 24 24 C 1.40400 * 119.90712 * 359.74033 * 11 10 9 25 25 O 1.35686 * 120.13324 * 180.02562 * 24 11 10 26 26 C 1.38270 * 119.72922 * 359.97438 * 24 11 10 27 27 O 1.34226 * 125.65161 * 244.97880 * 4 2 1 28 28 H 0.96697 * 113.99755 * 300.00378 * 1 2 3 29 29 H 1.08999 * 109.47490 * 239.99782 * 2 1 3 30 30 H 1.48500 * 110.00036 * 299.99940 * 3 2 1 31 31 H 1.48497 * 110.00030 * 61.31762 * 3 2 1 32 32 H 1.07995 * 126.47634 * 359.97438 * 5 4 2 33 33 H 1.08002 * 126.63743 * 179.83926 * 6 5 4 34 34 H 1.08004 * 119.86052 * 0.02562 * 9 8 7 35 35 H 1.07995 * 119.90838 * 180.23485 * 10 9 8 36 36 H 0.97003 * 120.00766 * 0.02562 * 14 12 11 37 37 H 1.08990 * 109.47498 * 300.00169 * 15 14 12 38 38 H 1.08996 * 109.46875 * 60.00900 * 15 14 12 39 39 H 1.09003 * 113.61378 * 254.52998 * 18 16 15 40 40 H 1.08996 * 113.61493 * 25.35236 * 18 16 15 41 41 H 1.08993 * 109.47053 * 295.00328 * 21 19 18 42 42 H 1.08999 * 109.46676 * 55.00188 * 21 19 18 43 43 H 0.96691 * 113.99900 * 180.02562 * 22 21 19 44 44 H 1.09003 * 113.61436 * 334.56946 * 23 16 15 45 45 H 1.08999 * 113.61413 * 105.47031 * 23 16 15 46 46 H 0.96705 * 113.99498 * 269.97533 * 25 24 11 47 47 H 1.08003 * 120.09654 * 180.02562 * 26 24 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7104 1.2305 5 6 1.7617 -2.0192 1.5067 6 6 2.3802 -2.2627 2.7478 7 6 2.9080 -1.0784 3.1618 8 6 3.6580 -0.8543 4.4127 9 6 3.8743 -1.9165 5.2974 10 6 4.5711 -1.7179 6.4535 11 6 5.0650 -0.4474 6.7674 12 6 5.8115 -0.2351 8.0193 13 8 6.2403 0.8699 8.2917 14 7 6.0195 -1.2654 8.8628 15 6 6.7615 -1.0540 10.1083 16 6 6.8556 -2.3741 10.8761 17 9 7.2805 -3.4394 10.0750 18 6 7.6193 -2.2600 12.2061 19 6 6.5597 -3.2003 12.8046 20 1 6.2537 -2.9267 13.8144 21 6 6.9109 -4.6834 12.6714 22 8 5.9315 -5.4682 13.3546 23 6 5.6047 -2.6907 11.7127 24 6 4.8479 0.6251 5.8878 25 8 5.3254 1.8593 6.1875 26 6 4.1463 0.4183 4.7144 27 8 2.6271 -0.1463 2.2303 28 1 -0.3933 0.4417 0.7650 29 1 1.7924 -0.5139 -0.8899 30 1 1.5615 2.4679 -1.2085 31 1 1.5879 2.4586 1.2242 32 1 1.2459 -2.7431 0.8934 33 1 2.4304 -3.2076 3.2685 34 1 3.4918 -2.8988 5.0621 35 1 4.7378 -2.5428 7.1302 36 1 5.6779 -2.1469 8.6455 37 1 7.7648 -0.6963 9.8773 38 1 6.2435 -0.3144 10.7187 39 1 8.6191 -2.6931 12.1740 40 1 7.6059 -1.2571 12.6326 41 1 6.9270 -4.9597 11.6172 42 1 7.8923 -4.8651 13.1095 43 1 6.0913 -6.4208 13.3121 44 1 5.0396 -1.8057 12.0052 45 1 4.9776 -3.4714 11.2823 46 1 4.7092 2.4075 6.6924 47 1 3.9762 1.2390 4.0332 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16500644_12807986.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:01:56 Heat of formation + Delta-G solvation = -126.219253 kcal Electronic energy + Delta-G solvation = -33663.277294 eV Core-core repulsion = 28695.432613 eV Total energy + Delta-G solvation = -4967.844681 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 378.140 amu Computer time = 1.33 seconds Orbital eigenvalues (eV) -48.99560 -43.76423 -41.53543 -40.16043 -39.49433 -38.22086 -37.86632 -37.24433 -35.57626 -34.27597 -33.53349 -31.40467 -30.85507 -29.94575 -27.49736 -27.21192 -26.52423 -24.42051 -24.11413 -23.02286 -22.39760 -21.95187 -21.34092 -20.31051 -19.82637 -19.08610 -18.59767 -18.45144 -17.73788 -17.59438 -17.46755 -17.16890 -16.94794 -16.65122 -16.51560 -16.15172 -16.06021 -15.86187 -15.75703 -15.47682 -15.39017 -15.17030 -14.74253 -14.40633 -14.27143 -14.21844 -14.03900 -13.81209 -13.79246 -13.64401 -13.60280 -13.46980 -13.33369 -12.96972 -12.77102 -12.57946 -12.07670 -11.92749 -11.87026 -11.66234 -11.43530 -11.16148 -10.92911 -10.86311 -10.80282 -10.65256 -10.20900 -9.99217 -9.04766 -5.01295 -0.81604 0.08450 0.62806 1.08142 1.40455 1.42782 1.67594 1.89097 1.91910 1.95564 2.60856 2.83745 2.96037 2.98586 3.05811 3.11733 3.14362 3.31085 3.33958 3.51030 3.62665 3.75852 3.81950 3.87953 3.91857 4.09164 4.13417 4.26689 4.28446 4.33380 4.34708 4.38647 4.45642 4.49621 4.54335 4.56515 4.64409 4.70442 4.74323 4.76657 4.81373 4.94890 4.97147 5.05199 5.10770 5.14531 5.25355 5.35434 5.43276 5.92208 6.19405 6.34472 6.58756 6.65854 7.14176 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.520 6.520 2 C -0.035 4.035 3 Si 0.698 3.302 4 C -0.043 4.043 5 C -0.173 4.173 6 C -0.177 4.177 7 C 0.023 3.977 8 C 0.031 3.969 9 C -0.116 4.116 10 C -0.063 4.063 11 C -0.165 4.165 12 C 0.561 3.439 13 O -0.517 6.517 14 N -0.727 5.727 15 C 0.114 3.886 16 C 0.077 3.923 17 F -0.184 7.184 18 C -0.141 4.141 19 C -0.111 4.111 20 H 0.096 0.904 21 C 0.085 3.915 22 O -0.573 6.573 23 C -0.146 4.146 24 C 0.179 3.821 25 O -0.474 6.474 26 C -0.141 4.141 27 O -0.162 6.162 28 H 0.381 0.619 29 H 0.138 0.862 30 H -0.247 1.247 31 H -0.255 1.255 32 H 0.156 0.844 33 H 0.156 0.844 34 H 0.139 0.861 35 H 0.136 0.864 36 H 0.402 0.598 37 H 0.083 0.917 38 H 0.091 0.909 39 H 0.088 0.912 40 H 0.111 0.889 41 H 0.058 0.942 42 H 0.051 0.949 43 H 0.383 0.617 44 H 0.104 0.896 45 H 0.085 0.915 46 H 0.399 0.601 47 H 0.144 0.856 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.259 -3.544 1.425 3.829 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.327 6.327 2 C -0.144 4.144 3 Si 0.597 3.403 4 C -0.094 4.094 5 C -0.192 4.192 6 C -0.196 4.196 7 C -0.027 4.027 8 C 0.031 3.969 9 C -0.134 4.134 10 C -0.082 4.082 11 C -0.169 4.169 12 C 0.348 3.652 13 O -0.393 6.393 14 N -0.380 5.380 15 C -0.010 4.010 16 C 0.058 3.942 17 F -0.164 7.164 18 C -0.179 4.179 19 C -0.130 4.130 20 H 0.115 0.885 21 C 0.007 3.993 22 O -0.379 6.379 23 C -0.184 4.184 24 C 0.133 3.867 25 O -0.285 6.285 26 C -0.159 4.159 27 O -0.059 6.059 28 H 0.229 0.771 29 H 0.156 0.844 30 H -0.172 1.172 31 H -0.179 1.179 32 H 0.173 0.827 33 H 0.174 0.826 34 H 0.157 0.843 35 H 0.154 0.846 36 H 0.238 0.762 37 H 0.101 0.899 38 H 0.109 0.891 39 H 0.107 0.893 40 H 0.129 0.871 41 H 0.076 0.924 42 H 0.069 0.931 43 H 0.230 0.770 44 H 0.123 0.877 45 H 0.104 0.896 46 H 0.257 0.743 47 H 0.162 0.838 Dipole moment (debyes) X Y Z Total from point charges 0.279 -1.500 0.908 1.775 hybrid contribution -1.289 -1.466 0.488 2.012 sum -1.010 -2.966 1.396 3.430 Atomic orbital electron populations 1.86667 1.16643 1.80154 1.49242 1.24358 0.84012 1.12212 0.93833 0.94403 0.91487 0.73294 0.81087 1.22940 1.00572 0.93790 0.92062 1.21586 1.04020 0.95649 0.97960 1.21917 1.01982 0.98383 0.97295 1.20319 1.03787 0.87563 0.90993 1.17756 0.95568 0.93678 0.89939 1.20708 1.00187 0.98719 0.93768 1.20828 0.95248 0.95514 0.96611 1.20440 1.04853 0.95148 0.96450 1.17951 0.79824 0.84394 0.83030 1.90853 1.49718 1.23552 1.75145 1.45739 1.58010 1.12697 1.21597 1.21806 0.98409 0.95450 0.85303 1.22238 0.98169 0.84282 0.89511 1.92848 1.90989 1.57550 1.75050 1.23564 0.99358 1.01824 0.93156 1.22253 0.96467 0.93666 1.00588 0.88520 1.22062 0.90930 0.89801 0.96478 1.86445 1.51778 1.22000 1.77692 1.23658 0.95858 1.03075 0.95789 1.18268 0.91336 0.85731 0.91398 1.84781 1.44592 1.22718 1.76421 1.21586 0.98742 0.97532 0.98065 1.83949 1.57545 1.37922 1.26466 0.77113 0.84401 1.17164 1.17928 0.82662 0.82600 0.84302 0.84627 0.76183 0.89926 0.89056 0.89329 0.87093 0.92393 0.93109 0.76968 0.87721 0.89604 0.74267 0.83802 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.52 -0.18 12.88 -35.23 -0.45 -0.64 16 2 C -0.03 0.03 2.98 36.01 0.11 0.13 16 3 Si 0.70 -0.61 32.11 -169.99 -5.46 -6.06 16 4 C -0.04 -0.02 6.21 -35.51 -0.22 -0.24 16 5 C -0.17 -0.06 10.78 -39.82 -0.43 -0.49 16 6 C -0.18 0.00 10.26 -39.38 -0.40 -0.40 16 7 C 0.02 0.02 7.02 -36.55 -0.26 -0.23 16 8 C 0.03 0.01 5.87 -104.95 -0.62 -0.60 16 9 C -0.12 0.15 9.48 -39.60 -0.38 -0.22 16 10 C -0.06 0.09 9.47 -39.62 -0.38 -0.29 16 11 C -0.17 -0.19 5.89 -104.79 -0.62 -0.81 16 12 C 0.56 1.33 7.75 -12.58 -0.10 1.23 16 13 O -0.52 -2.97 15.14 -16.69 -0.25 -3.22 16 14 N -0.73 0.22 5.42 -61.42 -0.33 -0.11 16 15 C 0.11 -0.10 5.36 -4.04 -0.02 -0.12 16 16 C 0.08 -0.13 1.66 -89.81 -0.15 -0.28 16 17 F -0.18 -0.01 15.02 2.25 0.03 0.03 16 18 C -0.14 0.36 7.13 -25.92 -0.18 0.17 16 19 C -0.11 0.16 4.19 -89.82 -0.38 -0.22 16 20 H 0.10 -0.10 8.14 -51.93 -0.42 -0.52 16 21 C 0.08 -0.08 6.66 37.16 0.25 0.17 16 22 O -0.57 -0.12 13.66 -35.23 -0.48 -0.60 16 23 C -0.15 0.29 7.07 -25.94 -0.18 0.11 16 24 C 0.18 0.32 6.71 -38.76 -0.26 0.06 16 25 O -0.47 -1.16 11.56 -40.72 -0.47 -1.63 16 26 C -0.14 -0.13 9.65 -39.06 -0.38 -0.51 16 27 O -0.16 -0.22 8.79 4.72 0.04 -0.18 16 28 H 0.38 -0.89 8.70 45.56 0.40 -0.49 16 29 H 0.14 -0.31 7.96 -51.93 -0.41 -0.73 16 30 H -0.25 -0.40 7.11 56.52 0.40 0.00 16 31 H -0.26 -0.44 7.11 56.52 0.40 -0.04 16 32 H 0.16 -0.13 8.06 -52.49 -0.42 -0.55 16 33 H 0.16 -0.36 7.24 -52.49 -0.38 -0.74 16 34 H 0.14 -0.50 6.95 -52.48 -0.36 -0.86 16 35 H 0.14 -0.54 6.37 -52.49 -0.33 -0.88 16 36 H 0.40 -0.88 6.19 -40.82 -0.25 -1.13 16 37 H 0.08 0.01 8.14 -51.93 -0.42 -0.41 16 38 H 0.09 -0.12 7.94 -51.93 -0.41 -0.53 16 39 H 0.09 -0.22 8.10 -51.93 -0.42 -0.64 16 40 H 0.11 -0.43 8.10 -51.93 -0.42 -0.85 16 41 H 0.06 -0.05 6.32 -51.93 -0.33 -0.38 16 42 H 0.05 -0.08 8.14 -51.93 -0.42 -0.51 16 43 H 0.38 -1.47 9.12 45.56 0.42 -1.05 16 44 H 0.10 -0.30 7.96 -51.93 -0.41 -0.72 16 45 H 0.09 -0.12 8.10 -51.93 -0.42 -0.54 16 46 H 0.40 -0.54 9.06 45.56 0.41 -0.13 16 47 H 0.14 0.04 7.90 -52.48 -0.41 -0.37 16 LS Contribution 401.44 15.07 6.05 6.05 Total: 0.00 -10.84 401.44 -10.15 -20.99 By element: Atomic # 1 Polarization: -7.85 SS G_CDS: -4.24 Total: -12.09 kcal Atomic # 6 Polarization: 2.05 SS G_CDS: -4.59 Total: -2.54 kcal Atomic # 7 Polarization: 0.22 SS G_CDS: -0.33 Total: -0.11 kcal Atomic # 8 Polarization: -4.64 SS G_CDS: -1.62 Total: -6.26 kcal Atomic # 9 Polarization: -0.01 SS G_CDS: 0.03 Total: 0.03 kcal Atomic # 14 Polarization: -0.61 SS G_CDS: -5.46 Total: -6.06 kcal Total LS contribution 6.05 Total: 6.05 kcal Total: -10.84 -10.15 -20.99 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16500644_12807986.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -105.227 kcal (2) G-P(sol) polarization free energy of solvation -10.839 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -116.066 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.153 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.992 kcal (6) G-S(sol) free energy of system = (1) + (5) -126.219 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.33 seconds