Wall clock time and date at job start Sun Mar 7 2021 09:01:59 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50699 * 1 3 3 C 1.39276 * 121.02899 * 2 1 4 4 C 1.46494 * 134.19979 * 359.97438 * 3 2 1 5 5 C 1.50701 * 126.59796 * 359.97438 * 4 3 2 6 6 O 1.42904 * 109.46707 * 284.70953 * 5 4 3 7 7 Si 1.86299 * 109.46952 * 164.71308 * 5 4 3 8 8 C 1.34180 * 106.80185 * 179.72405 * 4 3 2 9 9 N 1.36946 * 109.95304 * 0.25783 * 8 4 3 10 10 C 1.37160 * 110.11357 * 0.02562 * 9 8 4 11 11 N 1.32819 * 132.96583 * 179.97438 * 10 9 8 12 12 C 1.31313 * 121.88410 * 179.17503 * 11 10 9 13 13 C 1.39748 * 121.02958 * 179.97438 * 2 1 3 14 14 C 1.47664 * 120.45722 * 0.02562 * 13 2 1 15 15 O 1.21572 * 120.00102 * 5.98953 * 14 13 2 16 16 N 1.34778 * 119.99982 * 185.98627 * 14 13 2 17 17 C 1.46502 * 119.99863 * 179.97438 * 16 14 13 18 18 C 1.53002 * 109.47224 * 180.02562 * 17 16 14 19 19 F 1.39908 * 112.84490 * 316.19666 * 18 17 16 20 20 C 1.53775 * 113.61490 * 87.49966 * 18 17 16 21 21 C 1.53780 * 87.08111 * 89.12157 * 20 18 17 22 22 H 1.09007 * 113.68562 * 270.87241 * 21 20 18 23 23 C 1.53001 * 113.61713 * 139.98266 * 21 20 18 24 24 O 1.42894 * 109.47080 * 87.49924 * 23 21 20 25 25 C 1.53774 * 113.61616 * 185.00260 * 18 17 16 26 26 H 1.09002 * 109.47046 * 96.28918 * 1 2 3 27 27 H 1.09001 * 109.47162 * 216.28693 * 1 2 3 28 28 H 1.09001 * 109.47621 * 336.29088 * 1 2 3 29 29 H 1.08995 * 109.47298 * 44.71476 * 5 4 3 30 30 H 0.96697 * 113.99897 * 299.99358 * 6 5 4 31 31 H 1.48500 * 110.00357 * 58.68272 * 7 5 4 32 32 H 1.48503 * 109.99988 * 180.02562 * 7 5 4 33 33 H 1.08001 * 125.02246 * 180.23052 * 8 4 3 34 34 H 0.97003 * 124.94129 * 180.02562 * 9 8 4 35 35 H 1.08005 * 119.30869 * 180.27270 * 12 11 10 36 36 H 0.96997 * 120.00035 * 359.97438 * 16 14 13 37 37 H 1.09004 * 109.47383 * 299.99842 * 17 16 14 38 38 H 1.09000 * 109.47004 * 60.00105 * 17 16 14 39 39 H 1.09003 * 113.61686 * 203.66605 * 20 18 17 40 40 H 1.08998 * 113.61764 * 334.56830 * 20 18 17 41 41 H 1.09001 * 109.46649 * 207.50077 * 23 21 20 42 42 H 1.09003 * 109.46965 * 327.49826 * 23 21 20 43 43 H 0.96705 * 114.00241 * 179.97438 * 24 23 21 44 44 H 1.09000 * 113.61752 * 25.42506 * 25 18 17 45 45 H 1.08999 * 113.61673 * 156.33489 * 25 18 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2249 1.1935 0.0000 4 6 1.8514 2.6100 -0.0005 5 6 0.4524 3.1703 -0.0017 6 8 -0.1158 3.0296 -1.3053 7 14 0.5056 4.9741 0.4613 8 6 2.9946 3.3125 0.0060 9 7 4.0667 2.4605 0.0048 10 6 3.6347 1.1588 -0.0033 11 7 4.2720 -0.0065 -0.0079 12 6 3.6266 -1.1501 0.0005 13 6 2.2274 -1.1975 0.0005 14 6 1.5225 -2.4950 0.0005 15 8 0.3123 -2.5294 -0.1098 16 7 2.2208 -3.6413 0.1228 17 6 1.5214 -4.9286 0.1234 18 6 2.5384 -6.0616 0.2750 19 9 3.6715 -5.8852 -0.5265 20 6 2.8639 -6.4055 1.7380 21 6 1.6888 -7.3960 1.6842 22 1 0.7313 -6.9550 1.9615 23 6 1.9663 -8.7161 2.4063 24 8 1.6155 -8.5874 3.7856 25 6 1.9186 -7.4646 0.1652 26 1 -0.3633 -0.1126 -1.0215 27 1 -0.3633 -0.8284 0.6082 28 1 -0.3634 0.9409 0.4132 29 1 -0.1570 2.6276 0.7209 30 1 0.3758 3.4883 -2.0002 31 1 1.3593 5.7198 -0.4981 32 1 -0.8681 5.5383 0.4643 33 1 3.0595 4.3906 0.0110 34 1 4.9964 2.7374 0.0089 35 1 4.1870 -2.0734 0.0008 36 1 3.1864 -3.6140 0.2104 37 1 0.8173 -4.9592 0.9549 38 1 0.9804 -5.0486 -0.8153 39 1 3.8338 -6.8855 1.8683 40 1 2.7048 -5.5763 2.4273 41 1 1.3727 -9.5099 1.9529 42 1 3.0252 -8.9607 2.3220 43 1 1.7652 -9.3886 4.3059 44 1 0.9962 -7.4903 -0.4151 45 1 2.6300 -8.2340 -0.1344 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16500644_12890568.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:01:59 Heat of formation + Delta-G solvation = -60.277675 kcal Electronic energy + Delta-G solvation = -30833.738182 eV Core-core repulsion = 26347.954026 eV Total energy + Delta-G solvation = -4485.784156 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 350.147 amu Computer time = 1.15 seconds Orbital eigenvalues (eV) -48.73168 -42.83163 -40.95153 -40.11157 -38.69804 -37.83858 -37.31334 -35.76057 -34.80045 -31.99147 -31.47204 -29.81469 -28.78325 -27.29570 -27.08044 -26.31323 -24.53297 -23.81224 -22.88340 -21.74946 -20.71849 -20.37321 -19.29079 -18.84501 -18.35351 -17.93753 -17.60690 -17.37836 -16.98191 -16.75274 -16.68513 -16.41652 -16.18492 -15.88546 -15.65235 -15.54496 -15.45013 -15.01841 -14.82971 -14.66229 -14.42897 -14.07220 -13.97917 -13.75820 -13.65455 -13.52792 -13.39091 -13.19379 -12.96152 -12.87271 -12.45194 -12.41928 -12.20052 -11.82164 -11.60766 -11.42702 -11.18750 -11.02134 -10.96806 -10.49062 -10.21427 -10.15933 -9.57714 -9.12829 -5.00240 -0.21476 -0.03620 1.23609 1.38132 1.50893 1.61877 1.92201 1.93954 1.98330 2.85851 2.88941 3.05856 3.14544 3.16160 3.31682 3.37371 3.39481 3.52631 3.60396 3.74390 3.78351 3.82985 4.09733 4.14271 4.21992 4.25337 4.29306 4.32090 4.42460 4.42991 4.49830 4.51692 4.58038 4.64008 4.67607 4.79787 4.82564 4.91761 5.01139 5.07755 5.20748 5.21917 5.30021 5.40818 5.57025 5.79258 6.10808 6.41525 6.45344 6.59238 6.87505 7.20901 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.124 4.124 2 C 0.087 3.913 3 C -0.149 4.149 4 C -0.176 4.176 5 C -0.044 4.044 6 O -0.526 6.526 7 Si 0.685 3.315 8 C 0.067 3.933 9 N -0.569 5.569 10 C 0.309 3.691 11 N -0.504 5.504 12 C 0.182 3.818 13 C -0.234 4.234 14 C 0.574 3.426 15 O -0.528 6.528 16 N -0.727 5.727 17 C 0.122 3.878 18 C 0.078 3.922 19 F -0.195 7.195 20 C -0.146 4.146 21 C -0.108 4.108 22 H 0.107 0.893 23 C 0.087 3.913 24 O -0.573 6.573 25 C -0.141 4.141 26 H 0.086 0.914 27 H 0.097 0.903 28 H 0.070 0.930 29 H 0.120 0.880 30 H 0.374 0.626 31 H -0.258 1.258 32 H -0.254 1.254 33 H 0.183 0.817 34 H 0.425 0.575 35 H 0.162 0.838 36 H 0.403 0.597 37 H 0.093 0.907 38 H 0.085 0.915 39 H 0.098 0.902 40 H 0.085 0.915 41 H 0.051 0.949 42 H 0.049 0.951 43 H 0.382 0.618 44 H 0.089 0.911 45 H 0.102 0.898 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.079 -0.307 2.691 4.100 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.180 4.180 2 C 0.078 3.922 3 C -0.156 4.156 4 C -0.184 4.184 5 C -0.154 4.154 6 O -0.332 6.332 7 Si 0.585 3.415 8 C -0.060 4.060 9 N -0.175 5.175 10 C 0.075 3.925 11 N -0.217 5.217 12 C 0.013 3.987 13 C -0.241 4.241 14 C 0.363 3.637 15 O -0.405 6.405 16 N -0.380 5.380 17 C -0.002 4.002 18 C 0.060 3.940 19 F -0.175 7.175 20 C -0.184 4.184 21 C -0.127 4.127 22 H 0.125 0.875 23 C 0.009 3.991 24 O -0.379 6.379 25 C -0.179 4.179 26 H 0.105 0.895 27 H 0.115 0.885 28 H 0.089 0.911 29 H 0.137 0.863 30 H 0.222 0.778 31 H -0.183 1.183 32 H -0.178 1.178 33 H 0.200 0.800 34 H 0.264 0.736 35 H 0.179 0.821 36 H 0.239 0.761 37 H 0.111 0.889 38 H 0.103 0.897 39 H 0.117 0.883 40 H 0.104 0.896 41 H 0.069 0.931 42 H 0.068 0.932 43 H 0.230 0.770 44 H 0.108 0.892 45 H 0.121 0.879 Dipole moment (debyes) X Y Z Total from point charges 2.483 0.912 2.460 3.613 hybrid contribution 0.715 -0.775 -1.146 1.557 sum 3.198 0.137 1.314 3.460 Atomic orbital electron populations 1.21186 0.88678 1.03767 1.04334 1.19914 0.97163 0.89113 0.85978 1.19453 0.92774 0.93520 1.09878 1.20616 0.95227 0.91016 1.11508 1.24471 0.90974 1.11710 0.88292 1.86638 1.54274 1.75831 1.16409 0.95170 0.82644 0.73603 0.90035 1.21793 0.85111 0.95955 1.03133 1.41514 1.09598 1.02708 1.63672 1.18509 0.89347 0.85892 0.98707 1.66451 1.40529 0.95986 1.18688 1.22532 0.90092 0.94476 0.91554 1.20370 0.94751 0.93559 1.15445 1.17837 0.86754 0.83112 0.76040 1.90769 1.13463 1.86998 1.49291 1.45689 1.11168 1.05286 1.75871 1.21614 0.93658 0.80432 1.04487 1.22593 0.84030 0.96062 0.91334 1.92867 1.52614 1.96502 1.75558 1.23735 0.99954 1.00344 0.94326 1.22388 1.00052 0.95936 0.94311 0.87450 1.22111 0.98713 0.96279 0.82021 1.86483 1.89213 1.41540 1.20643 1.23604 1.02644 0.95326 0.96367 0.89535 0.88474 0.91130 0.86268 0.77836 1.18271 1.17822 0.79968 0.73585 0.82066 0.76080 0.88902 0.89662 0.88319 0.89601 0.93083 0.93237 0.77026 0.89206 0.87914 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 -0.38 8.69 36.01 0.31 -0.07 16 2 C 0.09 0.29 5.98 -103.67 -0.62 -0.33 16 3 C -0.15 -0.40 6.16 -105.13 -0.65 -1.05 16 4 C -0.18 -0.05 5.57 -102.73 -0.57 -0.62 16 5 C -0.04 0.02 2.07 36.01 0.07 0.09 16 6 O -0.53 -0.56 12.88 -35.23 -0.45 -1.01 16 7 Si 0.69 -1.41 30.83 -169.99 -5.24 -6.65 16 8 C 0.07 -0.11 10.44 -16.70 -0.17 -0.29 16 9 N -0.57 0.40 6.04 -12.12 -0.07 0.32 16 10 C 0.31 0.77 8.42 -155.71 -1.31 -0.54 16 11 N -0.50 -1.52 10.37 -11.95 -0.12 -1.65 16 12 C 0.18 0.30 10.67 -17.11 -0.18 0.12 16 13 C -0.23 -0.64 5.89 -104.82 -0.62 -1.26 16 14 C 0.57 1.69 7.72 -12.41 -0.10 1.60 16 15 O -0.53 -2.95 13.49 5.30 0.07 -2.87 16 16 N -0.73 -0.31 5.40 -61.30 -0.33 -0.64 16 17 C 0.12 -0.03 5.27 -4.04 -0.02 -0.05 16 18 C 0.08 -0.08 1.91 -89.81 -0.17 -0.25 16 19 F -0.20 -0.18 16.61 2.25 0.04 -0.14 16 20 C -0.15 0.21 7.06 -25.92 -0.18 0.03 16 21 C -0.11 0.18 3.66 -89.81 -0.33 -0.15 16 22 H 0.11 -0.12 7.72 -51.93 -0.40 -0.52 16 23 C 0.09 -0.15 6.88 37.16 0.26 0.11 16 24 O -0.57 0.06 13.66 -35.23 -0.48 -0.42 16 25 C -0.14 0.31 7.13 -25.92 -0.18 0.13 16 26 H 0.09 0.34 8.14 -51.93 -0.42 -0.08 16 27 H 0.10 0.39 5.95 -51.93 -0.31 0.08 16 28 H 0.07 0.14 5.05 -51.93 -0.26 -0.12 16 29 H 0.12 -0.06 6.03 -51.93 -0.31 -0.37 16 30 H 0.37 -0.67 8.70 45.56 0.40 -0.28 16 31 H -0.26 0.25 7.00 56.52 0.40 0.65 16 32 H -0.25 -0.40 7.11 56.52 0.40 0.00 16 33 H 0.18 -0.89 6.28 -52.49 -0.33 -1.22 16 34 H 0.43 -1.37 8.96 -40.82 -0.37 -1.73 16 35 H 0.16 -0.23 6.43 -52.48 -0.34 -0.56 16 36 H 0.40 -0.49 6.10 -40.82 -0.25 -0.74 16 37 H 0.09 -0.03 7.39 -51.93 -0.38 -0.42 16 38 H 0.09 0.02 8.14 -51.93 -0.42 -0.40 16 39 H 0.10 -0.16 7.90 -51.93 -0.41 -0.57 16 40 H 0.09 -0.10 8.10 -51.93 -0.42 -0.52 16 41 H 0.05 -0.13 8.14 -51.93 -0.42 -0.55 16 42 H 0.05 -0.12 7.84 -51.93 -0.41 -0.53 16 43 H 0.38 -1.59 9.12 45.56 0.42 -1.18 16 44 H 0.09 -0.26 8.10 -51.93 -0.42 -0.68 16 45 H 0.10 -0.27 8.10 -51.93 -0.42 -0.69 16 LS Contribution 369.09 15.07 5.56 5.56 Total: 0.00 -10.28 369.09 -10.19 -20.47 By element: Atomic # 1 Polarization: -5.74 SS G_CDS: -4.69 Total: -10.43 kcal Atomic # 6 Polarization: 1.93 SS G_CDS: -4.47 Total: -2.54 kcal Atomic # 7 Polarization: -1.43 SS G_CDS: -0.53 Total: -1.96 kcal Atomic # 8 Polarization: -3.44 SS G_CDS: -0.86 Total: -4.30 kcal Atomic # 9 Polarization: -0.18 SS G_CDS: 0.04 Total: -0.14 kcal Atomic # 14 Polarization: -1.41 SS G_CDS: -5.24 Total: -6.65 kcal Total LS contribution 5.56 Total: 5.56 kcal Total: -10.28 -10.19 -20.47 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16500644_12890568.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -39.810 kcal (2) G-P(sol) polarization free energy of solvation -10.280 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -50.089 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.188 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.468 kcal (6) G-S(sol) free energy of system = (1) + (5) -60.278 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.15 seconds