Wall clock time and date at job start Sun Mar 7 2021 09:01:58 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50699 * 1 3 3 C 1.39276 * 121.02899 * 2 1 4 4 C 1.46494 * 134.19979 * 359.97438 * 3 2 1 5 5 C 1.50701 * 126.59796 * 359.97438 * 4 3 2 6 6 O 1.42904 * 109.46707 * 284.70953 * 5 4 3 7 7 Si 1.86299 * 109.46952 * 164.71308 * 5 4 3 8 8 C 1.34180 * 106.80185 * 179.72405 * 4 3 2 9 9 N 1.36946 * 109.95304 * 0.25783 * 8 4 3 10 10 C 1.37160 * 110.11357 * 0.02562 * 9 8 4 11 11 N 1.32819 * 132.96583 * 179.97438 * 10 9 8 12 12 C 1.31313 * 121.88410 * 179.17503 * 11 10 9 13 13 C 1.39748 * 121.02958 * 179.97438 * 2 1 3 14 14 C 1.47664 * 120.45722 * 0.02562 * 13 2 1 15 15 O 1.21572 * 120.00102 * 5.98953 * 14 13 2 16 16 N 1.34778 * 119.99982 * 185.98627 * 14 13 2 17 17 C 1.46502 * 119.99863 * 179.97438 * 16 14 13 18 18 C 1.53002 * 109.47224 * 180.02562 * 17 16 14 19 19 F 1.39908 * 112.84490 * 316.19666 * 18 17 16 20 20 C 1.53775 * 113.61490 * 87.49966 * 18 17 16 21 21 C 1.53780 * 87.08111 * 89.12157 * 20 18 17 22 22 H 1.09007 * 113.68562 * 270.87241 * 21 20 18 23 23 C 1.53001 * 113.61713 * 139.98266 * 21 20 18 24 24 O 1.42894 * 109.47080 * 87.49924 * 23 21 20 25 25 C 1.53774 * 113.61616 * 185.00260 * 18 17 16 26 26 H 1.09002 * 109.47046 * 96.28918 * 1 2 3 27 27 H 1.09001 * 109.47162 * 216.28693 * 1 2 3 28 28 H 1.09001 * 109.47621 * 336.29088 * 1 2 3 29 29 H 1.08995 * 109.47298 * 44.71476 * 5 4 3 30 30 H 0.96697 * 113.99897 * 299.99358 * 6 5 4 31 31 H 1.48500 * 110.00357 * 58.68272 * 7 5 4 32 32 H 1.48503 * 109.99988 * 180.02562 * 7 5 4 33 33 H 1.08001 * 125.02246 * 180.23052 * 8 4 3 34 34 H 0.97003 * 124.94129 * 180.02562 * 9 8 4 35 35 H 1.08005 * 119.30869 * 180.27270 * 12 11 10 36 36 H 0.96997 * 120.00035 * 359.97438 * 16 14 13 37 37 H 1.09004 * 109.47383 * 299.99842 * 17 16 14 38 38 H 1.09000 * 109.47004 * 60.00105 * 17 16 14 39 39 H 1.09003 * 113.61686 * 203.66605 * 20 18 17 40 40 H 1.08998 * 113.61764 * 334.56830 * 20 18 17 41 41 H 1.09001 * 109.46649 * 207.50077 * 23 21 20 42 42 H 1.09003 * 109.46965 * 327.49826 * 23 21 20 43 43 H 0.96705 * 114.00241 * 179.97438 * 24 23 21 44 44 H 1.09000 * 113.61752 * 25.42506 * 25 18 17 45 45 H 1.08999 * 113.61673 * 156.33489 * 25 18 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2249 1.1935 0.0000 4 6 1.8514 2.6100 -0.0005 5 6 0.4524 3.1703 -0.0017 6 8 -0.1158 3.0296 -1.3053 7 14 0.5056 4.9741 0.4613 8 6 2.9946 3.3125 0.0060 9 7 4.0667 2.4605 0.0048 10 6 3.6347 1.1588 -0.0033 11 7 4.2720 -0.0065 -0.0079 12 6 3.6266 -1.1501 0.0005 13 6 2.2274 -1.1975 0.0005 14 6 1.5225 -2.4950 0.0005 15 8 0.3123 -2.5294 -0.1098 16 7 2.2208 -3.6413 0.1228 17 6 1.5214 -4.9286 0.1234 18 6 2.5384 -6.0616 0.2750 19 9 3.6715 -5.8852 -0.5265 20 6 2.8639 -6.4055 1.7380 21 6 1.6888 -7.3960 1.6842 22 1 0.7313 -6.9550 1.9615 23 6 1.9663 -8.7161 2.4063 24 8 1.6155 -8.5874 3.7856 25 6 1.9186 -7.4646 0.1652 26 1 -0.3633 -0.1126 -1.0215 27 1 -0.3633 -0.8284 0.6082 28 1 -0.3634 0.9409 0.4132 29 1 -0.1570 2.6276 0.7209 30 1 0.3758 3.4883 -2.0002 31 1 1.3593 5.7198 -0.4981 32 1 -0.8681 5.5383 0.4643 33 1 3.0595 4.3906 0.0110 34 1 4.9964 2.7374 0.0089 35 1 4.1870 -2.0734 0.0008 36 1 3.1864 -3.6140 0.2104 37 1 0.8173 -4.9592 0.9549 38 1 0.9804 -5.0486 -0.8153 39 1 3.8338 -6.8855 1.8683 40 1 2.7048 -5.5763 2.4273 41 1 1.3727 -9.5099 1.9529 42 1 3.0252 -8.9607 2.3220 43 1 1.7652 -9.3886 4.3059 44 1 0.9962 -7.4903 -0.4151 45 1 2.6300 -8.2340 -0.1344 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16500644_12890568.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:01:58 Heat of formation + Delta-G solvation = -64.198241 kcal Electronic energy + Delta-G solvation = -30833.908191 eV Core-core repulsion = 26347.954026 eV Total energy + Delta-G solvation = -4485.954165 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 350.147 amu Computer time = 1.17 seconds Orbital eigenvalues (eV) -48.74708 -42.88601 -41.08893 -40.05205 -38.79304 -37.85144 -37.24363 -35.88293 -34.95908 -32.03972 -31.53758 -29.79781 -28.92729 -27.25572 -26.97640 -26.29984 -24.62481 -23.90339 -22.81178 -21.90300 -20.72291 -20.30853 -19.36704 -18.90046 -18.24646 -17.95236 -17.66654 -17.39411 -17.02423 -16.76745 -16.66872 -16.47058 -16.27269 -15.93195 -15.64042 -15.57453 -15.43915 -14.97359 -14.85460 -14.71706 -14.50971 -14.08544 -14.02221 -13.80662 -13.72767 -13.64811 -13.37735 -13.32463 -13.09789 -12.78763 -12.47493 -12.34060 -12.11015 -11.80296 -11.52804 -11.35375 -11.30563 -11.17683 -10.82615 -10.61441 -10.31201 -10.28844 -9.66904 -9.14879 -4.83712 -0.38716 -0.12015 1.35139 1.39780 1.61694 1.66678 1.72316 1.88958 2.05066 2.70829 3.01591 3.10700 3.23449 3.25827 3.31305 3.43123 3.48357 3.54897 3.58996 3.68009 3.69467 3.93022 4.10967 4.21465 4.26150 4.29492 4.36294 4.37649 4.39316 4.53941 4.57748 4.60956 4.67492 4.68820 4.69171 4.74410 4.79209 4.92091 4.96101 5.02463 5.14601 5.21720 5.24981 5.33979 5.38684 5.70659 6.19291 6.30841 6.59326 6.79551 6.88837 7.03216 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.113 4.113 2 C 0.066 3.934 3 C -0.165 4.165 4 C -0.195 4.195 5 C -0.060 4.060 6 O -0.549 6.549 7 Si 0.781 3.219 8 C 0.091 3.909 9 N -0.559 5.559 10 C 0.290 3.710 11 N -0.516 5.516 12 C 0.180 3.820 13 C -0.242 4.242 14 C 0.573 3.427 15 O -0.561 6.561 16 N -0.715 5.715 17 C 0.122 3.878 18 C 0.079 3.921 19 F -0.205 7.205 20 C -0.143 4.143 21 C -0.109 4.109 22 H 0.099 0.901 23 C 0.084 3.916 24 O -0.597 6.597 25 C -0.134 4.134 26 H 0.071 0.929 27 H 0.084 0.916 28 H 0.077 0.923 29 H 0.112 0.888 30 H 0.385 0.615 31 H -0.259 1.259 32 H -0.308 1.308 33 H 0.222 0.778 34 H 0.439 0.561 35 H 0.187 0.813 36 H 0.412 0.588 37 H 0.093 0.907 38 H 0.080 0.920 39 H 0.103 0.897 40 H 0.080 0.920 41 H 0.060 0.940 42 H 0.059 0.941 43 H 0.397 0.603 44 H 0.096 0.904 45 H 0.111 0.889 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.637 0.366 2.884 5.473 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.168 4.168 2 C 0.057 3.943 3 C -0.172 4.172 4 C -0.203 4.203 5 C -0.168 4.168 6 O -0.357 6.357 7 Si 0.683 3.317 8 C -0.036 4.036 9 N -0.166 5.166 10 C 0.056 3.944 11 N -0.229 5.229 12 C 0.011 3.989 13 C -0.249 4.249 14 C 0.362 3.638 15 O -0.441 6.441 16 N -0.368 5.368 17 C -0.002 4.002 18 C 0.060 3.940 19 F -0.186 7.186 20 C -0.181 4.181 21 C -0.128 4.128 22 H 0.117 0.883 23 C 0.006 3.994 24 O -0.406 6.406 25 C -0.172 4.172 26 H 0.089 0.911 27 H 0.102 0.898 28 H 0.096 0.904 29 H 0.129 0.871 30 H 0.234 0.766 31 H -0.184 1.184 32 H -0.236 1.236 33 H 0.238 0.762 34 H 0.280 0.720 35 H 0.204 0.796 36 H 0.249 0.751 37 H 0.111 0.889 38 H 0.098 0.902 39 H 0.122 0.878 40 H 0.099 0.901 41 H 0.079 0.921 42 H 0.077 0.923 43 H 0.247 0.753 44 H 0.115 0.885 45 H 0.130 0.870 Dipole moment (debyes) X Y Z Total from point charges 4.111 1.541 2.657 5.132 hybrid contribution 0.201 -0.982 -1.200 1.563 sum 4.312 0.560 1.457 4.586 Atomic orbital electron populations 1.21018 0.89178 1.03537 1.03112 1.20049 0.97101 0.90016 0.87117 1.19752 0.93214 0.94466 1.09796 1.20714 0.96188 0.90098 1.13261 1.24822 0.90563 1.13794 0.87604 1.86606 1.55071 1.76606 1.17450 0.94103 0.79198 0.70039 0.88317 1.22346 0.83940 0.97228 1.00048 1.41611 1.10660 1.01655 1.62643 1.18775 0.89543 0.86823 0.99290 1.66507 1.40849 0.96478 1.19074 1.22882 0.89761 0.95208 0.91041 1.20439 0.95355 0.93264 1.15876 1.17953 0.86407 0.83774 0.75690 1.90748 1.14805 1.87469 1.51081 1.45618 1.11573 1.04971 1.74676 1.21659 0.93995 0.80346 1.04245 1.22625 0.83499 0.96328 0.91519 1.92846 1.53204 1.96592 1.75931 1.23727 1.00313 1.00301 0.93727 1.22369 0.99526 0.96117 0.94783 0.88254 1.22196 0.99464 0.96271 0.81426 1.86437 1.89475 1.43079 1.21594 1.23598 1.03040 0.94501 0.96051 0.91087 0.89770 0.90413 0.87062 0.76630 1.18428 1.23608 0.76205 0.72007 0.79603 0.75053 0.88880 0.90178 0.87849 0.90083 0.92142 0.92296 0.75286 0.88495 0.87034 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 -1.01 8.69 71.24 0.62 -0.40 16 2 C 0.07 0.57 5.98 -19.25 -0.12 0.46 16 3 C -0.17 -1.03 6.16 -20.19 -0.12 -1.16 16 4 C -0.20 -0.05 5.57 -18.64 -0.10 -0.16 16 5 C -0.06 0.03 2.07 71.24 0.15 0.18 16 6 O -0.55 -1.69 12.88 -148.98 -1.92 -3.60 16 7 Si 0.78 -3.99 30.83 68.60 2.11 -1.87 16 8 C 0.09 -0.48 10.44 82.97 0.87 0.38 16 9 N -0.56 1.51 6.04 -192.24 -1.16 0.35 16 10 C 0.29 1.45 8.42 134.02 1.13 2.58 16 11 N -0.52 -3.26 10.37 -191.73 -1.99 -5.25 16 12 C 0.18 0.74 10.67 85.20 0.91 1.64 16 13 C -0.24 -1.74 5.89 -19.99 -0.12 -1.85 16 14 C 0.57 4.49 7.72 86.73 0.67 5.16 16 15 O -0.56 -7.75 13.49 -3.94 -0.05 -7.80 16 16 N -0.72 -1.43 5.40 -466.13 -2.52 -3.95 16 17 C 0.12 0.07 5.27 86.38 0.45 0.53 16 18 C 0.08 -0.14 1.91 -10.27 -0.02 -0.16 16 19 F -0.21 -0.38 16.61 44.97 0.75 0.36 16 20 C -0.14 0.38 7.06 31.12 0.22 0.60 16 21 C -0.11 0.34 3.66 -10.27 -0.04 0.30 16 22 H 0.10 -0.14 7.72 -2.38 -0.02 -0.16 16 23 C 0.08 -0.32 6.88 71.98 0.50 0.18 16 24 O -0.60 0.12 13.66 -148.98 -2.03 -1.92 16 25 C -0.13 0.62 7.13 31.12 0.22 0.84 16 26 H 0.07 0.81 8.14 -2.39 -0.02 0.79 16 27 H 0.08 0.95 5.95 -2.39 -0.01 0.94 16 28 H 0.08 0.51 5.05 -2.39 -0.01 0.50 16 29 H 0.11 0.04 6.03 -2.39 -0.01 0.02 16 30 H 0.38 -1.24 8.70 -74.06 -0.64 -1.88 16 31 H -0.26 1.24 7.00 99.48 0.70 1.93 16 32 H -0.31 -1.26 7.11 99.48 0.71 -0.55 16 33 H 0.22 -2.96 6.28 -2.91 -0.02 -2.97 16 34 H 0.44 -3.59 8.96 -92.71 -0.83 -4.42 16 35 H 0.19 -0.49 6.43 -2.91 -0.02 -0.51 16 36 H 0.41 -0.76 6.10 -92.71 -0.57 -1.33 16 37 H 0.09 0.07 7.39 -2.39 -0.02 0.05 16 38 H 0.08 0.15 8.14 -2.39 -0.02 0.13 16 39 H 0.10 -0.36 7.90 -2.39 -0.02 -0.38 16 40 H 0.08 -0.13 8.10 -2.39 -0.02 -0.15 16 41 H 0.06 -0.35 8.14 -2.39 -0.02 -0.37 16 42 H 0.06 -0.34 7.84 -2.39 -0.02 -0.36 16 43 H 0.40 -3.33 9.12 -74.05 -0.68 -4.00 16 44 H 0.10 -0.57 8.10 -2.39 -0.02 -0.59 16 45 H 0.11 -0.68 8.10 -2.39 -0.02 -0.69 16 Total: 0.00 -25.38 369.09 -3.18 -28.56 By element: Atomic # 1 Polarization: -12.43 SS G_CDS: -1.58 Total: -14.01 kcal Atomic # 6 Polarization: 3.91 SS G_CDS: 5.21 Total: 9.12 kcal Atomic # 7 Polarization: -3.18 SS G_CDS: -5.67 Total: -8.85 kcal Atomic # 8 Polarization: -9.32 SS G_CDS: -4.01 Total: -13.32 kcal Atomic # 9 Polarization: -0.38 SS G_CDS: 0.75 Total: 0.36 kcal Atomic # 14 Polarization: -3.99 SS G_CDS: 2.11 Total: -1.87 kcal Total: -25.38 -3.18 -28.56 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16500644_12890568.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -35.634 kcal (2) G-P(sol) polarization free energy of solvation -25.385 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -61.019 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.179 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -28.564 kcal (6) G-S(sol) free energy of system = (1) + (5) -64.198 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.17 seconds