Wall clock time and date at job start Sun Mar 7 2021 09:02:03 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42908 * 1 3 3 Si 1.86297 * 109.47499 * 2 1 4 4 C 1.50695 * 109.46792 * 120.00415 * 2 1 3 5 5 C 1.38341 * 119.87102 * 245.02146 * 4 2 1 6 6 C 1.37992 * 120.12929 * 179.97438 * 5 4 2 7 7 C 1.39405 * 119.87202 * 359.97438 * 6 5 4 8 8 C 1.48277 * 120.12674 * 179.97438 * 7 6 5 9 9 C 1.39507 * 119.97543 * 359.73103 * 8 7 6 10 10 C 1.37662 * 120.02521 * 179.76434 * 9 8 7 11 11 C 1.39708 * 119.97474 * 0.50638 * 10 9 8 12 12 C 1.47722 * 120.02799 * 179.72295 * 11 10 9 13 13 O 1.21567 * 120.00091 * 180.02562 * 12 11 10 14 14 N 1.34774 * 119.99815 * 0.02562 * 12 11 10 15 15 C 1.46501 * 120.00397 * 179.97438 * 14 12 11 16 16 C 1.53001 * 109.47499 * 179.97438 * 15 14 12 17 17 F 1.39896 * 112.84735 * 316.19892 * 16 15 14 18 18 C 1.53777 * 113.61172 * 87.50180 * 16 15 14 19 19 C 1.53788 * 87.08005 * 89.11526 * 18 16 15 20 20 H 1.08997 * 113.61442 * 270.88444 * 19 18 16 21 21 C 1.52998 * 113.61205 * 139.97581 * 19 18 16 22 22 O 1.42905 * 109.46829 * 87.50518 * 21 19 18 23 23 C 1.53780 * 113.61328 * 184.99986 * 16 15 14 24 24 C 1.39710 * 119.95052 * 359.74152 * 11 10 9 25 25 C 1.37670 * 119.97599 * 0.02562 * 24 11 10 26 26 C 1.39398 * 119.74673 * 0.02562 * 7 6 5 27 27 C 1.38004 * 119.87137 * 0.02562 * 26 7 6 28 28 H 0.96696 * 113.99893 * 300.00545 * 1 2 3 29 29 H 1.09004 * 109.46503 * 239.99716 * 2 1 3 30 30 H 1.48502 * 109.99796 * 300.00190 * 3 2 1 31 31 H 1.48502 * 109.99779 * 61.31640 * 3 2 1 32 32 H 1.08000 * 119.93260 * 359.97438 * 5 4 2 33 33 H 1.08005 * 120.06441 * 180.27515 * 6 5 4 34 34 H 1.07997 * 119.98849 * 359.97438 * 9 8 7 35 35 H 1.07997 * 120.01472 * 180.25399 * 10 9 8 36 36 H 0.97003 * 119.99977 * 359.97438 * 14 12 11 37 37 H 1.08999 * 109.47312 * 300.00416 * 15 14 12 38 38 H 1.09005 * 109.46902 * 59.99556 * 15 14 12 39 39 H 1.08999 * 113.61170 * 203.66226 * 18 16 15 40 40 H 1.09001 * 113.61741 * 334.57238 * 18 16 15 41 41 H 1.09001 * 109.47304 * 207.50425 * 21 19 18 42 42 H 1.09000 * 109.47738 * 327.50641 * 21 19 18 43 43 H 0.96705 * 113.99845 * 179.97438 * 22 21 19 44 44 H 1.09003 * 113.61589 * 25.43529 * 23 16 15 45 45 H 1.08999 * 113.61286 * 156.33547 * 23 16 15 46 46 H 1.07996 * 120.01213 * 180.02562 * 24 11 10 47 47 H 1.07999 * 119.99014 * 179.97438 * 25 24 11 48 48 H 1.08001 * 120.06298 * 180.02562 * 26 7 6 49 49 H 1.07996 * 119.93921 * 180.02562 * 27 26 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0502 1.7564 0.0000 4 6 1.9313 -0.7105 1.2304 5 6 2.6386 -0.0092 2.1905 6 6 3.1005 -0.6544 3.3195 7 6 2.8527 -2.0154 3.4918 8 6 3.3469 -2.7144 4.7025 9 6 4.0661 -2.0107 5.6688 10 6 4.5213 -2.6576 6.7955 11 6 4.2718 -4.0216 6.9660 12 6 4.7650 -4.7182 8.1717 13 8 4.5480 -5.9052 8.3193 14 7 5.4554 -4.0378 9.1081 15 6 5.9440 -4.7284 10.3041 16 6 6.6902 -3.7354 11.1975 17 9 7.5484 -2.8966 10.4785 18 6 5.7773 -2.9872 12.1831 19 6 6.0260 -4.1419 13.1679 20 1 5.3129 -4.9604 13.0701 21 6 6.2116 -3.6833 14.6157 22 8 4.9364 -3.5956 15.2547 23 6 7.3500 -4.3862 12.4247 24 6 3.5559 -4.7264 5.9952 25 6 3.0976 -4.0765 4.8714 26 6 2.1395 -2.7169 2.5210 27 6 1.6834 -2.0614 1.3955 28 1 -0.3933 0.4418 0.7650 29 1 1.7923 -0.5139 -0.8900 30 1 1.5616 2.4678 -1.2085 31 1 1.5880 2.4585 1.2242 32 1 2.8295 1.0452 2.0562 33 1 3.6487 -0.1049 4.0705 34 1 4.2630 -0.9574 5.5346 35 1 5.0745 -2.1118 7.5455 36 1 5.6288 -3.0907 8.9901 37 1 5.1000 -5.1476 10.8520 38 1 6.6203 -5.5309 10.0094 39 1 6.1847 -2.0330 12.5172 40 1 4.7422 -2.9132 11.8495 41 1 6.8357 -4.4017 15.1472 42 1 6.6923 -2.7052 14.6283 43 1 4.9778 -3.3101 16.1777 44 1 7.5846 -5.4416 12.2861 45 1 8.1873 -3.8144 12.8248 46 1 3.3622 -5.7808 6.1261 47 1 2.5445 -4.6212 4.1206 48 1 1.9444 -3.7713 2.6494 49 1 1.1304 -2.6037 0.6429 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16500644_13158362.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:02:03 Heat of formation + Delta-G solvation = -84.476639 kcal Electronic energy + Delta-G solvation = -31828.720751 eV Core-core repulsion = 27216.286790 eV Total energy + Delta-G solvation = -4612.433961 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 372.157 amu Computer time = 1.27 seconds Orbital eigenvalues (eV) -48.78983 -41.45125 -40.77957 -40.18407 -39.19908 -37.65786 -37.33761 -35.62015 -34.08427 -32.66397 -31.73080 -31.14755 -29.90231 -27.63049 -27.20072 -26.55334 -24.71589 -24.31880 -22.99419 -22.61788 -22.30365 -21.28722 -20.49885 -19.29645 -18.61187 -18.38851 -17.86116 -17.72795 -17.12422 -16.91551 -16.77868 -16.61309 -16.30699 -16.03935 -15.98966 -15.75708 -15.60360 -15.45640 -15.16719 -15.03029 -14.99706 -14.66316 -14.53165 -14.38300 -14.19224 -14.02755 -13.88144 -13.57379 -13.51524 -13.17299 -12.93472 -12.78546 -12.65430 -12.47709 -12.25260 -12.07056 -11.98138 -11.66725 -11.57466 -11.47639 -11.03106 -10.97691 -10.78675 -10.61646 -10.23418 -10.11277 -10.03125 -9.12449 -5.00502 -0.71625 0.29462 0.32545 0.48032 1.23362 1.54427 1.82819 1.92237 1.92483 2.57460 2.83946 2.96792 3.00815 3.10082 3.11731 3.30535 3.32667 3.39749 3.52959 3.62131 3.71037 3.76309 3.80486 3.89556 3.97256 4.11144 4.16082 4.19575 4.22885 4.27157 4.27638 4.38607 4.43826 4.46995 4.47584 4.52638 4.57116 4.58612 4.62749 4.75024 4.82147 4.84009 4.87635 4.98266 5.07658 5.13917 5.16699 5.21561 5.25767 5.34312 5.43002 5.59512 5.74371 5.84917 6.34860 6.35037 6.56225 7.11744 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.529 6.529 2 C -0.077 4.077 3 Si 0.686 3.314 4 C -0.112 4.112 5 C -0.116 4.116 6 C -0.101 4.101 7 C -0.049 4.049 8 C -0.017 4.017 9 C -0.118 4.118 10 C -0.081 4.081 11 C -0.136 4.136 12 C 0.562 3.438 13 O -0.532 6.532 14 N -0.725 5.725 15 C 0.120 3.880 16 C 0.078 3.922 17 F -0.195 7.195 18 C -0.146 4.146 19 C -0.109 4.109 20 H 0.107 0.893 21 C 0.087 3.913 22 O -0.573 6.573 23 C -0.141 4.141 24 C -0.053 4.053 25 C -0.118 4.118 26 C -0.104 4.104 27 C -0.090 4.090 28 H 0.376 0.624 29 H 0.119 0.881 30 H -0.257 1.257 31 H -0.260 1.260 32 H 0.130 0.870 33 H 0.131 0.869 34 H 0.134 0.866 35 H 0.128 0.872 36 H 0.405 0.595 37 H 0.093 0.907 38 H 0.086 0.914 39 H 0.099 0.901 40 H 0.085 0.915 41 H 0.051 0.949 42 H 0.050 0.950 43 H 0.383 0.617 44 H 0.090 0.910 45 H 0.103 0.897 46 H 0.140 0.860 47 H 0.135 0.865 48 H 0.130 0.870 49 H 0.129 0.871 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.375 3.201 2.705 5.381 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.335 6.335 2 C -0.186 4.186 3 Si 0.588 3.412 4 C -0.112 4.112 5 C -0.134 4.134 6 C -0.118 4.118 7 C -0.049 4.049 8 C -0.017 4.017 9 C -0.136 4.136 10 C -0.099 4.099 11 C -0.139 4.139 12 C 0.350 3.650 13 O -0.410 6.410 14 N -0.378 5.378 15 C -0.004 4.004 16 C 0.060 3.940 17 F -0.176 7.176 18 C -0.184 4.184 19 C -0.127 4.127 20 H 0.125 0.875 21 C 0.009 3.991 22 O -0.379 6.379 23 C -0.179 4.179 24 C -0.072 4.072 25 C -0.136 4.136 26 C -0.122 4.122 27 C -0.108 4.108 28 H 0.224 0.776 29 H 0.137 0.863 30 H -0.182 1.182 31 H -0.185 1.185 32 H 0.147 0.853 33 H 0.149 0.851 34 H 0.152 0.848 35 H 0.146 0.854 36 H 0.241 0.759 37 H 0.111 0.889 38 H 0.104 0.896 39 H 0.117 0.883 40 H 0.104 0.896 41 H 0.070 0.930 42 H 0.068 0.932 43 H 0.230 0.770 44 H 0.108 0.892 45 H 0.121 0.879 46 H 0.158 0.842 47 H 0.153 0.847 48 H 0.148 0.852 49 H 0.147 0.853 Dipole moment (debyes) X Y Z Total from point charges 2.930 2.692 1.664 4.313 hybrid contribution -0.586 0.557 1.052 1.327 sum 2.343 3.249 2.716 4.840 Atomic orbital electron populations 1.86614 1.17609 1.79964 1.49326 1.25059 0.84036 1.11075 0.98472 0.94957 0.91640 0.74448 0.80200 1.20391 0.99221 0.94937 0.96665 1.21003 0.98533 0.99749 0.94095 1.21203 0.99468 0.93542 0.97623 1.18823 0.98751 0.93493 0.93799 1.18998 0.96112 0.93327 0.93248 1.21161 0.98449 1.00407 0.93547 1.21215 0.98025 0.93198 0.97498 1.19910 1.03533 0.94307 0.96192 1.18249 0.77619 0.86552 0.82611 1.90809 1.57147 1.14964 1.78035 1.45709 1.57045 1.13836 1.21238 1.21636 0.99089 0.94123 0.85523 1.22590 0.90699 0.90985 0.89750 1.92861 1.71676 1.72652 1.80362 1.23740 1.00805 0.98856 0.94975 1.22391 0.97976 0.99261 0.93088 0.87453 1.22108 0.85264 0.99524 0.92211 1.86485 1.29770 1.91547 1.30087 1.23605 0.97833 1.02985 0.93488 1.21224 0.93588 1.00675 0.91672 1.21247 1.00630 0.93637 0.98077 1.21340 0.97243 1.00207 0.93422 1.20987 0.98532 0.93720 0.97530 0.77622 0.86299 1.18174 1.18516 0.85251 0.85110 0.84807 0.85382 0.75907 0.88887 0.89630 0.88289 0.89650 0.93038 0.93218 0.77003 0.89169 0.87860 0.84192 0.84748 0.85217 0.85262 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.53 12.83 -35.23 -0.45 -0.98 16 2 C -0.08 0.04 2.80 36.00 0.10 0.15 16 3 Si 0.69 -0.89 29.87 -169.99 -5.08 -5.97 16 4 C -0.11 0.03 5.36 -104.55 -0.56 -0.53 16 5 C -0.12 0.10 8.65 -39.63 -0.34 -0.24 16 6 C -0.10 0.08 9.43 -39.24 -0.37 -0.29 16 7 C -0.05 -0.01 5.88 -104.90 -0.62 -0.62 16 8 C -0.02 0.00 5.88 -104.83 -0.62 -0.62 16 9 C -0.12 0.08 9.41 -39.32 -0.37 -0.29 16 10 C -0.08 0.05 9.52 -39.24 -0.37 -0.33 16 11 C -0.14 -0.20 5.88 -104.92 -0.62 -0.82 16 12 C 0.56 1.60 7.77 -12.39 -0.10 1.50 16 13 O -0.53 -3.34 16.33 5.31 0.09 -3.25 16 14 N -0.72 -0.26 5.40 -61.29 -0.33 -0.60 16 15 C 0.12 -0.02 5.26 -4.04 -0.02 -0.04 16 16 C 0.08 -0.09 1.91 -89.81 -0.17 -0.26 16 17 F -0.20 -0.14 16.61 2.25 0.04 -0.10 16 18 C -0.15 0.23 7.06 -25.92 -0.18 0.05 16 19 C -0.11 0.19 3.66 -89.80 -0.33 -0.14 16 20 H 0.11 -0.12 7.72 -51.93 -0.40 -0.52 16 21 C 0.09 -0.16 6.88 37.16 0.26 0.10 16 22 O -0.57 0.12 13.66 -35.23 -0.48 -0.36 16 23 C -0.14 0.33 7.12 -25.92 -0.18 0.14 16 24 C -0.05 -0.08 9.58 -39.24 -0.38 -0.45 16 25 C -0.12 -0.04 9.41 -39.32 -0.37 -0.41 16 26 C -0.10 0.01 9.43 -39.24 -0.37 -0.36 16 27 C -0.09 0.00 9.67 -39.63 -0.38 -0.39 16 28 H 0.38 -0.66 8.70 45.56 0.40 -0.26 16 29 H 0.12 -0.15 7.96 -51.93 -0.41 -0.56 16 30 H -0.26 -0.55 7.11 56.52 0.40 -0.15 16 31 H -0.26 -0.13 7.00 56.52 0.40 0.26 16 32 H 0.13 -0.32 4.82 -52.49 -0.25 -0.57 16 33 H 0.13 -0.36 6.19 -52.48 -0.33 -0.69 16 34 H 0.13 -0.39 6.19 -52.49 -0.32 -0.71 16 35 H 0.13 -0.38 6.39 -52.49 -0.34 -0.71 16 36 H 0.40 -0.58 6.05 -40.82 -0.25 -0.82 16 37 H 0.09 -0.02 7.39 -51.93 -0.38 -0.40 16 38 H 0.09 0.03 8.14 -51.93 -0.42 -0.40 16 39 H 0.10 -0.18 7.90 -51.93 -0.41 -0.59 16 40 H 0.08 -0.11 8.10 -51.93 -0.42 -0.53 16 41 H 0.05 -0.14 8.14 -51.93 -0.42 -0.56 16 42 H 0.05 -0.13 7.84 -51.93 -0.41 -0.54 16 43 H 0.38 -1.63 9.12 45.56 0.42 -1.22 16 44 H 0.09 -0.27 8.10 -51.93 -0.42 -0.69 16 45 H 0.10 -0.29 8.10 -51.93 -0.42 -0.71 16 46 H 0.14 0.21 7.64 -52.49 -0.40 -0.19 16 47 H 0.13 -0.20 6.19 -52.49 -0.32 -0.53 16 48 H 0.13 -0.21 6.19 -52.49 -0.33 -0.54 16 49 H 0.13 -0.07 8.06 -52.49 -0.42 -0.50 16 LS Contribution 404.28 15.07 6.09 6.09 Total: 0.00 -9.57 404.28 -11.59 -21.16 By element: Atomic # 1 Polarization: -6.66 SS G_CDS: -5.47 Total: -12.13 kcal Atomic # 6 Polarization: 2.13 SS G_CDS: -5.99 Total: -3.86 kcal Atomic # 7 Polarization: -0.26 SS G_CDS: -0.33 Total: -0.60 kcal Atomic # 8 Polarization: -3.75 SS G_CDS: -0.85 Total: -4.60 kcal Atomic # 9 Polarization: -0.14 SS G_CDS: 0.04 Total: -0.10 kcal Atomic # 14 Polarization: -0.89 SS G_CDS: -5.08 Total: -5.97 kcal Total LS contribution 6.09 Total: 6.09 kcal Total: -9.57 -11.59 -21.16 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16500644_13158362.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -63.319 kcal (2) G-P(sol) polarization free energy of solvation -9.567 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -72.886 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.591 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.158 kcal (6) G-S(sol) free energy of system = (1) + (5) -84.477 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.27 seconds