Wall clock time and date at job start Sun Mar 7 2021 09:02:02 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42908 * 1 3 3 Si 1.86297 * 109.47499 * 2 1 4 4 C 1.50695 * 109.46792 * 120.00415 * 2 1 3 5 5 C 1.38341 * 119.87102 * 245.02146 * 4 2 1 6 6 C 1.37992 * 120.12929 * 179.97438 * 5 4 2 7 7 C 1.39405 * 119.87202 * 359.97438 * 6 5 4 8 8 C 1.48277 * 120.12674 * 179.97438 * 7 6 5 9 9 C 1.39507 * 119.97543 * 359.73103 * 8 7 6 10 10 C 1.37662 * 120.02521 * 179.76434 * 9 8 7 11 11 C 1.39708 * 119.97474 * 0.50638 * 10 9 8 12 12 C 1.47722 * 120.02799 * 179.72295 * 11 10 9 13 13 O 1.21567 * 120.00091 * 180.02562 * 12 11 10 14 14 N 1.34774 * 119.99815 * 0.02562 * 12 11 10 15 15 C 1.46501 * 120.00397 * 179.97438 * 14 12 11 16 16 C 1.53001 * 109.47499 * 179.97438 * 15 14 12 17 17 F 1.39896 * 112.84735 * 316.19892 * 16 15 14 18 18 C 1.53777 * 113.61172 * 87.50180 * 16 15 14 19 19 C 1.53788 * 87.08005 * 89.11526 * 18 16 15 20 20 H 1.08997 * 113.61442 * 270.88444 * 19 18 16 21 21 C 1.52998 * 113.61205 * 139.97581 * 19 18 16 22 22 O 1.42905 * 109.46829 * 87.50518 * 21 19 18 23 23 C 1.53780 * 113.61328 * 184.99986 * 16 15 14 24 24 C 1.39710 * 119.95052 * 359.74152 * 11 10 9 25 25 C 1.37670 * 119.97599 * 0.02562 * 24 11 10 26 26 C 1.39398 * 119.74673 * 0.02562 * 7 6 5 27 27 C 1.38004 * 119.87137 * 0.02562 * 26 7 6 28 28 H 0.96696 * 113.99893 * 300.00545 * 1 2 3 29 29 H 1.09004 * 109.46503 * 239.99716 * 2 1 3 30 30 H 1.48502 * 109.99796 * 300.00190 * 3 2 1 31 31 H 1.48502 * 109.99779 * 61.31640 * 3 2 1 32 32 H 1.08000 * 119.93260 * 359.97438 * 5 4 2 33 33 H 1.08005 * 120.06441 * 180.27515 * 6 5 4 34 34 H 1.07997 * 119.98849 * 359.97438 * 9 8 7 35 35 H 1.07997 * 120.01472 * 180.25399 * 10 9 8 36 36 H 0.97003 * 119.99977 * 359.97438 * 14 12 11 37 37 H 1.08999 * 109.47312 * 300.00416 * 15 14 12 38 38 H 1.09005 * 109.46902 * 59.99556 * 15 14 12 39 39 H 1.08999 * 113.61170 * 203.66226 * 18 16 15 40 40 H 1.09001 * 113.61741 * 334.57238 * 18 16 15 41 41 H 1.09001 * 109.47304 * 207.50425 * 21 19 18 42 42 H 1.09000 * 109.47738 * 327.50641 * 21 19 18 43 43 H 0.96705 * 113.99845 * 179.97438 * 22 21 19 44 44 H 1.09003 * 113.61589 * 25.43529 * 23 16 15 45 45 H 1.08999 * 113.61286 * 156.33547 * 23 16 15 46 46 H 1.07996 * 120.01213 * 180.02562 * 24 11 10 47 47 H 1.07999 * 119.99014 * 179.97438 * 25 24 11 48 48 H 1.08001 * 120.06298 * 180.02562 * 26 7 6 49 49 H 1.07996 * 119.93921 * 180.02562 * 27 26 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0502 1.7564 0.0000 4 6 1.9313 -0.7105 1.2304 5 6 2.6386 -0.0092 2.1905 6 6 3.1005 -0.6544 3.3195 7 6 2.8527 -2.0154 3.4918 8 6 3.3469 -2.7144 4.7025 9 6 4.0661 -2.0107 5.6688 10 6 4.5213 -2.6576 6.7955 11 6 4.2718 -4.0216 6.9660 12 6 4.7650 -4.7182 8.1717 13 8 4.5480 -5.9052 8.3193 14 7 5.4554 -4.0378 9.1081 15 6 5.9440 -4.7284 10.3041 16 6 6.6902 -3.7354 11.1975 17 9 7.5484 -2.8966 10.4785 18 6 5.7773 -2.9872 12.1831 19 6 6.0260 -4.1419 13.1679 20 1 5.3129 -4.9604 13.0701 21 6 6.2116 -3.6833 14.6157 22 8 4.9364 -3.5956 15.2547 23 6 7.3500 -4.3862 12.4247 24 6 3.5559 -4.7264 5.9952 25 6 3.0976 -4.0765 4.8714 26 6 2.1395 -2.7169 2.5210 27 6 1.6834 -2.0614 1.3955 28 1 -0.3933 0.4418 0.7650 29 1 1.7923 -0.5139 -0.8900 30 1 1.5616 2.4678 -1.2085 31 1 1.5880 2.4585 1.2242 32 1 2.8295 1.0452 2.0562 33 1 3.6487 -0.1049 4.0705 34 1 4.2630 -0.9574 5.5346 35 1 5.0745 -2.1118 7.5455 36 1 5.6288 -3.0907 8.9901 37 1 5.1000 -5.1476 10.8520 38 1 6.6203 -5.5309 10.0094 39 1 6.1847 -2.0330 12.5172 40 1 4.7422 -2.9132 11.8495 41 1 6.8357 -4.4017 15.1472 42 1 6.6923 -2.7052 14.6283 43 1 4.9778 -3.3101 16.1777 44 1 7.5846 -5.4416 12.2861 45 1 8.1873 -3.8144 12.8248 46 1 3.3622 -5.7808 6.1261 47 1 2.5445 -4.6212 4.1206 48 1 1.9444 -3.7713 2.6494 49 1 1.1304 -2.6037 0.6429 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16500644_13158362.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:02:02 Heat of formation + Delta-G solvation = -83.992751 kcal Electronic energy + Delta-G solvation = -31828.699768 eV Core-core repulsion = 27216.286790 eV Total energy + Delta-G solvation = -4612.412978 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 372.157 amu Computer time = 1.37 seconds Orbital eigenvalues (eV) -48.77947 -41.50380 -40.76950 -40.09318 -39.23379 -37.65577 -37.25034 -35.74893 -34.06735 -32.61052 -31.68415 -31.13495 -29.84158 -27.58412 -27.05736 -26.50456 -24.66290 -24.31463 -22.90045 -22.56365 -22.32254 -21.33123 -20.41765 -19.27859 -18.60042 -18.26716 -17.83923 -17.75039 -17.12991 -16.87385 -16.70508 -16.60087 -16.29047 -16.12224 -15.98413 -15.71103 -15.56984 -15.40017 -15.14974 -14.96355 -14.90465 -14.67975 -14.51889 -14.36038 -14.17905 -13.99596 -13.83213 -13.57228 -13.42390 -13.17593 -12.83421 -12.78912 -12.60493 -12.37292 -12.14604 -12.06668 -11.95000 -11.57686 -11.52381 -11.37170 -11.19566 -10.84060 -10.80018 -10.59392 -10.34474 -10.09031 -9.95704 -9.09800 -4.92153 -0.71990 0.32465 0.40213 0.47831 1.30597 1.59110 1.71972 1.86853 1.96004 2.57703 2.97804 2.99868 3.07556 3.22022 3.24458 3.36995 3.44484 3.46455 3.59605 3.66296 3.75716 3.86329 3.90288 3.99986 4.04557 4.23060 4.24494 4.27787 4.33876 4.35652 4.36874 4.49687 4.53564 4.58400 4.63800 4.64986 4.66282 4.67192 4.71556 4.88733 4.89825 4.90384 4.98207 5.07880 5.10811 5.16676 5.19666 5.24843 5.31585 5.39565 5.49627 5.64370 5.76994 5.92770 6.28271 6.46728 6.87433 6.97916 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.549 6.549 2 C -0.086 4.086 3 Si 0.769 3.231 4 C -0.115 4.115 5 C -0.120 4.120 6 C -0.101 4.101 7 C -0.060 4.060 8 C -0.020 4.020 9 C -0.117 4.117 10 C -0.075 4.075 11 C -0.153 4.153 12 C 0.559 3.441 13 O -0.577 6.577 14 N -0.713 5.713 15 C 0.119 3.881 16 C 0.080 3.920 17 F -0.204 7.204 18 C -0.142 4.142 19 C -0.111 4.111 20 H 0.098 0.902 21 C 0.084 3.916 22 O -0.598 6.598 23 C -0.134 4.134 24 C -0.068 4.068 25 C -0.124 4.124 26 C -0.112 4.112 27 C -0.102 4.102 28 H 0.386 0.614 29 H 0.124 0.876 30 H -0.306 1.306 31 H -0.279 1.279 32 H 0.147 0.853 33 H 0.154 0.846 34 H 0.161 0.839 35 H 0.153 0.847 36 H 0.414 0.586 37 H 0.091 0.909 38 H 0.079 0.921 39 H 0.105 0.895 40 H 0.080 0.920 41 H 0.061 0.939 42 H 0.060 0.940 43 H 0.397 0.603 44 H 0.096 0.904 45 H 0.113 0.887 46 H 0.129 0.871 47 H 0.146 0.854 48 H 0.138 0.862 49 H 0.129 0.871 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.363 4.805 3.291 7.277 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.357 6.357 2 C -0.195 4.195 3 Si 0.674 3.326 4 C -0.115 4.115 5 C -0.138 4.138 6 C -0.119 4.119 7 C -0.060 4.060 8 C -0.021 4.021 9 C -0.135 4.135 10 C -0.093 4.093 11 C -0.156 4.156 12 C 0.348 3.652 13 O -0.458 6.458 14 N -0.366 5.366 15 C -0.005 4.005 16 C 0.061 3.939 17 F -0.185 7.185 18 C -0.180 4.180 19 C -0.129 4.129 20 H 0.116 0.884 21 C 0.007 3.993 22 O -0.406 6.406 23 C -0.172 4.172 24 C -0.087 4.087 25 C -0.141 4.141 26 C -0.130 4.130 27 C -0.120 4.120 28 H 0.235 0.765 29 H 0.141 0.859 30 H -0.235 1.235 31 H -0.205 1.205 32 H 0.164 0.836 33 H 0.171 0.829 34 H 0.178 0.822 35 H 0.170 0.830 36 H 0.252 0.748 37 H 0.109 0.891 38 H 0.097 0.903 39 H 0.123 0.877 40 H 0.098 0.902 41 H 0.079 0.921 42 H 0.078 0.922 43 H 0.247 0.753 44 H 0.115 0.885 45 H 0.131 0.869 46 H 0.147 0.853 47 H 0.163 0.837 48 H 0.156 0.844 49 H 0.147 0.853 Dipole moment (debyes) X Y Z Total from point charges 3.940 4.310 2.287 6.271 hybrid contribution -0.940 0.096 0.835 1.261 sum 3.000 4.405 3.122 6.177 Atomic orbital electron populations 1.86582 1.18583 1.80402 1.50180 1.25282 0.83404 1.12022 0.98762 0.94035 0.90268 0.71914 0.76337 1.20460 0.99317 0.94878 0.96877 1.21203 0.98191 1.00526 0.93846 1.21492 0.99096 0.93254 0.98052 1.18928 0.99201 0.94091 0.93791 1.19157 0.96056 0.93244 0.93599 1.21483 0.97538 1.01617 0.92856 1.21456 0.97526 0.92254 0.98110 1.19937 1.04511 0.95361 0.95830 1.18539 0.77335 0.86132 0.83209 1.90777 1.59089 1.16814 1.79070 1.45651 1.55950 1.14224 1.20808 1.21672 0.99017 0.94411 0.85448 1.22598 0.90814 0.90834 0.89634 1.92842 1.72003 1.72944 1.80672 1.23731 1.00396 0.99151 0.94731 1.22376 0.98117 0.98908 0.93538 0.88410 1.22196 0.84882 1.00366 0.91892 1.86440 1.30865 1.91786 1.31540 1.23604 0.97752 1.03475 0.92352 1.21246 0.94501 1.00462 0.92505 1.21382 1.00715 0.94107 0.97940 1.21508 0.97235 1.00816 0.93447 1.21086 0.99025 0.94141 0.97796 0.76492 0.85871 1.23489 1.20534 0.83627 0.82858 0.82166 0.82964 0.74753 0.89105 0.90257 0.87667 0.90154 0.92125 0.92171 0.75270 0.88534 0.86878 0.85310 0.83651 0.84431 0.85281 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -1.22 12.83 -148.98 -1.91 -3.13 16 2 C -0.09 0.12 2.80 71.23 0.20 0.32 16 3 Si 0.77 -2.31 29.87 68.60 2.05 -0.26 16 4 C -0.11 0.12 5.36 -19.82 -0.11 0.02 16 5 C -0.12 0.38 8.65 22.24 0.19 0.57 16 6 C -0.10 0.32 9.43 22.49 0.21 0.53 16 7 C -0.06 0.03 5.88 -20.05 -0.12 -0.09 16 8 C -0.02 0.00 5.88 -20.00 -0.12 -0.12 16 9 C -0.12 0.34 9.41 22.44 0.21 0.55 16 10 C -0.08 0.15 9.52 22.49 0.21 0.36 16 11 C -0.15 -0.58 5.88 -20.06 -0.12 -0.70 16 12 C 0.56 3.96 7.77 86.75 0.67 4.64 16 13 O -0.58 -8.63 16.33 -3.93 -0.06 -8.69 16 14 N -0.71 -0.93 5.40 -466.09 -2.52 -3.44 16 15 C 0.12 0.05 5.26 86.38 0.45 0.51 16 16 C 0.08 -0.20 1.91 -10.27 -0.02 -0.21 16 17 F -0.20 -0.17 16.61 44.97 0.75 0.58 16 18 C -0.14 0.49 7.06 31.12 0.22 0.71 16 19 C -0.11 0.39 3.66 -10.27 -0.04 0.35 16 20 H 0.10 -0.15 7.72 -2.39 -0.02 -0.17 16 21 C 0.08 -0.36 6.88 71.98 0.50 0.14 16 22 O -0.60 0.36 13.66 -148.98 -2.04 -1.68 16 23 C -0.13 0.69 7.12 31.12 0.22 0.91 16 24 C -0.07 -0.30 9.58 22.49 0.22 -0.09 16 25 C -0.12 -0.16 9.41 22.44 0.21 0.05 16 26 C -0.11 0.02 9.43 22.49 0.21 0.23 16 27 C -0.10 -0.02 9.67 22.24 0.21 0.19 16 28 H 0.39 -1.29 8.70 -74.06 -0.64 -1.93 16 29 H 0.12 -0.32 7.96 -2.39 -0.02 -0.34 16 30 H -0.31 -1.63 7.11 99.48 0.71 -0.93 16 31 H -0.28 -0.02 7.00 99.48 0.70 0.68 16 32 H 0.15 -1.00 4.82 -2.91 -0.01 -1.02 16 33 H 0.15 -1.29 6.19 -2.91 -0.02 -1.30 16 34 H 0.16 -1.39 6.19 -2.91 -0.02 -1.41 16 35 H 0.15 -1.16 6.39 -2.91 -0.02 -1.18 16 36 H 0.41 -1.31 6.05 -92.71 -0.56 -1.87 16 37 H 0.09 0.09 7.39 -2.39 -0.02 0.07 16 38 H 0.08 0.15 8.14 -2.38 -0.02 0.13 16 39 H 0.10 -0.47 7.90 -2.39 -0.02 -0.49 16 40 H 0.08 -0.19 8.10 -2.39 -0.02 -0.21 16 41 H 0.06 -0.38 8.14 -2.39 -0.02 -0.40 16 42 H 0.06 -0.39 7.84 -2.39 -0.02 -0.41 16 43 H 0.40 -3.48 9.12 -74.05 -0.68 -4.16 16 44 H 0.10 -0.61 8.10 -2.39 -0.02 -0.63 16 45 H 0.11 -0.77 8.10 -2.39 -0.02 -0.79 16 46 H 0.13 0.75 7.64 -2.91 -0.02 0.73 16 47 H 0.15 -0.31 6.19 -2.91 -0.02 -0.32 16 48 H 0.14 -0.39 6.19 -2.91 -0.02 -0.41 16 49 H 0.13 -0.06 8.06 -2.91 -0.02 -0.09 16 Total: 0.00 -23.08 404.28 -1.12 -24.20 By element: Atomic # 1 Polarization: -15.62 SS G_CDS: -0.82 Total: -16.44 kcal Atomic # 6 Polarization: 5.43 SS G_CDS: 3.43 Total: 8.86 kcal Atomic # 7 Polarization: -0.93 SS G_CDS: -2.52 Total: -3.44 kcal Atomic # 8 Polarization: -9.49 SS G_CDS: -4.01 Total: -13.50 kcal Atomic # 9 Polarization: -0.17 SS G_CDS: 0.75 Total: 0.58 kcal Atomic # 14 Polarization: -2.31 SS G_CDS: 2.05 Total: -0.26 kcal Total: -23.08 -1.12 -24.20 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16500644_13158362.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -59.793 kcal (2) G-P(sol) polarization free energy of solvation -23.084 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -82.877 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.116 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.200 kcal (6) G-S(sol) free energy of system = (1) + (5) -83.993 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.37 seconds