Wall clock time and date at job start Sun Mar 7 2021 09:02:07 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86302 * 109.47130 * 2 1 4 4 C 1.50695 * 109.47468 * 239.99345 * 2 1 3 5 5 C 1.38899 * 119.67209 * 119.99905 * 4 2 1 6 6 C 1.36474 * 120.61181 * 179.72090 * 5 4 2 7 7 C 1.40061 * 119.83221 * 0.28434 * 6 5 4 8 8 C 1.41591 * 133.38361 * 179.97438 * 7 6 5 9 9 C 1.35857 * 107.73202 * 179.97438 * 8 7 6 10 10 C 1.47060 * 125.43072 * 180.02562 * 9 8 7 11 11 O 1.21650 * 119.99592 * 359.97438 * 10 9 8 12 12 N 1.34773 * 120.00359 * 179.97438 * 10 9 8 13 13 C 1.46506 * 120.00235 * 179.97438 * 12 10 9 14 14 C 1.52998 * 109.47224 * 180.02562 * 13 12 10 15 15 F 1.39897 * 112.85042 * 50.33280 * 14 13 12 16 16 C 1.53778 * 113.61476 * 181.53054 * 14 13 12 17 17 C 1.53781 * 87.08150 * 139.98295 * 16 14 13 18 18 H 1.09008 * 113.61062 * 220.02058 * 17 16 14 19 19 C 1.52995 * 113.61788 * 89.11592 * 17 16 14 20 20 O 1.42897 * 109.47060 * 174.99842 * 19 17 16 21 21 C 1.53783 * 113.61525 * 279.13871 * 14 13 12 22 22 N 1.38148 * 109.14885 * 359.97438 * 9 8 7 23 23 C 1.37492 * 108.78970 * 0.02562 * 22 9 8 24 24 C 1.37710 * 119.67811 * 300.28640 * 4 2 1 25 25 H 0.96702 * 114.00280 * 300.00646 * 1 2 3 26 26 H 1.09009 * 109.46679 * 119.99306 * 2 1 3 27 27 H 1.48503 * 109.99619 * 299.99342 * 3 2 1 28 28 H 1.48491 * 110.00253 * 61.31066 * 3 2 1 29 29 H 1.08002 * 119.69708 * 0.02562 * 5 4 2 30 30 H 1.08001 * 120.08857 * 180.25235 * 6 5 4 31 31 H 1.08005 * 126.13395 * 359.97438 * 8 7 6 32 32 H 0.96998 * 120.00069 * 0.02562 * 12 10 9 33 33 H 1.09001 * 109.46738 * 300.00135 * 13 12 10 34 34 H 1.09000 * 109.46946 * 60.00167 * 13 12 10 35 35 H 1.09005 * 113.61406 * 254.52891 * 16 14 13 36 36 H 1.08997 * 113.61497 * 25.43207 * 16 14 13 37 37 H 1.09001 * 109.47161 * 295.00127 * 19 17 16 38 38 H 1.09003 * 109.47187 * 55.00197 * 19 17 16 39 39 H 0.96704 * 113.99562 * 180.02562 * 20 19 17 40 40 H 1.09004 * 113.61184 * 334.56364 * 21 14 13 41 41 H 1.08997 * 113.61730 * 105.46844 * 21 14 13 42 42 H 0.96995 * 125.61060 * 180.02562 * 22 9 8 43 43 H 1.07999 * 120.09609 * 359.96546 * 24 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7105 -1.2303 5 6 2.7295 -0.0290 -2.1402 6 6 3.1997 -0.6554 -3.2578 7 6 2.8713 -1.9960 -3.4954 8 6 3.1899 -2.9064 -4.5320 9 6 2.5907 -4.0906 -4.2413 10 6 2.6672 -5.3087 -5.0617 11 8 3.3077 -5.3063 -6.0959 12 7 2.0278 -6.4278 -4.6677 13 6 2.1036 -7.6412 -5.4852 14 6 1.2961 -8.7567 -4.8184 15 9 0.0026 -8.3557 -4.4676 16 6 1.3418 -10.0909 -5.5817 17 6 1.4443 -10.7811 -4.2113 18 1 2.1392 -11.6208 -4.1963 19 6 0.0867 -11.1205 -3.5929 20 8 0.2845 -11.8582 -2.3852 21 6 2.0499 -9.4682 -3.6824 22 7 1.8990 -3.9685 -3.0517 23 6 2.0582 -2.6883 -2.5763 24 6 1.5899 -2.0273 -1.4445 25 1 -0.3934 0.4418 0.7650 26 1 1.7923 -0.5138 0.8901 27 1 1.5616 2.4678 -1.2086 28 1 1.5878 2.4586 1.2240 29 1 2.9845 1.0047 -1.9591 30 1 3.8230 -0.1185 -3.9576 31 1 3.7998 -2.6970 -5.3984 32 1 1.5168 -6.4297 -3.8432 33 1 1.6943 -7.4386 -6.4749 34 1 3.1442 -7.9517 -5.5789 35 1 0.4204 -10.3190 -6.1177 36 1 2.2323 -10.2107 -6.1986 37 1 -0.4524 -10.1992 -3.3718 38 1 -0.4924 -11.7208 -4.2946 39 1 -0.5359 -12.1082 -1.9382 40 1 3.1344 -9.4175 -3.7792 41 1 1.6995 -9.1944 -2.6873 42 1 1.3855 -4.6705 -2.6224 43 1 0.9654 -2.5474 -0.7332 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16500644_13158378.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:02:07 Heat of formation + Delta-G solvation = -72.649294 kcal Electronic energy + Delta-G solvation = -28036.865385 eV Core-core repulsion = 23771.508285 eV Total energy + Delta-G solvation = -4265.357100 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 335.137 amu Computer time = 0.96 seconds Orbital eigenvalues (eV) -49.06408 -42.65136 -40.65289 -39.91041 -38.86372 -37.31188 -37.07581 -35.77720 -33.29642 -31.53770 -30.42398 -30.21388 -27.60307 -27.26143 -26.32181 -24.25684 -23.18728 -22.82062 -21.87997 -21.21874 -20.33528 -19.71862 -18.59949 -18.52506 -17.98549 -17.67934 -17.26495 -16.97292 -16.90327 -16.45332 -16.30298 -16.01467 -15.71510 -15.55564 -15.26762 -15.18043 -15.01187 -14.75496 -14.60337 -14.28282 -14.21144 -13.85724 -13.81726 -13.64236 -13.46469 -13.39473 -12.69642 -12.62880 -12.31380 -12.11125 -11.96900 -11.76657 -11.65320 -11.49822 -11.27350 -10.92703 -10.91317 -10.49690 -10.39035 -9.28129 -8.78221 -4.94483 -0.30913 0.56555 1.01302 1.28307 1.60859 1.72649 1.86172 1.98274 2.25641 2.76675 2.79381 2.90788 2.99482 3.06612 3.28968 3.32259 3.56831 3.63768 3.70263 3.85162 4.04378 4.05179 4.21356 4.21613 4.28042 4.32339 4.34339 4.39443 4.40576 4.43703 4.49732 4.51321 4.62287 4.65513 4.71380 4.88133 4.92990 4.99274 5.02431 5.11287 5.36171 5.43037 5.57902 5.64392 5.98700 6.15712 6.32869 6.41202 6.55681 6.93147 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.537 6.537 2 C -0.077 4.077 3 Si 0.687 3.313 4 C -0.041 4.041 5 C -0.143 4.143 6 C -0.050 4.050 7 C -0.117 4.117 8 C -0.097 4.097 9 C 0.011 3.989 10 C 0.587 3.413 11 O -0.516 6.516 12 N -0.727 5.727 13 C 0.113 3.887 14 C 0.076 3.924 15 F -0.184 7.184 16 C -0.140 4.140 17 C -0.111 4.111 18 H 0.097 0.903 19 C 0.085 3.915 20 O -0.573 6.573 21 C -0.147 4.147 22 N -0.579 5.579 23 C 0.117 3.883 24 C -0.103 4.103 25 H 0.380 0.620 26 H 0.077 0.923 27 H -0.254 1.254 28 H -0.263 1.263 29 H 0.130 0.870 30 H 0.134 0.866 31 H 0.159 0.841 32 H 0.399 0.601 33 H 0.085 0.915 34 H 0.095 0.905 35 H 0.089 0.911 36 H 0.112 0.888 37 H 0.057 0.943 38 H 0.051 0.949 39 H 0.383 0.617 40 H 0.105 0.895 41 H 0.085 0.915 42 H 0.417 0.583 43 H 0.125 0.875 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.424 -1.797 3.182 3.679 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.344 6.344 2 C -0.186 4.186 3 Si 0.588 3.412 4 C -0.043 4.043 5 C -0.161 4.161 6 C -0.069 4.069 7 C -0.122 4.122 8 C -0.124 4.124 9 C -0.098 4.098 10 C 0.374 3.626 11 O -0.391 6.391 12 N -0.379 5.379 13 C -0.010 4.010 14 C 0.057 3.943 15 F -0.165 7.165 16 C -0.178 4.178 17 C -0.129 4.129 18 H 0.116 0.884 19 C 0.007 3.993 20 O -0.379 6.379 21 C -0.185 4.185 22 N -0.183 5.183 23 C 0.007 3.993 24 C -0.124 4.124 25 H 0.228 0.772 26 H 0.095 0.905 27 H -0.178 1.178 28 H -0.188 1.188 29 H 0.148 0.852 30 H 0.151 0.849 31 H 0.177 0.823 32 H 0.234 0.766 33 H 0.104 0.896 34 H 0.113 0.887 35 H 0.107 0.893 36 H 0.130 0.870 37 H 0.075 0.925 38 H 0.069 0.931 39 H 0.231 0.769 40 H 0.124 0.876 41 H 0.103 0.897 42 H 0.255 0.745 43 H 0.143 0.857 Dipole moment (debyes) X Y Z Total from point charges 1.303 -1.355 1.698 2.533 hybrid contribution -2.513 -0.647 1.353 2.926 sum -1.209 -2.002 3.051 3.844 Atomic orbital electron populations 1.86595 1.17780 1.80209 1.49803 1.24829 0.84487 1.11173 0.98120 0.94917 0.91726 0.74347 0.80226 1.18932 0.97329 0.92906 0.95111 1.20418 1.00895 0.99724 0.95097 1.20347 0.97893 0.92009 0.96606 1.18216 1.02725 0.94915 0.96334 1.20968 1.01468 0.90270 0.99653 1.20005 1.03578 0.96444 0.89740 1.17167 0.79247 0.81478 0.84686 1.90889 1.41260 1.83532 1.23409 1.45701 1.53611 1.11459 1.27161 1.21868 1.01263 0.82760 0.95144 1.22258 0.79550 0.94090 0.98415 1.92850 1.38929 1.91771 1.92929 1.23557 1.05179 0.92231 0.96840 1.22289 0.97547 0.98190 0.94876 0.88420 1.22066 0.95399 0.95475 0.86366 1.86448 1.36309 1.76221 1.38920 1.23703 1.01239 0.95021 0.98488 1.41886 1.45268 1.11106 1.20085 1.18282 0.99952 0.84568 0.96509 1.19825 1.02144 0.94325 0.96086 0.77224 0.90483 1.17840 1.18801 0.85250 0.84854 0.82312 0.76641 0.89648 0.88702 0.89259 0.87002 0.92456 0.93074 0.76942 0.87646 0.89654 0.74506 0.85662 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.52 12.73 -35.23 -0.45 -0.96 16 2 C -0.08 0.02 2.80 36.00 0.10 0.12 16 3 Si 0.69 -0.70 29.75 -169.99 -5.06 -5.76 16 4 C -0.04 -0.05 5.43 -104.57 -0.57 -0.62 16 5 C -0.14 -0.09 8.59 -39.97 -0.34 -0.44 16 6 C -0.05 -0.05 10.06 -39.53 -0.40 -0.44 16 7 C -0.12 -0.26 6.16 -106.93 -0.66 -0.92 16 8 C -0.10 -0.23 10.53 -39.16 -0.41 -0.64 16 9 C 0.01 0.02 6.96 -82.29 -0.57 -0.55 16 10 C 0.59 1.32 7.80 -12.68 -0.10 1.22 16 11 O -0.52 -2.87 16.84 5.23 0.09 -2.78 16 12 N -0.73 0.41 5.47 -61.50 -0.34 0.07 16 13 C 0.11 -0.14 5.35 -4.04 -0.02 -0.16 16 14 C 0.08 -0.14 1.63 -89.81 -0.15 -0.29 16 15 F -0.18 0.01 15.08 2.25 0.03 0.05 16 16 C -0.14 0.39 7.13 -25.92 -0.18 0.20 16 17 C -0.11 0.17 4.20 -89.72 -0.38 -0.20 16 18 H 0.10 -0.11 8.14 -51.92 -0.42 -0.54 16 19 C 0.08 -0.08 6.65 37.15 0.25 0.17 16 20 O -0.57 -0.12 13.66 -35.23 -0.48 -0.60 16 21 C -0.15 0.31 7.08 -25.83 -0.18 0.13 16 22 N -0.58 -0.07 6.07 -7.35 -0.04 -0.12 16 23 C 0.12 0.21 7.25 -83.97 -0.61 -0.40 16 24 C -0.10 -0.15 9.61 -39.42 -0.38 -0.53 16 25 H 0.38 -1.14 8.74 45.56 0.40 -0.74 16 26 H 0.08 -0.16 7.96 -51.92 -0.41 -0.57 16 27 H -0.25 -0.56 7.11 56.52 0.40 -0.16 16 28 H -0.26 -0.26 7.11 56.52 0.40 0.14 16 29 H 0.13 -0.17 4.82 -52.49 -0.25 -0.43 16 30 H 0.13 -0.17 8.06 -52.49 -0.42 -0.60 16 31 H 0.16 0.23 8.06 -52.48 -0.42 -0.19 16 32 H 0.40 -0.95 7.29 -40.82 -0.30 -1.25 16 33 H 0.09 -0.04 8.14 -51.93 -0.42 -0.46 16 34 H 0.09 -0.16 7.98 -51.93 -0.41 -0.58 16 35 H 0.09 -0.24 8.10 -51.93 -0.42 -0.66 16 36 H 0.11 -0.46 8.10 -51.93 -0.42 -0.89 16 37 H 0.06 -0.05 6.31 -51.93 -0.33 -0.38 16 38 H 0.05 -0.09 8.14 -51.93 -0.42 -0.51 16 39 H 0.38 -1.46 9.12 45.56 0.42 -1.04 16 40 H 0.11 -0.32 7.99 -51.93 -0.41 -0.73 16 41 H 0.08 -0.13 8.10 -51.93 -0.42 -0.55 16 42 H 0.42 -1.13 8.12 -40.82 -0.33 -1.46 16 43 H 0.13 0.04 8.06 -52.49 -0.42 -0.38 16 LS Contribution 362.28 15.07 5.46 5.46 Total: 0.00 -9.94 362.28 -10.03 -19.96 By element: Atomic # 1 Polarization: -7.33 SS G_CDS: -4.63 Total: -11.96 kcal Atomic # 6 Polarization: 1.25 SS G_CDS: -4.60 Total: -3.36 kcal Atomic # 7 Polarization: 0.34 SS G_CDS: -0.38 Total: -0.05 kcal Atomic # 8 Polarization: -3.51 SS G_CDS: -0.84 Total: -4.35 kcal Atomic # 9 Polarization: 0.01 SS G_CDS: 0.03 Total: 0.05 kcal Atomic # 14 Polarization: -0.70 SS G_CDS: -5.06 Total: -5.76 kcal Total LS contribution 5.46 Total: 5.46 kcal Total: -9.94 -10.03 -19.96 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16500644_13158378.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -52.684 kcal (2) G-P(sol) polarization free energy of solvation -9.939 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -62.624 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.026 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.965 kcal (6) G-S(sol) free energy of system = (1) + (5) -72.649 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.96 seconds