Wall clock time and date at job start Sun Mar 7 2021 09:02:15 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42907 * 1 3 3 Si 1.86300 * 109.46665 * 2 1 4 4 C 1.50696 * 109.47144 * 120.00000 * 2 1 3 5 5 C 1.34704 * 125.66722 * 65.00012 * 4 2 1 6 6 C 1.40969 * 107.03369 * 179.97438 * 5 4 2 7 7 C 1.35940 * 106.73560 * 0.02562 * 6 5 4 8 8 C 1.47821 * 125.92368 * 180.02562 * 7 6 5 9 9 C 1.39796 * 120.00383 * 359.97263 * 8 7 6 10 10 C 1.37810 * 120.24871 * 180.02562 * 9 8 7 11 11 C 1.38784 * 120.24060 * 359.97438 * 10 9 8 12 12 O 1.35651 * 119.99903 * 179.97438 * 11 10 9 13 13 C 1.40245 * 119.99428 * 0.02562 * 11 10 9 14 14 C 1.47566 * 120.11668 * 180.02562 * 13 11 10 15 15 O 1.21588 * 120.00388 * 359.97438 * 14 13 11 16 16 N 1.34779 * 119.99849 * 180.02562 * 14 13 11 17 17 C 1.46506 * 120.00145 * 180.02562 * 16 14 13 18 18 C 1.52999 * 109.46838 * 179.97438 * 17 16 14 19 19 F 1.39895 * 112.85067 * 314.65898 * 18 17 16 20 20 C 1.53781 * 113.61474 * 85.86338 * 18 17 16 21 21 C 1.54048 * 86.98906 * 89.15803 * 20 18 17 22 22 H 1.09004 * 113.69008 * 270.87258 * 21 20 18 23 23 C 1.52994 * 113.62104 * 139.97401 * 21 20 18 24 24 O 1.42904 * 109.46956 * 87.50633 * 23 21 20 25 25 C 1.53782 * 87.07878 * 25.43020 * 21 20 18 26 26 C 1.39215 * 119.99654 * 179.97438 * 8 7 6 27 27 O 1.34344 * 125.66559 * 245.31299 * 4 2 1 28 28 H 0.96696 * 114.00025 * 300.00002 * 1 2 3 29 29 H 1.08993 * 109.47114 * 240.00054 * 2 1 3 30 30 H 1.48504 * 109.99826 * 178.68058 * 3 2 1 31 31 H 1.48502 * 110.00389 * 299.99765 * 3 2 1 32 32 H 1.08008 * 126.48154 * 359.97438 * 5 4 2 33 33 H 1.07996 * 126.63343 * 179.97438 * 6 5 4 34 34 H 1.08009 * 119.87952 * 0.02562 * 9 8 7 35 35 H 1.07997 * 119.88201 * 179.97438 * 10 9 8 36 36 H 0.96701 * 113.99858 * 90.00707 * 12 11 10 37 37 H 0.97002 * 119.99912 * 359.97438 * 16 14 13 38 38 H 1.08998 * 109.46458 * 299.99385 * 17 16 14 39 39 H 1.08996 * 109.47219 * 59.98894 * 17 16 14 40 40 H 1.09002 * 113.60779 * 203.65980 * 20 18 17 41 41 H 1.08997 * 113.61317 * 334.56201 * 20 18 17 42 42 H 1.09002 * 109.47618 * 207.50142 * 23 21 20 43 43 H 1.08998 * 109.47543 * 327.50934 * 23 21 20 44 44 H 0.96698 * 114.00469 * 180.02562 * 24 23 21 45 45 H 1.08999 * 113.61814 * 220.02891 * 25 21 20 46 46 H 1.08995 * 113.69417 * 89.13092 * 25 21 20 47 47 H 1.07997 * 120.12125 * 359.69604 * 26 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9314 -0.7104 1.2304 5 6 1.7572 -2.0167 1.5093 6 6 2.3824 -2.2612 2.7489 7 6 2.9086 -1.0779 3.1621 8 6 3.6598 -0.8532 4.4153 9 6 3.8817 -1.9150 5.2972 10 6 4.5810 -1.7111 6.4671 11 6 5.0705 -0.4503 6.7781 12 8 5.7577 -0.2550 7.9313 13 6 4.8537 0.6221 5.9007 14 6 5.3735 1.9637 6.2284 15 8 5.9906 2.1411 7.2610 16 7 5.1634 2.9927 5.3837 17 6 5.6799 4.3246 5.7088 18 6 5.3069 5.3025 4.5928 19 9 5.5404 4.7833 3.3150 20 6 3.9102 5.9239 4.7597 21 6 4.5919 7.0360 5.5792 22 1 4.6626 6.8145 6.6442 23 6 4.0352 8.4332 5.2986 24 8 2.9160 8.6803 6.1522 25 6 5.8767 6.7163 4.7969 26 6 4.1463 0.4157 4.7172 27 8 2.6223 -0.1448 2.2342 28 1 -0.3933 0.4417 0.7650 29 1 1.7924 -0.5138 -0.8899 30 1 3.5346 1.7704 0.0321 31 1 1.5614 2.4680 -1.2085 32 1 1.2368 -2.7398 0.8987 33 1 2.4329 -3.2059 3.2699 34 1 3.5037 -2.8988 5.0609 35 1 4.7486 -2.5354 7.1443 36 1 6.7118 -0.3883 7.8479 37 1 4.6708 2.8513 4.5601 38 1 5.2453 4.6631 6.6493 39 1 6.7647 4.2801 5.8050 40 1 3.4742 6.2755 3.8245 41 1 3.2250 5.3080 5.3421 42 1 4.8085 9.1775 5.4890 43 1 3.7189 8.4960 4.2575 44 1 2.5114 9.5497 6.0285 45 1 6.7780 6.7396 5.4093 46 1 5.9788 7.2836 3.8718 47 1 3.9802 1.2363 4.0349 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16500644_13259648.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:02:15 Heat of formation + Delta-G solvation = -129.491254 kcal Electronic energy + Delta-G solvation = -34569.783750 eV Core-core repulsion = 29601.797184 eV Total energy + Delta-G solvation = -4967.986566 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 378.140 amu Computer time = 1.31 seconds Orbital eigenvalues (eV) -48.76651 -43.72086 -41.53842 -40.36671 -39.47610 -38.15199 -37.80341 -37.30680 -35.49743 -34.23077 -32.85589 -32.59394 -30.16749 -29.89874 -27.39475 -27.12408 -26.42540 -25.03539 -23.58381 -22.98413 -22.80587 -21.76171 -21.22954 -20.49259 -19.60636 -19.14761 -18.41100 -18.35286 -17.79911 -17.67017 -17.44454 -17.07509 -16.83150 -16.68364 -16.51022 -16.26503 -15.91059 -15.84061 -15.76125 -15.64452 -15.35181 -14.99188 -14.62350 -14.44829 -14.32556 -14.24985 -14.00236 -13.91597 -13.89723 -13.61609 -13.40569 -13.25330 -13.15407 -12.90547 -12.82779 -12.45639 -12.23083 -12.13567 -11.86312 -11.63942 -11.45856 -11.07489 -10.98576 -10.83327 -10.70254 -10.47795 -10.35909 -10.14764 -8.93041 -5.10330 -0.58442 -0.24639 0.75468 1.09494 1.40944 1.47834 1.73513 1.88498 1.89955 1.91770 2.60689 2.86035 3.02651 3.06705 3.11212 3.13279 3.18494 3.28587 3.34039 3.47241 3.57101 3.77677 3.85320 3.95475 3.96578 4.12885 4.13476 4.21391 4.25290 4.28596 4.34245 4.40236 4.45201 4.48921 4.54055 4.57191 4.59219 4.62828 4.74458 4.77325 4.80701 4.89642 4.98552 5.07645 5.13245 5.18789 5.24321 5.38670 5.42466 5.96869 6.34068 6.35218 6.58239 6.64688 7.13174 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.530 6.530 2 C -0.027 4.027 3 Si 0.697 3.303 4 C -0.051 4.051 5 C -0.170 4.170 6 C -0.188 4.188 7 C 0.035 3.965 8 C -0.034 4.034 9 C -0.052 4.052 10 C -0.148 4.148 11 C 0.181 3.819 12 O -0.475 6.475 13 C -0.164 4.164 14 C 0.563 3.437 15 O -0.515 6.515 16 N -0.727 5.727 17 C 0.122 3.878 18 C 0.077 3.923 19 F -0.195 7.195 20 C -0.146 4.146 21 C -0.108 4.108 22 H 0.107 0.893 23 C 0.087 3.913 24 O -0.573 6.573 25 C -0.141 4.141 26 C -0.053 4.053 27 O -0.165 6.165 28 H 0.384 0.616 29 H 0.133 0.867 30 H -0.251 1.251 31 H -0.246 1.246 32 H 0.154 0.846 33 H 0.154 0.846 34 H 0.140 0.860 35 H 0.146 0.854 36 H 0.400 0.600 37 H 0.404 0.596 38 H 0.094 0.906 39 H 0.085 0.915 40 H 0.099 0.901 41 H 0.086 0.914 42 H 0.051 0.949 43 H 0.050 0.950 44 H 0.382 0.618 45 H 0.089 0.911 46 H 0.103 0.897 47 H 0.136 0.864 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.769 1.673 -1.387 2.305 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.336 6.336 2 C -0.137 4.137 3 Si 0.597 3.403 4 C -0.101 4.101 5 C -0.189 4.189 6 C -0.207 4.207 7 C -0.015 4.015 8 C -0.034 4.034 9 C -0.070 4.070 10 C -0.167 4.167 11 C 0.134 3.866 12 O -0.287 6.287 13 C -0.167 4.167 14 C 0.350 3.650 15 O -0.391 6.391 16 N -0.381 5.381 17 C -0.002 4.002 18 C 0.059 3.941 19 F -0.176 7.176 20 C -0.184 4.184 21 C -0.126 4.126 22 H 0.125 0.875 23 C 0.009 3.991 24 O -0.378 6.378 25 C -0.179 4.179 26 C -0.072 4.072 27 O -0.062 6.062 28 H 0.232 0.768 29 H 0.150 0.850 30 H -0.175 1.175 31 H -0.170 1.170 32 H 0.172 0.828 33 H 0.172 0.828 34 H 0.158 0.842 35 H 0.164 0.836 36 H 0.259 0.741 37 H 0.240 0.760 38 H 0.112 0.888 39 H 0.103 0.897 40 H 0.118 0.882 41 H 0.105 0.895 42 H 0.069 0.931 43 H 0.068 0.932 44 H 0.230 0.770 45 H 0.108 0.892 46 H 0.121 0.879 47 H 0.154 0.846 Dipole moment (debyes) X Y Z Total from point charges -0.036 1.923 -1.192 2.263 hybrid contribution 0.132 -0.527 -1.116 1.241 sum 0.096 1.396 -2.309 2.700 Atomic orbital electron populations 1.86565 1.16142 1.81742 1.49148 1.24396 0.85213 1.11198 0.92939 0.94331 0.81729 0.76962 0.87276 1.22903 1.01178 0.93868 0.92133 1.21569 1.03728 0.95703 0.97920 1.21857 1.02771 0.98456 0.97618 1.20266 1.02992 0.87424 0.90801 1.17569 1.00261 0.94107 0.91445 1.21132 0.95295 0.98471 0.92127 1.21396 1.00895 0.96793 0.97596 1.18587 0.93086 0.90558 0.84398 1.84752 1.23951 1.92168 1.27815 1.20219 1.05488 0.94572 0.96456 1.17948 0.79891 0.83778 0.83378 1.90847 1.39874 1.84091 1.24277 1.45724 1.58633 1.08697 1.25012 1.21618 1.00869 0.80917 0.96806 1.22605 0.99124 0.92955 0.79439 1.92867 1.95535 1.88645 1.40523 1.23786 0.95247 0.97491 1.01848 1.22430 0.95296 0.94195 1.00727 0.87458 1.22105 0.88275 0.95539 0.93188 1.86485 1.47550 1.40330 1.63477 1.23595 0.98429 0.93672 1.02214 1.21314 0.94313 0.96661 0.94882 1.83919 1.58073 1.37744 1.26502 0.76831 0.84968 1.17512 1.16993 0.82821 0.82787 0.84183 0.83593 0.74133 0.76032 0.88833 0.89705 0.88211 0.89547 0.93098 0.93215 0.77020 0.89229 0.87886 0.84639 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 0.31 12.88 -35.23 -0.45 -0.15 16 2 C -0.03 0.02 2.98 36.00 0.11 0.13 16 3 Si 0.70 -0.75 32.11 -169.99 -5.46 -6.20 16 4 C -0.05 -0.03 6.20 -35.56 -0.22 -0.25 16 5 C -0.17 -0.10 10.78 -39.80 -0.43 -0.53 16 6 C -0.19 -0.04 10.26 -39.37 -0.40 -0.44 16 7 C 0.04 0.03 7.03 -36.49 -0.26 -0.23 16 8 C -0.03 -0.01 5.87 -105.03 -0.62 -0.62 16 9 C -0.05 0.06 9.54 -39.16 -0.37 -0.32 16 10 C -0.15 0.10 9.96 -39.54 -0.39 -0.29 16 11 C 0.18 0.24 6.72 -38.63 -0.26 -0.02 16 12 O -0.48 -0.95 11.55 -40.60 -0.47 -1.41 16 13 C -0.16 -0.25 5.88 -104.90 -0.62 -0.86 16 14 C 0.56 1.56 7.76 -12.45 -0.10 1.47 16 15 O -0.52 -3.02 15.14 -16.66 -0.25 -3.27 16 16 N -0.73 -0.32 5.40 -61.34 -0.33 -0.65 16 17 C 0.12 -0.03 5.26 -4.04 -0.02 -0.05 16 18 C 0.08 -0.09 1.88 -89.80 -0.17 -0.26 16 19 F -0.20 -0.17 16.67 2.25 0.04 -0.13 16 20 C -0.15 0.25 7.09 -25.78 -0.18 0.07 16 21 C -0.11 0.19 3.66 -89.67 -0.33 -0.13 16 22 H 0.11 -0.13 7.70 -51.93 -0.40 -0.52 16 23 C 0.09 -0.17 6.89 37.15 0.26 0.09 16 24 O -0.57 0.20 13.66 -35.23 -0.48 -0.29 16 25 C -0.14 0.33 7.12 -25.91 -0.18 0.15 16 26 C -0.05 -0.01 9.20 -38.78 -0.36 -0.37 16 27 O -0.16 -0.15 8.80 4.59 0.04 -0.11 16 28 H 0.38 -1.64 8.70 45.56 0.40 -1.25 16 29 H 0.13 -0.14 7.96 -51.93 -0.41 -0.56 16 30 H -0.25 -0.46 7.11 56.52 0.40 -0.06 16 31 H -0.25 -0.34 7.11 56.52 0.40 0.06 16 32 H 0.15 -0.07 8.06 -52.48 -0.42 -0.49 16 33 H 0.15 -0.31 7.24 -52.49 -0.38 -0.69 16 34 H 0.14 -0.47 6.96 -52.48 -0.37 -0.83 16 35 H 0.15 -0.37 8.06 -52.49 -0.42 -0.79 16 36 H 0.40 -0.70 9.06 45.56 0.41 -0.29 16 37 H 0.40 -0.42 6.10 -40.82 -0.25 -0.67 16 38 H 0.09 -0.02 7.38 -51.93 -0.38 -0.40 16 39 H 0.08 0.01 8.14 -51.93 -0.42 -0.41 16 40 H 0.10 -0.21 7.90 -51.93 -0.41 -0.62 16 41 H 0.09 -0.12 8.10 -51.93 -0.42 -0.54 16 42 H 0.05 -0.14 8.14 -51.93 -0.42 -0.56 16 43 H 0.05 -0.14 7.85 -51.93 -0.41 -0.55 16 44 H 0.38 -1.67 9.12 45.56 0.42 -1.26 16 45 H 0.09 -0.27 8.10 -51.93 -0.42 -0.69 16 46 H 0.10 -0.29 8.10 -51.93 -0.42 -0.71 16 47 H 0.14 -0.18 6.24 -52.49 -0.33 -0.51 16 LS Contribution 403.42 15.07 6.08 6.08 Total: 0.00 -10.86 403.42 -10.10 -20.95 By element: Atomic # 1 Polarization: -8.08 SS G_CDS: -4.26 Total: -12.34 kcal Atomic # 6 Polarization: 2.07 SS G_CDS: -4.55 Total: -2.48 kcal Atomic # 7 Polarization: -0.32 SS G_CDS: -0.33 Total: -0.65 kcal Atomic # 8 Polarization: -3.61 SS G_CDS: -1.62 Total: -5.23 kcal Atomic # 9 Polarization: -0.17 SS G_CDS: 0.04 Total: -0.13 kcal Atomic # 14 Polarization: -0.75 SS G_CDS: -5.46 Total: -6.20 kcal Total LS contribution 6.08 Total: 6.08 kcal Total: -10.86 -10.10 -20.95 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16500644_13259648.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -108.538 kcal (2) G-P(sol) polarization free energy of solvation -10.857 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -119.395 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.096 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.953 kcal (6) G-S(sol) free energy of system = (1) + (5) -129.491 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.31 seconds