Wall clock time and date at job start Sun Mar 7 2021 09:02:13 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42907 * 1 3 3 Si 1.86300 * 109.46665 * 2 1 4 4 C 1.50696 * 109.47144 * 120.00000 * 2 1 3 5 5 C 1.34704 * 125.66722 * 65.00012 * 4 2 1 6 6 C 1.40969 * 107.03369 * 179.97438 * 5 4 2 7 7 C 1.35940 * 106.73560 * 0.02562 * 6 5 4 8 8 C 1.47821 * 125.92368 * 180.02562 * 7 6 5 9 9 C 1.39796 * 120.00383 * 359.97263 * 8 7 6 10 10 C 1.37810 * 120.24871 * 180.02562 * 9 8 7 11 11 C 1.38784 * 120.24060 * 359.97438 * 10 9 8 12 12 O 1.35651 * 119.99903 * 179.97438 * 11 10 9 13 13 C 1.40245 * 119.99428 * 0.02562 * 11 10 9 14 14 C 1.47566 * 120.11668 * 180.02562 * 13 11 10 15 15 O 1.21588 * 120.00388 * 359.97438 * 14 13 11 16 16 N 1.34779 * 119.99849 * 180.02562 * 14 13 11 17 17 C 1.46506 * 120.00145 * 180.02562 * 16 14 13 18 18 C 1.52999 * 109.46838 * 179.97438 * 17 16 14 19 19 F 1.39895 * 112.85067 * 314.65898 * 18 17 16 20 20 C 1.53781 * 113.61474 * 85.86338 * 18 17 16 21 21 C 1.54048 * 86.98906 * 89.15803 * 20 18 17 22 22 H 1.09004 * 113.69008 * 270.87258 * 21 20 18 23 23 C 1.52994 * 113.62104 * 139.97401 * 21 20 18 24 24 O 1.42904 * 109.46956 * 87.50633 * 23 21 20 25 25 C 1.53782 * 87.07878 * 25.43020 * 21 20 18 26 26 C 1.39215 * 119.99654 * 179.97438 * 8 7 6 27 27 O 1.34344 * 125.66559 * 245.31299 * 4 2 1 28 28 H 0.96696 * 114.00025 * 300.00002 * 1 2 3 29 29 H 1.08993 * 109.47114 * 240.00054 * 2 1 3 30 30 H 1.48504 * 109.99826 * 178.68058 * 3 2 1 31 31 H 1.48502 * 110.00389 * 299.99765 * 3 2 1 32 32 H 1.08008 * 126.48154 * 359.97438 * 5 4 2 33 33 H 1.07996 * 126.63343 * 179.97438 * 6 5 4 34 34 H 1.08009 * 119.87952 * 0.02562 * 9 8 7 35 35 H 1.07997 * 119.88201 * 179.97438 * 10 9 8 36 36 H 0.96701 * 113.99858 * 90.00707 * 12 11 10 37 37 H 0.97002 * 119.99912 * 359.97438 * 16 14 13 38 38 H 1.08998 * 109.46458 * 299.99385 * 17 16 14 39 39 H 1.08996 * 109.47219 * 59.98894 * 17 16 14 40 40 H 1.09002 * 113.60779 * 203.65980 * 20 18 17 41 41 H 1.08997 * 113.61317 * 334.56201 * 20 18 17 42 42 H 1.09002 * 109.47618 * 207.50142 * 23 21 20 43 43 H 1.08998 * 109.47543 * 327.50934 * 23 21 20 44 44 H 0.96698 * 114.00469 * 180.02562 * 24 23 21 45 45 H 1.08999 * 113.61814 * 220.02891 * 25 21 20 46 46 H 1.08995 * 113.69417 * 89.13092 * 25 21 20 47 47 H 1.07997 * 120.12125 * 359.69604 * 26 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9314 -0.7104 1.2304 5 6 1.7572 -2.0167 1.5093 6 6 2.3824 -2.2612 2.7489 7 6 2.9086 -1.0779 3.1621 8 6 3.6598 -0.8532 4.4153 9 6 3.8817 -1.9150 5.2972 10 6 4.5810 -1.7111 6.4671 11 6 5.0705 -0.4503 6.7781 12 8 5.7577 -0.2550 7.9313 13 6 4.8537 0.6221 5.9007 14 6 5.3735 1.9637 6.2284 15 8 5.9906 2.1411 7.2610 16 7 5.1634 2.9927 5.3837 17 6 5.6799 4.3246 5.7088 18 6 5.3069 5.3025 4.5928 19 9 5.5404 4.7833 3.3150 20 6 3.9102 5.9239 4.7597 21 6 4.5919 7.0360 5.5792 22 1 4.6626 6.8145 6.6442 23 6 4.0352 8.4332 5.2986 24 8 2.9160 8.6803 6.1522 25 6 5.8767 6.7163 4.7969 26 6 4.1463 0.4157 4.7172 27 8 2.6223 -0.1448 2.2342 28 1 -0.3933 0.4417 0.7650 29 1 1.7924 -0.5138 -0.8899 30 1 3.5346 1.7704 0.0321 31 1 1.5614 2.4680 -1.2085 32 1 1.2368 -2.7398 0.8987 33 1 2.4329 -3.2059 3.2699 34 1 3.5037 -2.8988 5.0609 35 1 4.7486 -2.5354 7.1443 36 1 6.7118 -0.3883 7.8479 37 1 4.6708 2.8513 4.5601 38 1 5.2453 4.6631 6.6493 39 1 6.7647 4.2801 5.8050 40 1 3.4742 6.2755 3.8245 41 1 3.2250 5.3080 5.3421 42 1 4.8085 9.1775 5.4890 43 1 3.7189 8.4960 4.2575 44 1 2.5114 9.5497 6.0285 45 1 6.7780 6.7396 5.4093 46 1 5.9788 7.2836 3.8718 47 1 3.9802 1.2363 4.0349 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16500644_13259648.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:02:13 Heat of formation + Delta-G solvation = -132.418842 kcal Electronic energy + Delta-G solvation = -34569.910700 eV Core-core repulsion = 29601.797184 eV Total energy + Delta-G solvation = -4968.113516 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 378.140 amu Computer time = 1.32 seconds Orbital eigenvalues (eV) -48.77915 -43.70947 -41.61456 -40.28851 -39.54141 -38.12420 -37.79497 -37.21375 -35.62369 -34.22018 -32.86161 -32.56130 -30.13973 -29.84869 -27.33305 -26.99157 -26.40080 -25.02737 -23.56072 -22.92909 -22.78760 -21.78769 -21.26401 -20.43334 -19.59665 -19.14853 -18.37824 -18.24363 -17.84194 -17.64806 -17.43713 -17.06681 -16.78998 -16.67656 -16.48612 -16.27647 -15.97491 -15.85820 -15.71468 -15.62266 -15.34576 -14.88842 -14.56590 -14.47714 -14.37362 -14.29299 -13.96308 -13.88716 -13.84547 -13.55274 -13.37147 -13.22175 -13.13618 -12.80511 -12.76983 -12.35894 -12.24466 -12.13082 -11.93405 -11.53243 -11.35776 -11.06862 -10.99675 -10.81871 -10.66985 -10.51107 -10.39000 -10.17969 -8.92025 -5.05344 -0.58046 -0.23940 0.76107 1.14678 1.42052 1.48153 1.75175 1.82033 1.85259 1.88580 2.59837 3.00434 3.08084 3.09481 3.20610 3.23112 3.27006 3.38491 3.45962 3.50362 3.63649 3.88339 3.91194 4.00797 4.04053 4.18941 4.26099 4.30512 4.34726 4.36641 4.39637 4.50513 4.59018 4.62781 4.65859 4.67025 4.68192 4.72836 4.78329 4.87251 4.91404 4.99198 5.00940 5.11934 5.18130 5.19185 5.32836 5.43526 5.49438 5.98545 6.25714 6.61037 6.71054 6.89580 6.98893 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.541 6.541 2 C -0.025 4.025 3 Si 0.769 3.231 4 C -0.057 4.057 5 C -0.182 4.182 6 C -0.188 4.188 7 C 0.022 3.978 8 C -0.041 4.041 9 C -0.043 4.043 10 C -0.145 4.145 11 C 0.166 3.834 12 O -0.494 6.494 13 C -0.180 4.180 14 C 0.560 3.440 15 O -0.554 6.554 16 N -0.718 5.718 17 C 0.121 3.879 18 C 0.076 3.924 19 F -0.207 7.207 20 C -0.143 4.143 21 C -0.109 4.109 22 H 0.098 0.902 23 C 0.084 3.916 24 O -0.597 6.597 25 C -0.133 4.133 26 C -0.052 4.052 27 O -0.173 6.173 28 H 0.399 0.601 29 H 0.136 0.864 30 H -0.292 1.292 31 H -0.278 1.278 32 H 0.162 0.838 33 H 0.176 0.824 34 H 0.167 0.833 35 H 0.166 0.834 36 H 0.411 0.589 37 H 0.411 0.589 38 H 0.092 0.908 39 H 0.080 0.920 40 H 0.106 0.894 41 H 0.081 0.919 42 H 0.060 0.940 43 H 0.060 0.940 44 H 0.397 0.603 45 H 0.096 0.904 46 H 0.112 0.888 47 H 0.144 0.856 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.464 1.072 -1.857 2.596 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.349 6.349 2 C -0.136 4.136 3 Si 0.674 3.326 4 C -0.107 4.107 5 C -0.201 4.201 6 C -0.207 4.207 7 C -0.028 4.028 8 C -0.041 4.041 9 C -0.061 4.061 10 C -0.163 4.163 11 C 0.119 3.881 12 O -0.307 6.307 13 C -0.184 4.184 14 C 0.348 3.652 15 O -0.433 6.433 16 N -0.371 5.371 17 C -0.003 4.003 18 C 0.058 3.942 19 F -0.187 7.187 20 C -0.180 4.180 21 C -0.127 4.127 22 H 0.116 0.884 23 C 0.007 3.993 24 O -0.405 6.405 25 C -0.171 4.171 26 C -0.071 4.071 27 O -0.071 6.071 28 H 0.250 0.750 29 H 0.153 0.847 30 H -0.219 1.219 31 H -0.205 1.205 32 H 0.180 0.820 33 H 0.193 0.807 34 H 0.184 0.816 35 H 0.184 0.816 36 H 0.272 0.728 37 H 0.248 0.752 38 H 0.110 0.890 39 H 0.098 0.902 40 H 0.125 0.875 41 H 0.100 0.900 42 H 0.078 0.922 43 H 0.078 0.922 44 H 0.247 0.753 45 H 0.115 0.885 46 H 0.130 0.870 47 H 0.162 0.838 Dipole moment (debyes) X Y Z Total from point charges -0.761 1.338 -1.671 2.272 hybrid contribution 0.342 -0.339 -1.012 1.121 sum -0.419 0.999 -2.683 2.894 Atomic orbital electron populations 1.86532 1.15982 1.82115 1.50318 1.24434 0.85369 1.11087 0.92702 0.93428 0.78246 0.75601 0.85346 1.23123 1.01099 0.94173 0.92262 1.21801 1.04017 0.95928 0.98376 1.22158 1.02002 0.99073 0.97453 1.20448 1.03555 0.87738 0.91022 1.17702 1.00404 0.94386 0.91646 1.21437 0.94127 0.99244 0.91295 1.21589 1.00271 0.96446 0.98011 1.18864 0.93508 0.91383 0.84298 1.84706 1.25089 1.92428 1.28497 1.20205 1.06694 0.94077 0.97403 1.18230 0.79362 0.84603 0.83017 1.90814 1.41850 1.84767 1.25887 1.45703 1.57982 1.08629 1.24831 1.21651 1.00545 0.80814 0.97272 1.22659 0.99945 0.93171 0.78434 1.92844 1.95668 1.88893 1.41291 1.23787 0.94769 0.97386 1.02108 1.22403 0.95613 0.94508 1.00212 0.88387 1.22186 0.88201 0.95414 0.93511 1.86439 1.48180 1.41785 1.64124 1.23589 0.98453 0.92493 1.02604 1.21386 0.93955 0.97297 0.94485 1.83903 1.58285 1.38141 1.26751 0.75024 0.84668 1.21861 1.20458 0.82030 0.80676 0.81553 0.81623 0.72838 0.75191 0.89018 0.90212 0.87523 0.90022 0.92202 0.92178 0.75283 0.88546 0.86971 0.83809 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.99 12.88 -148.98 -1.92 -0.93 16 2 C -0.03 0.04 2.98 71.23 0.21 0.25 16 3 Si 0.77 -1.29 32.11 68.60 2.20 0.92 16 4 C -0.06 -0.04 6.20 24.87 0.15 0.12 16 5 C -0.18 -0.07 10.78 22.13 0.24 0.17 16 6 C -0.19 0.16 10.26 22.41 0.23 0.39 16 7 C 0.02 0.02 7.03 24.27 0.17 0.19 16 8 C -0.04 0.00 5.87 -20.13 -0.12 -0.12 16 9 C -0.04 0.15 9.54 22.55 0.22 0.36 16 10 C -0.15 0.30 9.96 22.30 0.22 0.52 16 11 C 0.17 0.56 6.72 22.89 0.15 0.71 16 12 O -0.49 -2.60 11.55 -68.67 -0.79 -3.40 16 13 C -0.18 -0.75 5.88 -20.04 -0.12 -0.87 16 14 C 0.56 4.10 7.76 86.70 0.67 4.77 16 15 O -0.55 -7.73 15.14 16.99 0.26 -7.47 16 16 N -0.72 -1.67 5.40 -466.23 -2.52 -4.19 16 17 C 0.12 0.11 5.26 86.38 0.45 0.56 16 18 C 0.08 -0.13 1.88 -10.26 -0.02 -0.15 16 19 F -0.21 -0.46 16.67 44.97 0.75 0.29 16 20 C -0.14 0.43 7.09 31.21 0.22 0.65 16 21 C -0.11 0.36 3.66 -10.18 -0.04 0.32 16 22 H 0.10 -0.14 7.70 -2.39 -0.02 -0.15 16 23 C 0.08 -0.35 6.89 71.98 0.50 0.14 16 24 O -0.60 0.38 13.66 -148.98 -2.03 -1.65 16 25 C -0.13 0.63 7.12 31.12 0.22 0.85 16 26 C -0.05 -0.05 9.20 22.79 0.21 0.16 16 27 O -0.17 -0.31 8.80 -6.49 -0.06 -0.36 16 28 H 0.40 -3.75 8.70 -74.06 -0.64 -4.39 16 29 H 0.14 -0.32 7.96 -2.39 -0.02 -0.34 16 30 H -0.29 -1.49 7.11 99.48 0.71 -0.78 16 31 H -0.28 -1.01 7.11 99.48 0.71 -0.30 16 32 H 0.16 -0.29 8.06 -2.91 -0.02 -0.32 16 33 H 0.18 -1.07 7.24 -2.91 -0.02 -1.10 16 34 H 0.17 -1.52 6.96 -2.91 -0.02 -1.54 16 35 H 0.17 -1.06 8.06 -2.91 -0.02 -1.09 16 36 H 0.41 -0.78 9.06 -74.06 -0.67 -1.46 16 37 H 0.41 -0.38 6.10 -92.71 -0.57 -0.95 16 38 H 0.09 0.12 7.38 -2.39 -0.02 0.11 16 39 H 0.08 0.15 8.14 -2.39 -0.02 0.14 16 40 H 0.11 -0.46 7.90 -2.39 -0.02 -0.48 16 41 H 0.08 -0.17 8.10 -2.39 -0.02 -0.18 16 42 H 0.06 -0.36 8.14 -2.39 -0.02 -0.38 16 43 H 0.06 -0.38 7.85 -2.39 -0.02 -0.40 16 44 H 0.40 -3.49 9.12 -74.06 -0.68 -4.16 16 45 H 0.10 -0.57 8.10 -2.39 -0.02 -0.59 16 46 H 0.11 -0.70 8.10 -2.39 -0.02 -0.72 16 47 H 0.14 -0.27 6.24 -2.91 -0.02 -0.29 16 Total: 0.00 -25.17 403.42 -1.97 -27.15 By element: Atomic # 1 Polarization: -17.96 SS G_CDS: -1.44 Total: -19.40 kcal Atomic # 6 Polarization: 5.47 SS G_CDS: 3.58 Total: 9.05 kcal Atomic # 7 Polarization: -1.67 SS G_CDS: -2.52 Total: -4.19 kcal Atomic # 8 Polarization: -9.26 SS G_CDS: -4.55 Total: -13.81 kcal Atomic # 9 Polarization: -0.46 SS G_CDS: 0.75 Total: 0.29 kcal Atomic # 14 Polarization: -1.29 SS G_CDS: 2.20 Total: 0.92 kcal Total: -25.17 -1.97 -27.15 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16500644_13259648.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -105.274 kcal (2) G-P(sol) polarization free energy of solvation -25.173 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -130.446 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.972 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -27.145 kcal (6) G-S(sol) free energy of system = (1) + (5) -132.419 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.32 seconds