Wall clock time and date at job start Sun Mar 7 2021 09:02:18 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42897 * 1 3 3 Si 1.86298 * 109.47037 * 2 1 4 4 C 1.50700 * 109.46827 * 119.99840 * 2 1 3 5 5 C 1.34193 * 126.54014 * 255.04109 * 4 2 1 6 6 N 1.36862 * 109.97020 * 179.97438 * 5 4 2 7 7 C 1.37404 * 109.97657 * 0.02562 * 6 5 4 8 8 C 1.39333 * 133.24785 * 179.97438 * 7 6 5 9 9 C 1.36353 * 120.23562 * 179.73646 * 8 7 6 10 10 C 1.40174 * 120.66787 * 0.52009 * 9 8 7 11 11 C 1.47652 * 119.97336 * 179.75321 * 10 9 8 12 12 O 1.21576 * 120.00124 * 179.72581 * 11 10 9 13 13 N 1.34778 * 119.99945 * 359.72615 * 11 10 9 14 14 C 1.46500 * 119.99831 * 179.97438 * 13 11 10 15 15 C 1.53000 * 109.47052 * 180.02562 * 14 13 11 16 16 F 1.39905 * 112.84963 * 50.33722 * 15 14 13 17 17 C 1.53781 * 113.61427 * 181.53003 * 15 14 13 18 18 C 1.53787 * 87.07827 * 140.06737 * 17 15 14 19 19 H 1.09004 * 113.60948 * 220.02104 * 18 17 15 20 20 C 1.52996 * 113.61456 * 89.20345 * 18 17 15 21 21 O 1.42906 * 109.47122 * 174.99794 * 20 18 17 22 22 C 1.53775 * 113.69292 * 279.06759 * 15 14 13 23 23 C 1.39187 * 120.04893 * 359.48214 * 10 9 8 24 24 C 1.39230 * 119.39912 * 0.25023 * 23 10 9 25 25 H 0.96700 * 114.00092 * 300.00102 * 1 2 3 26 26 H 1.09003 * 109.47453 * 239.99976 * 2 1 3 27 27 H 1.48500 * 110.00095 * 299.99524 * 3 2 1 28 28 H 1.48497 * 110.00425 * 61.31634 * 3 2 1 29 29 H 1.08004 * 125.01386 * 359.93323 * 5 4 2 30 30 H 0.96994 * 125.01330 * 180.02562 * 6 5 4 31 31 H 1.07998 * 119.88047 * 359.97438 * 8 7 6 32 32 H 1.07998 * 119.66420 * 180.25861 * 9 8 7 33 33 H 0.97000 * 119.99788 * 0.02562 * 13 11 10 34 34 H 1.08994 * 109.47050 * 60.00514 * 14 13 11 35 35 H 1.08997 * 109.47643 * 300.00240 * 14 13 11 36 36 H 1.08999 * 113.61554 * 254.61065 * 17 15 14 37 37 H 1.08996 * 113.61406 * 25.43654 * 17 15 14 38 38 H 1.09001 * 109.47278 * 294.99543 * 20 18 17 39 39 H 1.08997 * 109.47077 * 54.99616 * 20 18 17 40 40 H 0.96699 * 113.99795 * 179.97438 * 21 20 18 41 41 H 1.09003 * 113.61685 * 334.55633 * 22 15 14 42 42 H 1.09002 * 113.61807 * 105.45839 * 22 15 14 43 43 H 1.08001 * 120.29801 * 180.27623 * 23 10 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7564 0.0000 4 6 1.9312 -0.7104 1.2305 5 6 2.4599 -0.1385 2.3233 6 7 2.8016 -1.1002 3.2352 7 6 2.4952 -2.3453 2.7415 8 6 2.6345 -3.6349 3.2503 9 6 2.2268 -4.7100 2.5174 10 6 1.6732 -4.5369 1.2413 11 6 1.2417 -5.7124 0.4588 12 8 0.7569 -5.5625 -0.6460 13 7 1.3853 -6.9514 0.9693 14 6 0.9567 -8.1176 0.1931 15 6 1.2280 -9.3919 0.9952 16 9 0.7275 -9.3294 2.3002 17 6 0.8461 -10.6818 0.2502 18 6 2.1288 -11.3024 0.8289 19 1 2.6639 -11.9369 0.1224 20 6 1.9265 -11.9689 2.1911 21 8 3.1378 -12.6134 2.5906 22 6 2.6868 -9.8722 0.9174 23 6 1.5247 -3.2576 0.7137 24 6 1.9352 -2.1577 1.4622 25 1 -0.3933 0.4417 0.7650 26 1 1.7924 -0.5138 -0.8900 27 1 1.5615 2.4679 -1.2085 28 1 1.5878 2.4586 1.2241 29 1 2.5963 0.9238 2.4624 30 1 3.2011 -0.9282 4.1022 31 1 3.0636 -3.7832 4.2303 32 1 2.3353 -5.7052 2.9226 33 1 1.7718 -7.0709 1.8509 34 1 1.5108 -8.1534 -0.7448 35 1 -0.1100 -8.0417 -0.0178 36 1 -0.0684 -11.1453 0.6201 37 1 0.8600 -10.5797 -0.8349 38 1 1.6567 -11.2132 2.9289 39 1 1.1284 -12.7077 2.1192 40 1 3.0827 -13.0578 3.4477 41 1 3.2053 -9.5491 0.0147 42 1 3.2582 -9.6820 1.8260 43 1 1.0945 -3.1193 -0.2673 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16500644_13287722.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:02:18 Heat of formation + Delta-G solvation = -74.414172 kcal Electronic energy + Delta-G solvation = -28236.663156 eV Core-core repulsion = 23971.229526 eV Total energy + Delta-G solvation = -4265.433631 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 335.137 amu Computer time = 0.97 seconds Orbital eigenvalues (eV) -48.92720 -42.49242 -40.71733 -39.85342 -37.99559 -37.47614 -37.18204 -35.53623 -33.29109 -31.37063 -30.62398 -29.72251 -27.21958 -26.95821 -26.48763 -24.49177 -23.49896 -22.83516 -21.50461 -20.82641 -20.18997 -19.38226 -18.84564 -18.33888 -17.70122 -17.43742 -17.13776 -16.85513 -16.83823 -16.32208 -16.08711 -15.86571 -15.63262 -15.49390 -15.38167 -15.15108 -15.05425 -14.76857 -14.61482 -14.20759 -14.12830 -13.75747 -13.68931 -13.55272 -13.50026 -13.29544 -12.58686 -12.50434 -12.44644 -12.11262 -11.87624 -11.77687 -11.61168 -11.37348 -10.90817 -10.79680 -10.79371 -10.46082 -10.11933 -9.33227 -8.84088 -4.96045 -0.05376 0.18614 1.30061 1.46604 1.55668 1.94249 1.98202 2.01129 2.07861 2.88687 2.96657 3.03450 3.12885 3.22575 3.39714 3.50012 3.58053 3.72172 3.79161 3.81186 3.86519 4.08170 4.14353 4.31903 4.36232 4.38812 4.41921 4.44964 4.48444 4.52571 4.57283 4.59171 4.62925 4.76366 4.81077 4.83073 5.00953 5.02575 5.17336 5.24872 5.35208 5.38320 5.51649 5.59704 5.97504 6.34435 6.50044 6.52810 6.62126 7.28938 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.528 6.528 2 C -0.042 4.042 3 Si 0.687 3.313 4 C -0.187 4.187 5 C 0.059 3.941 6 N -0.585 5.585 7 C 0.119 3.881 8 C -0.133 4.133 9 C -0.066 4.066 10 C -0.169 4.169 11 C 0.566 3.434 12 O -0.537 6.537 13 N -0.727 5.727 14 C 0.114 3.886 15 C 0.077 3.923 16 F -0.185 7.185 17 C -0.141 4.141 18 C -0.111 4.111 19 H 0.096 0.904 20 C 0.085 3.915 21 O -0.573 6.573 22 C -0.146 4.146 23 C 0.009 3.991 24 C -0.103 4.103 25 H 0.373 0.627 26 H 0.116 0.884 27 H -0.256 1.256 28 H -0.260 1.260 29 H 0.176 0.824 30 H 0.421 0.579 31 H 0.128 0.872 32 H 0.128 0.872 33 H 0.402 0.598 34 H 0.091 0.909 35 H 0.081 0.919 36 H 0.088 0.912 37 H 0.111 0.889 38 H 0.058 0.942 39 H 0.050 0.950 40 H 0.383 0.617 41 H 0.105 0.895 42 H 0.085 0.915 43 H 0.139 0.861 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.993 0.254 4.890 6.318 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.334 6.334 2 C -0.153 4.153 3 Si 0.588 3.412 4 C -0.194 4.194 5 C -0.068 4.068 6 N -0.187 5.187 7 C 0.011 3.989 8 C -0.154 4.154 9 C -0.085 4.085 10 C -0.173 4.173 11 C 0.355 3.645 12 O -0.414 6.414 13 N -0.380 5.380 14 C -0.010 4.010 15 C 0.058 3.942 16 F -0.165 7.165 17 C -0.179 4.179 18 C -0.130 4.130 19 H 0.115 0.885 20 C 0.007 3.993 21 O -0.379 6.379 22 C -0.184 4.184 23 C -0.010 4.010 24 C -0.107 4.107 25 H 0.220 0.780 26 H 0.134 0.866 27 H -0.180 1.180 28 H -0.185 1.185 29 H 0.193 0.807 30 H 0.259 0.741 31 H 0.146 0.854 32 H 0.146 0.854 33 H 0.238 0.762 34 H 0.109 0.891 35 H 0.100 0.900 36 H 0.106 0.894 37 H 0.129 0.871 38 H 0.076 0.924 39 H 0.069 0.931 40 H 0.230 0.770 41 H 0.123 0.877 42 H 0.104 0.896 43 H 0.157 0.843 Dipole moment (debyes) X Y Z Total from point charges 3.750 1.182 3.095 5.004 hybrid contribution -0.981 -0.428 2.201 2.448 sum 2.770 0.753 5.297 6.024 Atomic orbital electron populations 1.86642 1.17906 1.79877 1.48973 1.24370 0.83525 1.10059 0.97324 0.95190 0.91409 0.74118 0.80501 1.20695 1.09025 0.91909 0.97819 1.21754 1.01047 0.94443 0.89565 1.41736 1.54681 1.04144 1.18124 1.18440 0.99812 0.86492 0.94197 1.19664 1.05736 0.88830 1.01176 1.20596 0.96595 0.98387 0.92972 1.19499 1.08393 0.93169 0.96229 1.18164 0.77914 0.82712 0.85715 1.90804 1.44371 1.86014 1.20222 1.45711 1.65250 1.05501 1.21548 1.21786 1.02086 0.82437 0.94720 1.22237 0.96708 0.95761 0.79466 1.92846 1.88615 1.97176 1.37852 1.23561 0.98972 0.93643 1.01731 1.22256 0.97214 0.96256 0.97232 0.88546 1.22067 0.86492 0.95747 0.94969 1.86450 1.35770 1.73653 1.42034 1.23656 0.94456 0.95533 1.04715 1.20693 0.92317 0.89128 0.98895 1.18910 1.04589 0.92924 0.94303 0.77952 0.86585 1.18011 1.18502 0.80702 0.74120 0.85411 0.85448 0.76162 0.89085 0.90038 0.89382 0.87100 0.92387 0.93144 0.77010 0.87695 0.89620 0.84294 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -1.18 12.88 -35.23 -0.45 -1.63 16 2 C -0.04 -0.02 3.06 36.01 0.11 0.09 16 3 Si 0.69 -0.98 30.82 -169.99 -5.24 -6.22 16 4 C -0.19 -0.11 5.58 -102.69 -0.57 -0.68 16 5 C 0.06 -0.10 10.43 -16.73 -0.17 -0.27 16 6 N -0.58 1.07 6.05 -10.61 -0.06 1.01 16 7 C 0.12 0.08 7.27 -83.95 -0.61 -0.53 16 8 C -0.13 0.05 10.00 -39.85 -0.40 -0.35 16 9 C -0.07 -0.01 9.46 -39.53 -0.37 -0.38 16 10 C -0.17 -0.44 5.87 -104.97 -0.62 -1.06 16 11 C 0.57 2.11 7.76 -12.42 -0.10 2.01 16 12 O -0.54 -3.94 16.33 5.30 0.09 -3.85 16 13 N -0.73 -0.60 5.42 -61.31 -0.33 -0.93 16 14 C 0.11 0.01 5.35 -4.04 -0.02 -0.01 16 15 C 0.08 -0.08 1.63 -89.81 -0.15 -0.22 16 16 F -0.18 -0.13 15.08 2.25 0.03 -0.10 16 17 C -0.14 0.28 7.13 -25.92 -0.18 0.09 16 18 C -0.11 0.10 4.19 -89.81 -0.38 -0.27 16 19 H 0.10 -0.05 8.14 -51.93 -0.42 -0.48 16 20 C 0.08 -0.04 6.66 37.16 0.25 0.21 16 21 O -0.57 -0.34 13.66 -35.23 -0.48 -0.82 16 22 C -0.15 0.20 7.07 -25.92 -0.18 0.01 16 23 C 0.01 0.03 9.64 -38.86 -0.37 -0.34 16 24 C -0.10 -0.24 6.34 -105.16 -0.67 -0.91 16 25 H 0.37 -0.34 8.70 45.56 0.40 0.06 16 26 H 0.12 0.05 7.96 -51.93 -0.41 -0.36 16 27 H -0.26 -0.58 7.11 56.52 0.40 -0.18 16 28 H -0.26 0.09 7.00 56.52 0.40 0.49 16 29 H 0.18 -0.76 6.27 -52.48 -0.33 -1.09 16 30 H 0.42 -2.04 8.96 -40.82 -0.37 -2.40 16 31 H 0.13 -0.36 8.06 -52.49 -0.42 -0.78 16 32 H 0.13 -0.31 6.36 -52.49 -0.33 -0.64 16 33 H 0.40 -0.43 6.23 -40.82 -0.25 -0.68 16 34 H 0.09 -0.03 7.98 -51.93 -0.41 -0.44 16 35 H 0.08 0.08 8.14 -51.93 -0.42 -0.35 16 36 H 0.09 -0.18 8.10 -51.93 -0.42 -0.60 16 37 H 0.11 -0.36 8.10 -51.93 -0.42 -0.78 16 38 H 0.06 -0.02 6.32 -51.93 -0.33 -0.35 16 39 H 0.05 -0.06 8.14 -51.93 -0.42 -0.48 16 40 H 0.38 -1.34 9.12 45.56 0.42 -0.92 16 41 H 0.10 -0.23 7.99 -51.93 -0.41 -0.64 16 42 H 0.09 -0.07 8.10 -51.93 -0.42 -0.49 16 43 H 0.14 0.62 7.64 -52.49 -0.40 0.22 16 LS Contribution 362.14 15.07 5.46 5.46 Total: 0.00 -10.58 362.14 -10.03 -20.61 By element: Atomic # 1 Polarization: -6.31 SS G_CDS: -4.60 Total: -10.91 kcal Atomic # 6 Polarization: 1.82 SS G_CDS: -4.44 Total: -2.62 kcal Atomic # 7 Polarization: 0.47 SS G_CDS: -0.40 Total: 0.08 kcal Atomic # 8 Polarization: -5.45 SS G_CDS: -0.85 Total: -6.30 kcal Atomic # 9 Polarization: -0.13 SS G_CDS: 0.03 Total: -0.10 kcal Atomic # 14 Polarization: -0.98 SS G_CDS: -5.24 Total: -6.22 kcal Total LS contribution 5.46 Total: 5.46 kcal Total: -10.58 -10.03 -20.61 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16500644_13287722.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -53.804 kcal (2) G-P(sol) polarization free energy of solvation -10.577 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -64.380 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.034 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.610 kcal (6) G-S(sol) free energy of system = (1) + (5) -74.414 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.97 seconds