Wall clock time and date at job start Sun Mar 7 2021 09:02:17 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42897 * 1 3 3 Si 1.86298 * 109.47037 * 2 1 4 4 C 1.50700 * 109.46827 * 119.99840 * 2 1 3 5 5 C 1.34193 * 126.54014 * 255.04109 * 4 2 1 6 6 N 1.36862 * 109.97020 * 179.97438 * 5 4 2 7 7 C 1.37404 * 109.97657 * 0.02562 * 6 5 4 8 8 C 1.39333 * 133.24785 * 179.97438 * 7 6 5 9 9 C 1.36353 * 120.23562 * 179.73646 * 8 7 6 10 10 C 1.40174 * 120.66787 * 0.52009 * 9 8 7 11 11 C 1.47652 * 119.97336 * 179.75321 * 10 9 8 12 12 O 1.21576 * 120.00124 * 179.72581 * 11 10 9 13 13 N 1.34778 * 119.99945 * 359.72615 * 11 10 9 14 14 C 1.46500 * 119.99831 * 179.97438 * 13 11 10 15 15 C 1.53000 * 109.47052 * 180.02562 * 14 13 11 16 16 F 1.39905 * 112.84963 * 50.33722 * 15 14 13 17 17 C 1.53781 * 113.61427 * 181.53003 * 15 14 13 18 18 C 1.53787 * 87.07827 * 140.06737 * 17 15 14 19 19 H 1.09004 * 113.60948 * 220.02104 * 18 17 15 20 20 C 1.52996 * 113.61456 * 89.20345 * 18 17 15 21 21 O 1.42906 * 109.47122 * 174.99794 * 20 18 17 22 22 C 1.53775 * 113.69292 * 279.06759 * 15 14 13 23 23 C 1.39187 * 120.04893 * 359.48214 * 10 9 8 24 24 C 1.39230 * 119.39912 * 0.25023 * 23 10 9 25 25 H 0.96700 * 114.00092 * 300.00102 * 1 2 3 26 26 H 1.09003 * 109.47453 * 239.99976 * 2 1 3 27 27 H 1.48500 * 110.00095 * 299.99524 * 3 2 1 28 28 H 1.48497 * 110.00425 * 61.31634 * 3 2 1 29 29 H 1.08004 * 125.01386 * 359.93323 * 5 4 2 30 30 H 0.96994 * 125.01330 * 180.02562 * 6 5 4 31 31 H 1.07998 * 119.88047 * 359.97438 * 8 7 6 32 32 H 1.07998 * 119.66420 * 180.25861 * 9 8 7 33 33 H 0.97000 * 119.99788 * 0.02562 * 13 11 10 34 34 H 1.08994 * 109.47050 * 60.00514 * 14 13 11 35 35 H 1.08997 * 109.47643 * 300.00240 * 14 13 11 36 36 H 1.08999 * 113.61554 * 254.61065 * 17 15 14 37 37 H 1.08996 * 113.61406 * 25.43654 * 17 15 14 38 38 H 1.09001 * 109.47278 * 294.99543 * 20 18 17 39 39 H 1.08997 * 109.47077 * 54.99616 * 20 18 17 40 40 H 0.96699 * 113.99795 * 179.97438 * 21 20 18 41 41 H 1.09003 * 113.61685 * 334.55633 * 22 15 14 42 42 H 1.09002 * 113.61807 * 105.45839 * 22 15 14 43 43 H 1.08001 * 120.29801 * 180.27623 * 23 10 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7564 0.0000 4 6 1.9312 -0.7104 1.2305 5 6 2.4599 -0.1385 2.3233 6 7 2.8016 -1.1002 3.2352 7 6 2.4952 -2.3453 2.7415 8 6 2.6345 -3.6349 3.2503 9 6 2.2268 -4.7100 2.5174 10 6 1.6732 -4.5369 1.2413 11 6 1.2417 -5.7124 0.4588 12 8 0.7569 -5.5625 -0.6460 13 7 1.3853 -6.9514 0.9693 14 6 0.9567 -8.1176 0.1931 15 6 1.2280 -9.3919 0.9952 16 9 0.7275 -9.3294 2.3002 17 6 0.8461 -10.6818 0.2502 18 6 2.1288 -11.3024 0.8289 19 1 2.6639 -11.9369 0.1224 20 6 1.9265 -11.9689 2.1911 21 8 3.1378 -12.6134 2.5906 22 6 2.6868 -9.8722 0.9174 23 6 1.5247 -3.2576 0.7137 24 6 1.9352 -2.1577 1.4622 25 1 -0.3933 0.4417 0.7650 26 1 1.7924 -0.5138 -0.8900 27 1 1.5615 2.4679 -1.2085 28 1 1.5878 2.4586 1.2241 29 1 2.5963 0.9238 2.4624 30 1 3.2011 -0.9282 4.1022 31 1 3.0636 -3.7832 4.2303 32 1 2.3353 -5.7052 2.9226 33 1 1.7718 -7.0709 1.8509 34 1 1.5108 -8.1534 -0.7448 35 1 -0.1100 -8.0417 -0.0178 36 1 -0.0684 -11.1453 0.6201 37 1 0.8600 -10.5797 -0.8349 38 1 1.6567 -11.2132 2.9289 39 1 1.1284 -12.7077 2.1192 40 1 3.0827 -13.0578 3.4477 41 1 3.2053 -9.5491 0.0147 42 1 3.2582 -9.6820 1.8260 43 1 1.0945 -3.1193 -0.2673 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16500644_13287722.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:02:17 Heat of formation + Delta-G solvation = -78.788833 kcal Electronic energy + Delta-G solvation = -28236.852856 eV Core-core repulsion = 23971.229526 eV Total energy + Delta-G solvation = -4265.623330 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 335.137 amu Computer time = 0.95 seconds Orbital eigenvalues (eV) -48.93610 -42.47686 -40.91464 -39.81584 -38.07322 -37.52418 -37.19177 -35.71829 -33.30495 -31.43573 -30.64682 -29.72601 -27.15170 -26.90935 -26.49201 -24.55940 -23.51017 -22.81867 -21.64358 -20.84260 -20.13047 -19.41013 -18.85489 -18.33119 -17.72195 -17.53873 -17.11148 -16.93308 -16.82771 -16.39746 -16.13427 -15.98190 -15.65437 -15.49085 -15.34844 -15.15490 -15.07773 -14.80973 -14.72271 -14.27002 -14.11191 -13.80251 -13.71197 -13.56453 -13.47166 -13.18201 -12.63348 -12.51727 -12.45744 -12.16388 -11.80661 -11.79212 -11.60696 -11.30841 -11.12945 -10.82627 -10.79013 -10.48229 -10.31492 -9.35572 -8.83216 -4.86341 -0.18272 0.17805 1.35569 1.50563 1.61857 1.78713 1.95476 2.02279 2.10713 2.85388 3.00324 3.11220 3.18388 3.25935 3.48624 3.52033 3.60406 3.70597 3.82028 3.89126 3.90775 4.11536 4.21210 4.35336 4.37538 4.42248 4.45274 4.49917 4.56482 4.58010 4.60561 4.66186 4.69782 4.79311 4.87005 4.92646 4.99056 5.06347 5.20737 5.24544 5.30109 5.32127 5.46912 5.56266 5.96260 6.36831 6.54915 6.61139 6.83938 7.07259 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.557 6.557 2 C -0.063 4.063 3 Si 0.788 3.212 4 C -0.215 4.215 5 C 0.082 3.918 6 N -0.571 5.571 7 C 0.112 3.888 8 C -0.125 4.125 9 C -0.068 4.068 10 C -0.180 4.180 11 C 0.562 3.438 12 O -0.584 6.584 13 N -0.713 5.713 14 C 0.112 3.888 15 C 0.080 3.920 16 F -0.194 7.194 17 C -0.135 4.135 18 C -0.116 4.116 19 H 0.093 0.907 20 C 0.083 3.917 21 O -0.593 6.593 22 C -0.142 4.142 23 C -0.018 4.018 24 C -0.127 4.127 25 H 0.384 0.616 26 H 0.101 0.899 27 H -0.311 1.311 28 H -0.259 1.259 29 H 0.210 0.790 30 H 0.439 0.561 31 H 0.161 0.839 32 H 0.154 0.846 33 H 0.413 0.587 34 H 0.095 0.905 35 H 0.071 0.929 36 H 0.090 0.910 37 H 0.125 0.875 38 H 0.056 0.944 39 H 0.057 0.943 40 H 0.397 0.603 41 H 0.114 0.886 42 H 0.081 0.919 43 H 0.110 0.890 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.339 0.671 7.264 9.040 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.365 6.365 2 C -0.171 4.171 3 Si 0.691 3.309 4 C -0.222 4.222 5 C -0.046 4.046 6 N -0.174 5.174 7 C 0.003 3.997 8 C -0.145 4.145 9 C -0.088 4.088 10 C -0.184 4.184 11 C 0.352 3.648 12 O -0.466 6.466 13 N -0.366 5.366 14 C -0.012 4.012 15 C 0.062 3.938 16 F -0.174 7.174 17 C -0.173 4.173 18 C -0.134 4.134 19 H 0.112 0.888 20 C 0.006 3.994 21 O -0.402 6.402 22 C -0.179 4.179 23 C -0.038 4.038 24 C -0.132 4.132 25 H 0.233 0.767 26 H 0.119 0.881 27 H -0.239 1.239 28 H -0.185 1.185 29 H 0.226 0.774 30 H 0.280 0.720 31 H 0.178 0.822 32 H 0.171 0.829 33 H 0.251 0.749 34 H 0.113 0.887 35 H 0.089 0.911 36 H 0.109 0.891 37 H 0.143 0.857 38 H 0.074 0.926 39 H 0.075 0.925 40 H 0.247 0.753 41 H 0.132 0.868 42 H 0.100 0.900 43 H 0.128 0.872 Dipole moment (debyes) X Y Z Total from point charges 5.120 1.543 5.558 7.713 hybrid contribution -1.415 -0.576 1.457 2.111 sum 3.705 0.967 7.015 7.992 Atomic orbital electron populations 1.86598 1.19387 1.80624 1.49908 1.24778 0.82730 1.12457 0.97112 0.94081 0.89606 0.69982 0.77218 1.20760 1.11143 0.91380 0.98963 1.22187 0.98439 0.95717 0.88248 1.41766 1.53787 1.03134 1.18726 1.18608 0.99676 0.87801 0.93647 1.20037 1.04310 0.88031 1.02101 1.20838 0.96124 1.00048 0.91811 1.19537 1.09275 0.92233 0.97390 1.18457 0.77327 0.83782 0.85239 1.90768 1.46778 1.86731 1.22290 1.45630 1.64174 1.04894 1.21859 1.21859 1.01545 0.82603 0.95184 1.22242 0.97216 0.95432 0.78942 1.92827 1.88810 1.97208 1.38558 1.23593 0.98667 0.92515 1.02479 1.22290 0.97737 0.96303 0.97108 0.88828 1.22118 0.86382 0.95864 0.95083 1.86408 1.36433 1.73977 1.43360 1.23659 0.94022 0.95245 1.04983 1.20592 0.94204 0.90545 0.98439 1.19189 1.05087 0.93569 0.95326 0.76701 0.88137 1.23940 1.18456 0.77360 0.71996 0.82153 0.82880 0.74906 0.88651 0.91075 0.89129 0.85683 0.92622 0.92502 0.75278 0.86799 0.89980 0.87198 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -3.82 12.88 -148.98 -1.92 -5.74 16 2 C -0.06 -0.16 3.06 71.24 0.22 0.06 16 3 Si 0.79 -2.43 30.82 68.60 2.11 -0.31 16 4 C -0.22 -0.39 5.58 -18.61 -0.10 -0.49 16 5 C 0.08 -0.41 10.43 82.98 0.87 0.46 16 6 N -0.57 3.31 6.05 -187.48 -1.13 2.17 16 7 C 0.11 0.06 7.27 39.19 0.28 0.34 16 8 C -0.12 0.27 10.00 22.09 0.22 0.49 16 9 C -0.07 0.00 9.46 22.30 0.21 0.21 16 10 C -0.18 -1.30 5.87 -20.09 -0.12 -1.42 16 11 C 0.56 5.54 7.76 86.73 0.67 6.22 16 12 O -0.58 -10.72 16.33 -3.95 -0.06 -10.79 16 13 N -0.71 -1.94 5.42 -466.17 -2.53 -4.46 16 14 C 0.11 0.13 5.35 86.38 0.46 0.59 16 15 C 0.08 -0.15 1.63 -10.27 -0.02 -0.16 16 16 F -0.19 -0.28 15.08 44.97 0.68 0.40 16 17 C -0.13 0.55 7.13 31.12 0.22 0.78 16 18 C -0.12 0.24 4.19 -10.27 -0.04 0.19 16 19 H 0.09 -0.12 8.14 -2.38 -0.02 -0.14 16 20 C 0.08 -0.09 6.66 71.98 0.48 0.39 16 21 O -0.59 -0.62 13.66 -148.98 -2.04 -2.65 16 22 C -0.14 0.40 7.07 31.12 0.22 0.62 16 23 C -0.02 -0.19 9.64 22.74 0.22 0.03 16 24 C -0.13 -0.78 6.34 -20.21 -0.13 -0.91 16 25 H 0.38 -0.10 8.70 -74.06 -0.64 -0.74 16 26 H 0.10 0.44 7.96 -2.39 -0.02 0.42 16 27 H -0.31 -1.92 7.11 99.48 0.71 -1.22 16 28 H -0.26 0.81 7.00 99.48 0.70 1.50 16 29 H 0.21 -2.54 6.27 -2.91 -0.02 -2.56 16 30 H 0.44 -5.61 8.96 -92.71 -0.83 -6.45 16 31 H 0.16 -1.43 8.06 -2.91 -0.02 -1.45 16 32 H 0.15 -0.94 6.36 -2.91 -0.02 -0.96 16 33 H 0.41 -0.84 6.23 -92.71 -0.58 -1.41 16 34 H 0.10 0.05 7.98 -2.39 -0.02 0.03 16 35 H 0.07 0.25 8.14 -2.39 -0.02 0.23 16 36 H 0.09 -0.39 8.10 -2.39 -0.02 -0.41 16 37 H 0.12 -0.88 8.10 -2.39 -0.02 -0.89 16 38 H 0.06 -0.04 6.32 -2.39 -0.02 -0.06 16 39 H 0.06 -0.15 8.14 -2.39 -0.02 -0.17 16 40 H 0.40 -2.83 9.12 -74.06 -0.68 -3.50 16 41 H 0.11 -0.53 7.99 -2.39 -0.02 -0.55 16 42 H 0.08 -0.15 8.10 -2.39 -0.02 -0.17 16 43 H 0.11 1.62 7.64 -2.91 -0.02 1.59 16 Total: 0.00 -28.07 362.14 -2.82 -30.89 By element: Atomic # 1 Polarization: -15.31 SS G_CDS: -1.60 Total: -16.91 kcal Atomic # 6 Polarization: 3.73 SS G_CDS: 3.67 Total: 7.40 kcal Atomic # 7 Polarization: 1.37 SS G_CDS: -3.66 Total: -2.29 kcal Atomic # 8 Polarization: -15.16 SS G_CDS: -4.02 Total: -19.18 kcal Atomic # 9 Polarization: -0.28 SS G_CDS: 0.68 Total: 0.40 kcal Atomic # 14 Polarization: -2.43 SS G_CDS: 2.11 Total: -0.31 kcal Total: -28.07 -2.82 -30.89 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16500644_13287722.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -47.897 kcal (2) G-P(sol) polarization free energy of solvation -28.073 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -75.970 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.819 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -30.892 kcal (6) G-S(sol) free energy of system = (1) + (5) -78.789 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.95 seconds