Wall clock time and date at job start Sun Mar 7 2021 09:02:21 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86305 * 109.46645 * 2 1 4 4 C 1.50699 * 109.47152 * 119.99802 * 2 1 3 5 5 C 1.38576 * 120.32770 * 65.00219 * 4 2 1 6 6 C 1.38633 * 118.49146 * 180.02562 * 5 4 2 7 7 C 1.39263 * 119.05910 * 359.97438 * 6 5 4 8 8 C 1.48164 * 119.72329 * 180.02562 * 7 6 5 9 9 O 1.21520 * 119.99790 * 0.02562 * 8 7 6 10 10 N 1.34780 * 120.00276 * 180.02562 * 8 7 6 11 11 C 1.46499 * 119.99704 * 180.02562 * 10 8 7 12 12 C 1.53001 * 109.46838 * 180.02562 * 11 10 8 13 13 F 1.39902 * 112.85244 * 50.32822 * 12 11 10 14 14 C 1.53778 * 113.61572 * 181.52921 * 12 11 10 15 15 C 1.53781 * 87.08139 * 139.97853 * 14 12 11 16 16 H 1.09003 * 113.61279 * 219.93334 * 15 14 12 17 17 C 1.53002 * 113.61665 * 89.11725 * 15 14 12 18 18 O 1.42897 * 109.47361 * 174.99894 * 17 15 14 19 19 C 1.53784 * 113.61392 * 279.13675 * 12 11 10 20 20 N 1.32749 * 120.55692 * 359.97438 * 7 6 5 21 21 C 1.31499 * 121.64125 * 359.74540 * 20 7 6 22 22 H 0.96700 * 114.00311 * 60.00382 * 1 2 3 23 23 H 1.08997 * 109.47332 * 240.00042 * 2 1 3 24 24 H 1.48497 * 110.00233 * 59.99845 * 3 2 1 25 25 H 1.48492 * 109.99800 * 181.32238 * 3 2 1 26 26 H 1.08006 * 120.75643 * 359.97438 * 5 4 2 27 27 H 1.08000 * 120.46809 * 179.97438 * 6 5 4 28 28 H 0.96990 * 119.99776 * 0.02562 * 10 8 7 29 29 H 1.09001 * 109.47224 * 299.99533 * 11 10 8 30 30 H 1.08994 * 109.47608 * 60.00229 * 11 10 8 31 31 H 1.09000 * 113.61662 * 254.52752 * 14 12 11 32 32 H 1.08993 * 113.61432 * 25.34801 * 14 12 11 33 33 H 1.08998 * 109.46768 * 295.00041 * 17 15 14 34 34 H 1.09000 * 109.47311 * 54.99895 * 17 15 14 35 35 H 0.96696 * 113.99959 * 179.97438 * 18 17 15 36 36 H 1.09006 * 113.60972 * 334.56579 * 19 12 11 37 37 H 1.08999 * 113.61820 * 105.46634 * 19 12 11 38 38 H 1.08001 * 119.55006 * 180.26512 * 21 20 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7566 0.0000 4 6 1.9314 -0.7104 1.2305 5 6 1.6881 -2.0633 1.4057 6 6 2.1672 -2.6783 2.5521 7 6 2.8729 -1.9194 3.4823 8 6 3.3921 -2.5618 4.7123 9 8 3.2018 -3.7463 4.9058 10 7 4.0754 -1.8326 5.6166 11 6 4.5892 -2.4680 6.8325 12 6 5.3199 -1.4266 7.6825 13 9 4.5640 -0.2679 7.8907 14 6 5.9324 -2.0023 8.9702 15 6 7.1480 -1.0993 8.7022 16 1 8.1032 -1.5766 8.9214 17 6 7.0246 0.2945 9.3210 18 8 8.2422 1.0148 9.1194 19 6 6.7578 -1.1480 7.2137 20 7 3.0853 -0.6254 3.2758 21 6 2.6469 -0.0182 2.1949 22 1 -0.3934 0.4416 -0.7651 23 1 1.7924 -0.5138 -0.8899 24 1 1.5613 2.4680 1.2084 25 1 3.5344 1.7705 -0.0322 26 1 1.1370 -2.6257 0.6664 27 1 1.9955 -3.7311 2.7213 28 1 4.2270 -0.8871 5.4624 29 1 3.7593 -2.8847 7.4033 30 1 5.2804 -3.2659 6.5613 31 1 5.3816 -1.7365 9.8725 32 1 6.1560 -3.0673 8.9092 33 1 6.2024 0.8308 8.8471 34 1 6.8299 0.2018 10.3894 35 1 8.2354 1.9093 9.4865 36 1 7.2089 -1.9788 6.6711 37 1 6.8724 -0.1935 6.6999 38 1 2.8426 1.0352 2.0592 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16500644_13287726.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:02:21 Heat of formation + Delta-G solvation = -94.099767 kcal Electronic energy + Delta-G solvation = -23640.708328 eV Core-core repulsion = 19786.410966 eV Total energy + Delta-G solvation = -3854.297362 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 297.121 amu Computer time = 0.62 seconds Orbital eigenvalues (eV) -48.92228 -41.85844 -40.36707 -39.74843 -37.93139 -37.22779 -35.67078 -33.97560 -33.07042 -30.44109 -28.07326 -27.18889 -26.61271 -25.08341 -23.75586 -22.83113 -21.78582 -20.28857 -19.49603 -18.69770 -18.45230 -18.22176 -17.36331 -17.16741 -16.85600 -16.74078 -16.36163 -16.12089 -15.90365 -15.48312 -15.43259 -15.31744 -14.91929 -14.78136 -14.35742 -14.15083 -14.02707 -13.96078 -13.66772 -13.53725 -13.30831 -12.57380 -12.53620 -12.17734 -11.88168 -11.67916 -11.39378 -11.38816 -11.08953 -10.87459 -10.77029 -10.53996 -10.32716 -10.12586 -5.14040 -0.59946 0.02596 1.07615 1.48319 1.60433 1.79736 1.88376 2.63394 2.84659 2.88958 3.01858 3.12331 3.16954 3.19353 3.38916 3.49875 3.62746 3.71715 3.80253 3.85136 4.12476 4.15137 4.21182 4.30674 4.36934 4.42805 4.46968 4.48789 4.52551 4.58136 4.74462 4.80473 4.83595 4.92582 4.99804 5.15379 5.26340 5.31974 6.24718 6.41991 6.56971 6.63123 7.06590 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.544 6.544 2 C -0.072 4.072 3 Si 0.684 3.316 4 C -0.104 4.104 5 C -0.050 4.050 6 C -0.105 4.105 7 C 0.079 3.921 8 C 0.575 3.425 9 O -0.527 6.527 10 N -0.709 5.709 11 C 0.111 3.889 12 C 0.077 3.923 13 F -0.183 7.183 14 C -0.140 4.140 15 C -0.110 4.110 16 H 0.097 0.903 17 C 0.084 3.916 18 O -0.573 6.573 19 C -0.147 4.147 20 N -0.451 5.451 21 C 0.099 3.901 22 H 0.387 0.613 23 H 0.082 0.918 24 H -0.245 1.245 25 H -0.250 1.250 26 H 0.150 0.850 27 H 0.155 0.845 28 H 0.415 0.585 29 H 0.084 0.916 30 H 0.093 0.907 31 H 0.088 0.912 32 H 0.111 0.889 33 H 0.058 0.942 34 H 0.051 0.949 35 H 0.383 0.617 36 H 0.104 0.896 37 H 0.086 0.914 38 H 0.156 0.844 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.198 2.611 -3.678 4.515 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.351 6.351 2 C -0.183 4.183 3 Si 0.585 3.415 4 C -0.106 4.106 5 C -0.076 4.076 6 C -0.126 4.126 7 C -0.059 4.059 8 C 0.360 3.640 9 O -0.403 6.403 10 N -0.361 5.361 11 C -0.013 4.013 12 C 0.058 3.942 13 F -0.163 7.163 14 C -0.178 4.178 15 C -0.129 4.129 16 H 0.115 0.885 17 C 0.007 3.993 18 O -0.379 6.379 19 C -0.184 4.184 20 N -0.162 5.162 21 C -0.060 4.060 22 H 0.235 0.765 23 H 0.100 0.900 24 H -0.170 1.170 25 H -0.174 1.174 26 H 0.168 0.832 27 H 0.173 0.827 28 H 0.252 0.748 29 H 0.102 0.898 30 H 0.111 0.889 31 H 0.107 0.893 32 H 0.129 0.871 33 H 0.076 0.924 34 H 0.069 0.931 35 H 0.230 0.770 36 H 0.122 0.878 37 H 0.105 0.895 38 H 0.173 0.827 Dipole moment (debyes) X Y Z Total from point charges 0.874 1.953 -2.153 3.035 hybrid contribution -0.676 0.106 -0.261 0.732 sum 0.198 2.059 -2.414 3.179 Atomic orbital electron populations 1.86487 1.16648 1.81947 1.49999 1.24630 0.86212 1.10802 0.96662 0.94942 0.81082 0.77712 0.87798 1.20648 0.98436 0.95158 0.96332 1.21551 0.95560 0.93629 0.96878 1.22229 0.95095 1.02361 0.92876 1.21112 0.98828 0.90183 0.95803 1.17796 0.78094 0.85873 0.82216 1.90823 1.57855 1.14684 1.76917 1.45651 1.55584 1.14340 1.20507 1.21884 0.99491 0.94896 0.85044 1.22225 0.90615 0.83182 0.98130 1.92857 1.77511 1.50264 1.95695 1.23556 0.96218 1.01161 0.96891 1.22282 0.99756 0.95178 0.95641 0.88498 1.22072 0.86834 0.91496 0.98928 1.86444 1.37136 1.31475 1.82831 1.23694 0.92895 1.04470 0.97376 1.67505 1.18362 1.09595 1.20775 1.22452 0.95151 0.99438 0.88992 0.76485 0.90006 1.16989 1.17411 0.83214 0.82694 0.74814 0.89780 0.88870 0.89315 0.87089 0.92365 0.93122 0.76992 0.87763 0.89528 0.82728 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.70 12.82 -35.23 -0.45 0.25 16 2 C -0.07 0.12 2.81 36.01 0.10 0.22 16 3 Si 0.68 -1.68 29.87 -169.99 -5.08 -6.75 16 4 C -0.10 -0.13 5.40 -104.36 -0.56 -0.69 16 5 C -0.05 -0.05 9.83 -39.31 -0.39 -0.43 16 6 C -0.10 -0.22 9.63 -39.05 -0.38 -0.60 16 7 C 0.08 0.28 6.75 -83.01 -0.56 -0.28 16 8 C 0.58 2.36 7.81 -12.18 -0.10 2.26 16 9 O -0.53 -3.37 16.32 5.35 0.09 -3.28 16 10 N -0.71 -1.48 5.46 -61.15 -0.33 -1.82 16 11 C 0.11 0.05 5.35 -4.04 -0.02 0.03 16 12 C 0.08 -0.02 1.63 -89.81 -0.15 -0.17 16 13 F -0.18 -0.34 15.08 2.25 0.03 -0.30 16 14 C -0.14 0.23 7.13 -25.92 -0.18 0.05 16 15 C -0.11 0.05 4.20 -89.72 -0.38 -0.33 16 16 H 0.10 -0.02 8.14 -51.93 -0.42 -0.45 16 17 C 0.08 0.01 6.65 37.16 0.25 0.26 16 18 O -0.57 -0.65 13.66 -35.23 -0.48 -1.13 16 19 C -0.15 0.08 7.08 -25.83 -0.18 -0.10 16 20 N -0.45 -1.56 9.54 -9.80 -0.09 -1.66 16 21 C 0.10 0.23 9.84 -17.56 -0.17 0.06 16 22 H 0.39 -2.44 8.74 45.56 0.40 -2.04 16 23 H 0.08 -0.29 7.96 -51.93 -0.41 -0.70 16 24 H -0.25 -0.17 7.06 56.52 0.40 0.23 16 25 H -0.25 0.01 7.11 56.52 0.40 0.42 16 26 H 0.15 -0.19 8.06 -52.48 -0.42 -0.61 16 27 H 0.16 0.19 7.64 -52.49 -0.40 -0.21 16 28 H 0.42 0.71 7.56 -40.82 -0.31 0.40 16 29 H 0.08 0.07 8.14 -51.93 -0.42 -0.35 16 30 H 0.09 -0.03 7.98 -51.93 -0.41 -0.45 16 31 H 0.09 -0.16 8.10 -51.93 -0.42 -0.58 16 32 H 0.11 -0.36 8.10 -51.93 -0.42 -0.78 16 33 H 0.06 0.03 6.31 -51.93 -0.33 -0.30 16 34 H 0.05 -0.04 8.14 -51.93 -0.42 -0.46 16 35 H 0.38 -1.13 9.12 45.56 0.42 -0.71 16 36 H 0.10 -0.16 7.99 -51.93 -0.41 -0.58 16 37 H 0.09 0.04 8.10 -51.93 -0.42 -0.38 16 38 H 0.16 0.18 4.89 -52.49 -0.26 -0.08 16 LS Contribution 326.00 15.07 4.91 4.91 Total: 0.00 -9.15 326.00 -8.00 -17.15 By element: Atomic # 1 Polarization: -3.77 SS G_CDS: -3.88 Total: -7.64 kcal Atomic # 6 Polarization: 2.99 SS G_CDS: -2.72 Total: 0.28 kcal Atomic # 7 Polarization: -3.05 SS G_CDS: -0.43 Total: -3.47 kcal Atomic # 8 Polarization: -3.32 SS G_CDS: -0.85 Total: -4.16 kcal Atomic # 9 Polarization: -0.34 SS G_CDS: 0.03 Total: -0.30 kcal Atomic # 14 Polarization: -1.68 SS G_CDS: -5.08 Total: -6.75 kcal Total LS contribution 4.91 Total: 4.91 kcal Total: -9.15 -8.00 -17.15 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16500644_13287726.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -76.950 kcal (2) G-P(sol) polarization free energy of solvation -9.152 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -86.102 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.998 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.149 kcal (6) G-S(sol) free energy of system = (1) + (5) -94.100 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.62 seconds