Wall clock time and date at job start Sun Mar 7 2021 09:02:30 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42895 * 1 3 3 Si 1.86300 * 109.47204 * 2 1 4 4 C 1.50698 * 109.47265 * 119.99878 * 2 1 3 5 5 C 1.34847 * 125.90330 * 217.29355 * 4 2 1 6 6 C 1.40939 * 107.46984 * 179.97438 * 5 4 2 7 7 C 1.34850 * 107.47037 * 0.02562 * 6 5 4 8 8 N 1.36573 * 125.89522 * 36.98285 * 4 2 1 9 9 C 1.40196 * 125.67101 * 0.02562 * 8 4 2 10 10 C 1.38828 * 120.06158 * 235.49872 * 9 8 4 11 11 C 1.38125 * 119.92909 * 179.69936 * 10 9 8 12 12 C 1.38278 * 120.06573 * 0.59856 * 11 10 9 13 13 C 1.50704 * 119.93361 * 179.69785 * 12 11 10 14 14 C 1.50698 * 109.47451 * 269.97584 * 13 12 11 15 15 O 1.21284 * 119.99716 * 0.02562 * 14 13 12 16 16 N 1.34769 * 120.00128 * 180.02562 * 14 13 12 17 17 C 1.46504 * 119.99944 * 180.02562 * 16 14 13 18 18 C 1.52997 * 109.47185 * 179.97438 * 17 16 14 19 19 F 1.39901 * 112.85206 * 314.66357 * 18 17 16 20 20 C 1.53788 * 113.61661 * 85.85944 * 18 17 16 21 21 C 1.54048 * 86.98660 * 89.16256 * 20 18 17 22 22 H 1.08997 * 113.61163 * 270.88667 * 21 20 18 23 23 C 1.52998 * 113.69656 * 139.99216 * 21 20 18 24 24 O 1.42896 * 109.47132 * 87.46868 * 23 21 20 25 25 C 1.53778 * 113.61909 * 183.46551 * 18 17 16 26 26 C 1.38283 * 120.13341 * 359.67858 * 12 11 10 27 27 C 1.38119 * 120.06027 * 0.02562 * 26 12 11 28 28 H 0.96700 * 114.00218 * 305.50958 * 1 2 3 29 29 H 1.09006 * 109.47392 * 239.99858 * 2 1 3 30 30 H 1.48505 * 109.99918 * 299.99728 * 3 2 1 31 31 H 1.48493 * 110.00311 * 61.31947 * 3 2 1 32 32 H 1.08007 * 126.26459 * 359.94108 * 5 4 2 33 33 H 1.08005 * 126.26615 * 180.02562 * 6 5 4 34 34 H 1.07999 * 125.89708 * 180.02562 * 7 6 5 35 35 H 1.07992 * 120.04012 * 359.97438 * 10 9 8 36 36 H 1.08001 * 119.96912 * 180.30047 * 11 10 9 37 37 H 1.08997 * 109.47300 * 29.98556 * 13 12 11 38 38 H 1.09002 * 109.46726 * 149.98039 * 13 12 11 39 39 H 0.96996 * 120.00024 * 359.97438 * 16 14 13 40 40 H 1.09004 * 109.46835 * 299.99447 * 17 16 14 41 41 H 1.08996 * 109.47811 * 59.99670 * 17 16 14 42 42 H 1.08998 * 113.61456 * 203.67097 * 20 18 17 43 43 H 1.09000 * 113.61236 * 334.56440 * 20 18 17 44 44 H 1.08999 * 109.46907 * 207.46774 * 23 21 20 45 45 H 1.09003 * 109.47048 * 327.46778 * 23 21 20 46 46 H 0.96703 * 113.99906 * 180.02562 * 24 23 21 47 47 H 1.09005 * 113.61267 * 25.43133 * 25 18 17 48 48 H 1.08992 * 113.61671 * 156.33090 * 25 18 17 49 49 H 1.07994 * 119.97067 * 180.02562 * 26 12 11 50 50 H 1.07996 * 120.03176 * 180.02562 * 27 26 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 3.0142 -0.3651 1.9561 6 6 3.1253 -1.2880 3.0156 7 6 2.1066 -2.1637 2.8981 8 7 1.3650 -1.8115 1.8066 9 6 0.2159 -2.4729 1.3511 10 6 -0.8631 -2.6602 2.2044 11 6 -1.9963 -3.3066 1.7509 12 6 -2.0520 -3.7779 0.4521 13 6 -3.2873 -4.4888 -0.0376 14 6 -3.1541 -5.9667 0.2255 15 8 -2.1545 -6.3999 0.7586 16 7 -4.1455 -6.8068 -0.1317 17 6 -4.0161 -8.2434 0.1246 18 6 -5.2702 -8.9652 -0.3726 19 9 -6.4532 -8.3185 0.0008 20 6 -5.2161 -9.3379 -1.8637 21 6 -4.5629 -10.6624 -1.4254 22 1 -3.4761 -10.6122 -1.3589 23 6 -5.0545 -11.8799 -2.2108 24 8 -4.2620 -12.0383 -3.3892 25 6 -5.2721 -10.4737 -0.0739 26 6 -0.9767 -3.5979 -0.3985 27 6 0.1568 -2.9468 0.0476 28 1 -0.3933 0.5131 0.7191 29 1 1.7924 -0.5139 -0.8900 30 1 1.5615 2.4679 -1.2086 31 1 1.5879 2.4586 1.2242 32 1 3.6756 0.4661 1.7609 33 1 3.8869 -1.2929 3.7813 34 1 1.9083 -2.9965 3.5566 35 1 -0.8181 -2.2970 3.2204 36 1 -2.8379 -3.4484 2.4127 37 1 -4.1608 -4.1034 0.4882 38 1 -3.4037 -4.3194 -1.1081 39 1 -4.9450 -6.4602 -0.5577 40 1 -3.1423 -8.6289 -0.4007 41 1 -3.9004 -8.4127 1.1951 42 1 -6.1987 -9.4649 -2.3179 43 1 -4.5573 -8.6975 -2.4502 44 1 -4.9661 -12.7720 -1.5908 45 1 -6.0977 -11.7343 -2.4913 46 1 -4.5184 -12.7927 -3.9372 47 1 -4.6584 -10.7498 0.7835 48 1 -6.2700 -10.9107 -0.0397 49 1 -1.0232 -3.9666 -1.4125 50 1 0.9962 -2.8061 -0.6172 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16500644_13287746.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:02:30 Heat of formation + Delta-G solvation = -55.293253 kcal Electronic energy + Delta-G solvation = -33394.956223 eV Core-core repulsion = 28691.050359 eV Total energy + Delta-G solvation = -4703.905864 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 375.168 amu Computer time = 1.39 seconds Orbital eigenvalues (eV) -48.79618 -42.57107 -41.09117 -40.25160 -39.47999 -37.74348 -37.36011 -35.52384 -34.79806 -32.08571 -31.98005 -30.96072 -30.14410 -28.15496 -27.24117 -26.57167 -25.96472 -23.89239 -23.30596 -22.91958 -21.53113 -21.30389 -20.55001 -20.36400 -19.19969 -18.43856 -18.35961 -17.82980 -17.46843 -17.18420 -16.94449 -16.78850 -16.57544 -16.21654 -15.88242 -15.83156 -15.73484 -15.68657 -15.19147 -15.05990 -14.76949 -14.63660 -14.46623 -14.34129 -14.27365 -14.07989 -13.96118 -13.80331 -13.59060 -13.24506 -13.11451 -13.00302 -12.93056 -12.63415 -12.47256 -12.26108 -12.21986 -12.05795 -11.77322 -11.67285 -11.49521 -11.02950 -10.97847 -10.84768 -10.23293 -10.14950 -9.91249 -9.12569 -8.94868 -4.90553 0.08754 0.43165 1.12383 1.45645 1.59190 1.69116 1.89262 1.95290 2.10405 2.20574 2.74320 2.83482 3.00145 3.10028 3.11488 3.30537 3.31160 3.56585 3.73573 3.74946 3.77081 3.88134 3.95028 4.09906 4.13613 4.18400 4.23822 4.25742 4.31481 4.37124 4.42570 4.43356 4.45875 4.51313 4.52396 4.56066 4.57727 4.64823 4.69749 4.73129 4.86314 4.89196 5.01167 5.15376 5.23758 5.26937 5.29620 5.34941 5.46989 5.54467 5.83387 6.03469 6.28332 6.34072 6.42665 6.54923 6.62200 7.13716 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.526 6.526 2 C -0.052 4.052 3 Si 0.710 3.290 4 C -0.013 4.013 5 C -0.186 4.186 6 C -0.190 4.190 7 C -0.005 4.005 8 N -0.391 5.391 9 C 0.131 3.869 10 C -0.116 4.116 11 C -0.091 4.091 12 C -0.063 4.063 13 C -0.102 4.102 14 C 0.516 3.484 15 O -0.526 6.526 16 N -0.731 5.731 17 C 0.121 3.879 18 C 0.079 3.921 19 F -0.196 7.196 20 C -0.145 4.145 21 C -0.109 4.109 22 H 0.107 0.893 23 C 0.087 3.913 24 O -0.573 6.573 25 C -0.142 4.142 26 C -0.088 4.088 27 C -0.092 4.092 28 H 0.373 0.627 29 H 0.116 0.884 30 H -0.256 1.256 31 H -0.257 1.257 32 H 0.147 0.853 33 H 0.142 0.858 34 H 0.163 0.837 35 H 0.127 0.873 36 H 0.128 0.872 37 H 0.107 0.893 38 H 0.107 0.893 39 H 0.406 0.594 40 H 0.091 0.909 41 H 0.083 0.917 42 H 0.098 0.902 43 H 0.085 0.915 44 H 0.051 0.949 45 H 0.050 0.950 46 H 0.383 0.617 47 H 0.089 0.911 48 H 0.103 0.897 49 H 0.127 0.873 50 H 0.125 0.875 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.618 -2.042 -1.819 3.786 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.331 6.331 2 C -0.161 4.161 3 Si 0.609 3.391 4 C -0.122 4.122 5 C -0.210 4.210 6 C -0.214 4.214 7 C -0.132 4.132 8 N -0.064 5.064 9 C 0.041 3.959 10 C -0.135 4.135 11 C -0.109 4.109 12 C -0.064 4.064 13 C -0.142 4.142 14 C 0.303 3.697 15 O -0.401 6.401 16 N -0.384 5.384 17 C -0.004 4.004 18 C 0.060 3.940 19 F -0.176 7.176 20 C -0.183 4.183 21 C -0.127 4.127 22 H 0.125 0.875 23 C 0.009 3.991 24 O -0.379 6.379 25 C -0.180 4.180 26 C -0.107 4.107 27 C -0.111 4.111 28 H 0.220 0.780 29 H 0.133 0.867 30 H -0.181 1.181 31 H -0.182 1.182 32 H 0.165 0.835 33 H 0.160 0.840 34 H 0.181 0.819 35 H 0.145 0.855 36 H 0.145 0.855 37 H 0.125 0.875 38 H 0.125 0.875 39 H 0.240 0.760 40 H 0.109 0.891 41 H 0.101 0.899 42 H 0.117 0.883 43 H 0.103 0.897 44 H 0.070 0.930 45 H 0.068 0.932 46 H 0.230 0.770 47 H 0.108 0.892 48 H 0.121 0.879 49 H 0.145 0.855 50 H 0.143 0.857 Dipole moment (debyes) X Y Z Total from point charges -2.021 -1.491 -1.795 3.087 hybrid contribution -1.869 -0.671 0.269 2.004 sum -3.890 -2.162 -1.526 4.705 Atomic orbital electron populations 1.86614 1.17503 1.74348 1.54653 1.24740 0.84026 1.10998 0.96381 0.94456 0.91644 0.72655 0.80346 1.21001 0.98581 0.92511 1.00114 1.20673 0.99306 1.03160 0.97894 1.20927 1.00995 0.97802 1.01720 1.22031 0.95262 1.03104 0.92853 1.41428 1.20174 1.22092 1.22753 1.17605 0.86246 0.97901 0.94159 1.20988 0.92109 1.00655 0.99783 1.20802 0.97725 0.97460 0.94953 1.19262 0.94833 0.98119 0.94165 1.20672 0.98102 0.91171 1.04259 1.20569 0.82670 0.88380 0.78109 1.90769 1.29506 1.78352 1.41506 1.45829 1.21819 1.07019 1.63775 1.21591 0.95891 0.80471 1.02402 1.22586 0.81865 0.92197 0.97315 1.92865 1.48483 1.83461 1.92771 1.23773 1.02922 0.97317 0.94298 1.22432 1.01333 0.94164 0.94763 0.87516 1.22104 0.93680 0.96890 0.86441 1.86481 1.60431 1.54076 1.36908 1.23600 1.03115 0.93019 0.98246 1.20812 0.92192 0.97953 0.99704 1.20896 0.98657 0.97132 0.94436 0.77974 0.86673 1.18102 1.18156 0.83529 0.83987 0.81934 0.85511 0.85456 0.87461 0.87466 0.75951 0.89103 0.89902 0.88317 0.89675 0.93043 0.93215 0.76985 0.89235 0.87882 0.85497 0.85736 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -1.00 10.87 -35.23 -0.38 -1.38 16 2 C -0.05 -0.04 2.50 36.00 0.09 0.05 16 3 Si 0.71 -0.26 30.82 -169.99 -5.24 -5.50 16 4 C -0.01 -0.03 6.12 -81.68 -0.50 -0.53 16 5 C -0.19 -0.32 9.40 -39.76 -0.37 -0.70 16 6 C -0.19 -0.41 10.86 -39.76 -0.43 -0.84 16 7 C 0.00 -0.01 11.21 -16.64 -0.19 -0.20 16 8 N -0.39 -1.21 2.84 -56.73 -0.16 -1.37 16 9 C 0.13 0.40 4.67 -83.60 -0.39 0.01 16 10 C -0.12 -0.26 9.76 -39.40 -0.38 -0.64 16 11 C -0.09 -0.13 9.69 -39.61 -0.38 -0.52 16 12 C -0.06 -0.08 4.38 -104.59 -0.46 -0.54 16 13 C -0.10 0.13 5.83 -29.03 -0.17 -0.04 16 14 C 0.52 0.63 7.82 -10.99 -0.09 0.54 16 15 O -0.53 -2.90 16.03 5.55 0.09 -2.81 16 16 N -0.73 0.56 5.45 -60.29 -0.33 0.23 16 17 C 0.12 -0.07 5.26 -4.04 -0.02 -0.09 16 18 C 0.08 -0.11 1.88 -89.81 -0.17 -0.27 16 19 F -0.20 -0.12 16.67 2.25 0.04 -0.08 16 20 C -0.15 0.25 7.09 -25.77 -0.18 0.07 16 21 C -0.11 0.19 3.66 -89.67 -0.33 -0.14 16 22 H 0.11 -0.12 7.69 -51.93 -0.40 -0.52 16 23 C 0.09 -0.16 6.89 37.16 0.26 0.10 16 24 O -0.57 0.13 13.66 -35.23 -0.48 -0.35 16 25 C -0.14 0.33 7.13 -25.92 -0.18 0.14 16 26 C -0.09 -0.16 9.69 -39.61 -0.38 -0.55 16 27 C -0.09 -0.26 8.49 -39.41 -0.33 -0.59 16 28 H 0.37 0.01 8.60 45.56 0.39 0.41 16 29 H 0.12 0.02 7.96 -51.93 -0.41 -0.39 16 30 H -0.26 -0.61 7.11 56.52 0.40 -0.21 16 31 H -0.26 -0.56 7.11 56.52 0.40 -0.16 16 32 H 0.15 -0.11 6.62 -52.48 -0.35 -0.46 16 33 H 0.14 0.06 8.06 -52.48 -0.42 -0.36 16 34 H 0.16 0.17 8.06 -52.49 -0.42 -0.26 16 35 H 0.13 0.15 8.06 -52.49 -0.42 -0.27 16 36 H 0.13 -0.04 8.06 -52.49 -0.42 -0.46 16 37 H 0.11 -0.35 8.08 -51.93 -0.42 -0.77 16 38 H 0.11 -0.35 8.08 -51.93 -0.42 -0.77 16 39 H 0.41 -1.08 8.08 -40.82 -0.33 -1.41 16 40 H 0.09 -0.03 7.37 -51.93 -0.38 -0.41 16 41 H 0.08 0.02 8.14 -51.93 -0.42 -0.41 16 42 H 0.10 -0.18 7.91 -51.93 -0.41 -0.59 16 43 H 0.08 -0.13 8.10 -51.93 -0.42 -0.55 16 44 H 0.05 -0.14 8.14 -51.93 -0.42 -0.56 16 45 H 0.05 -0.13 7.85 -51.93 -0.41 -0.54 16 46 H 0.38 -1.64 9.12 45.56 0.42 -1.23 16 47 H 0.09 -0.26 8.10 -51.93 -0.42 -0.68 16 48 H 0.10 -0.28 8.10 -51.93 -0.42 -0.70 16 49 H 0.13 0.02 8.06 -52.49 -0.42 -0.40 16 50 H 0.12 0.30 8.06 -52.49 -0.42 -0.13 16 LS Contribution 419.19 15.07 6.32 6.32 Total: 0.00 -10.19 419.19 -11.34 -21.52 By element: Atomic # 1 Polarization: -5.26 SS G_CDS: -6.57 Total: -11.83 kcal Atomic # 6 Polarization: -0.13 SS G_CDS: -4.62 Total: -4.75 kcal Atomic # 7 Polarization: -0.66 SS G_CDS: -0.49 Total: -1.15 kcal Atomic # 8 Polarization: -3.76 SS G_CDS: -0.78 Total: -4.54 kcal Atomic # 9 Polarization: -0.12 SS G_CDS: 0.04 Total: -0.08 kcal Atomic # 14 Polarization: -0.26 SS G_CDS: -5.24 Total: -5.50 kcal Total LS contribution 6.32 Total: 6.32 kcal Total: -10.19 -11.34 -21.52 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16500644_13287746.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -33.770 kcal (2) G-P(sol) polarization free energy of solvation -10.186 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -43.956 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.337 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.523 kcal (6) G-S(sol) free energy of system = (1) + (5) -55.293 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.39 seconds