Wall clock time and date at job start Sun Mar 7 2021 09:02:43 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86298 * 109.46997 * 2 1 4 4 C 1.50699 * 109.46830 * 240.00466 * 2 1 3 5 5 C 1.38503 * 119.80771 * 119.99642 * 4 2 1 6 6 C 1.37830 * 120.30447 * 179.97438 * 5 4 2 7 7 C 1.39664 * 119.90431 * 0.02562 * 6 5 4 8 8 C 1.47542 * 120.19081 * 180.02562 * 7 6 5 9 9 O 1.21589 * 120.00516 * 180.02562 * 8 7 6 10 10 N 1.34781 * 119.99682 * 0.02562 * 8 7 6 11 11 C 1.46502 * 119.99648 * 179.97438 * 10 8 7 12 12 C 1.52997 * 109.47048 * 179.97438 * 11 10 8 13 13 F 1.39904 * 112.84774 * 316.19274 * 12 11 10 14 14 C 1.53781 * 113.61768 * 87.50242 * 12 11 10 15 15 C 1.53780 * 87.08100 * 89.11672 * 14 12 11 16 16 H 1.09002 * 113.61460 * 270.88291 * 15 14 12 17 17 C 1.53001 * 113.61322 * 139.98607 * 15 14 12 18 18 O 1.42900 * 109.47448 * 87.49741 * 17 15 14 19 19 C 1.53780 * 87.08328 * 25.43462 * 15 14 12 20 20 C 1.40170 * 119.62182 * 0.02562 * 7 6 5 21 21 O 1.35656 * 120.15557 * 179.97438 * 20 7 6 22 22 C 1.38097 * 119.80594 * 299.73189 * 4 2 1 23 23 H 0.96708 * 114.00246 * 59.99398 * 1 2 3 24 24 H 1.08991 * 109.47274 * 120.00272 * 2 1 3 25 25 H 1.48506 * 109.99834 * 60.00805 * 3 2 1 26 26 H 1.48502 * 110.00011 * 181.32069 * 3 2 1 27 27 H 1.08005 * 119.85105 * 0.02562 * 5 4 2 28 28 H 1.07997 * 120.05138 * 180.02562 * 6 5 4 29 29 H 0.96991 * 120.00443 * 359.97438 * 10 8 7 30 30 H 1.09005 * 109.47084 * 299.99582 * 11 10 8 31 31 H 1.08998 * 109.47420 * 59.99566 * 11 10 8 32 32 H 1.09000 * 113.61597 * 203.67129 * 14 12 11 33 33 H 1.09000 * 113.60958 * 334.56268 * 14 12 11 34 34 H 1.09001 * 109.47230 * 207.50535 * 17 15 14 35 35 H 1.09003 * 109.46893 * 327.50115 * 17 15 14 36 36 H 0.96704 * 113.99811 * 179.97438 * 18 17 15 37 37 H 1.08999 * 113.61710 * 220.01899 * 19 15 14 38 38 H 1.09004 * 113.61313 * 89.11488 * 19 15 14 39 39 H 0.96692 * 113.99788 * 89.99627 * 21 20 7 40 40 H 1.07999 * 119.95920 * 359.96914 * 22 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7103 -1.2305 5 6 2.7272 -0.0333 -2.1396 6 6 3.1926 -0.6731 -3.2682 7 6 2.8604 -2.0101 -3.4976 8 6 3.3556 -2.7014 -4.7033 9 8 3.0639 -3.8653 -4.8999 10 7 4.1314 -2.0426 -5.5869 11 6 4.6236 -2.7292 -6.7839 12 6 5.4733 -1.7637 -7.6125 13 9 4.8979 -0.4935 -7.7256 14 6 6.9544 -1.7365 -7.1995 15 6 7.1746 -2.8781 -8.2060 16 1 7.0344 -3.8707 -7.7779 17 6 8.4752 -2.7512 -9.0018 18 8 9.5399 -3.3696 -8.2766 19 6 5.9398 -2.3504 -8.9553 20 6 2.0537 -2.6916 -2.5758 21 8 1.7240 -3.9902 -2.7881 22 6 1.5997 -2.0341 -1.4424 23 1 -0.3934 0.4418 -0.7650 24 1 1.7923 -0.5138 0.8899 25 1 1.5616 2.4678 1.2086 26 1 3.5346 1.7703 -0.0322 27 1 2.9851 1.0005 -1.9630 28 1 3.8133 -0.1414 -3.9742 29 1 4.3638 -1.1141 -5.4304 30 1 5.2300 -3.5854 -6.4882 31 1 3.7778 -3.0716 -7.3801 32 1 7.4659 -0.8123 -7.4686 33 1 7.1241 -2.0290 -6.1633 34 1 8.3596 -3.2430 -9.9677 35 1 8.7052 -1.6969 -9.1562 36 1 10.3966 -3.3272 -8.7231 37 1 5.2905 -3.1385 -9.3366 38 1 6.1740 -1.5940 -9.7045 39 1 2.3493 -4.6220 -2.4077 40 1 0.9826 -2.5567 -0.7266 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16500644_13422076.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:02:43 Heat of formation + Delta-G solvation = -148.903331 kcal Electronic energy + Delta-G solvation = -25761.346397 eV Core-core repulsion = 21651.416293 eV Total energy + Delta-G solvation = -4109.930104 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 312.125 amu Computer time = 0.77 seconds Orbital eigenvalues (eV) -48.78883 -41.63293 -40.45646 -39.68727 -38.42017 -37.33440 -37.16595 -35.48319 -32.96151 -31.13351 -30.12771 -27.96152 -27.22378 -26.59949 -23.95350 -23.41884 -22.91944 -21.55987 -20.54483 -19.43992 -18.76676 -18.39461 -18.24223 -17.80070 -17.17884 -16.90276 -16.60633 -16.48917 -16.28725 -16.20988 -15.78552 -15.68783 -15.62464 -15.16373 -15.02947 -14.81621 -14.34189 -14.31054 -13.93034 -13.84109 -13.55821 -13.25465 -12.95975 -12.87335 -12.47978 -12.32343 -12.25524 -12.16467 -11.68255 -11.66458 -11.47624 -11.01375 -10.88058 -10.57717 -10.26558 -10.07677 -9.80198 -5.13002 -0.42976 0.08840 1.16247 1.52417 1.74117 1.87951 1.91211 2.55367 2.83618 3.00443 3.08153 3.10234 3.12307 3.31824 3.34087 3.42763 3.60170 3.71468 3.75824 3.96465 4.10577 4.18527 4.19938 4.26837 4.32380 4.38365 4.43128 4.47181 4.51655 4.54497 4.58978 4.67678 4.74251 4.87333 4.94652 5.09399 5.16417 5.17858 5.24252 5.51181 6.35049 6.45630 6.55514 6.69345 7.14577 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.537 6.537 2 C -0.074 4.074 3 Si 0.693 3.307 4 C -0.075 4.075 5 C -0.136 4.136 6 C -0.064 4.064 7 C -0.165 4.165 8 C 0.561 3.439 9 O -0.516 6.516 10 N -0.727 5.727 11 C 0.122 3.878 12 C 0.079 3.921 13 F -0.195 7.195 14 C -0.146 4.146 15 C -0.108 4.108 16 H 0.107 0.893 17 C 0.087 3.913 18 O -0.573 6.573 19 C -0.141 4.141 20 C 0.174 3.826 21 O -0.476 6.476 22 C -0.129 4.129 23 H 0.381 0.619 24 H 0.118 0.882 25 H -0.253 1.253 26 H -0.256 1.256 27 H 0.136 0.864 28 H 0.134 0.866 29 H 0.403 0.597 30 H 0.092 0.908 31 H 0.085 0.915 32 H 0.099 0.901 33 H 0.084 0.916 34 H 0.051 0.949 35 H 0.050 0.950 36 H 0.383 0.617 37 H 0.090 0.910 38 H 0.103 0.897 39 H 0.398 0.602 40 H 0.141 0.859 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.767 3.812 -2.673 5.989 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.342 6.342 2 C -0.185 4.185 3 Si 0.594 3.406 4 C -0.076 4.076 5 C -0.154 4.154 6 C -0.082 4.082 7 C -0.168 4.168 8 C 0.348 3.652 9 O -0.392 6.392 10 N -0.381 5.381 11 C -0.002 4.002 12 C 0.060 3.940 13 F -0.175 7.175 14 C -0.184 4.184 15 C -0.127 4.127 16 H 0.125 0.875 17 C 0.009 3.991 18 O -0.379 6.379 19 C -0.179 4.179 20 C 0.127 3.873 21 O -0.287 6.287 22 C -0.148 4.148 23 H 0.229 0.771 24 H 0.136 0.864 25 H -0.177 1.177 26 H -0.181 1.181 27 H 0.153 0.847 28 H 0.152 0.848 29 H 0.240 0.760 30 H 0.110 0.890 31 H 0.103 0.897 32 H 0.117 0.883 33 H 0.103 0.897 34 H 0.070 0.930 35 H 0.068 0.932 36 H 0.230 0.770 37 H 0.108 0.892 38 H 0.121 0.879 39 H 0.256 0.744 40 H 0.159 0.841 Dipole moment (debyes) X Y Z Total from point charges 3.150 3.379 -1.721 4.930 hybrid contribution 1.002 -0.120 -0.085 1.013 sum 4.152 3.259 -1.806 5.579 Atomic orbital electron populations 1.86531 1.16648 1.81708 1.49325 1.25180 0.85629 1.10447 0.97218 0.94619 0.80933 0.77594 0.87444 1.20466 0.96455 0.94224 0.96473 1.20952 0.99661 1.00032 0.94718 1.21165 0.97501 0.92711 0.96848 1.20359 1.03079 0.95672 0.97713 1.18022 0.78181 0.86348 0.82600 1.90846 1.56529 1.15999 1.75840 1.45709 1.52957 1.16168 1.23247 1.21614 0.98444 0.94398 0.85779 1.22591 0.92780 0.80064 0.98561 1.92863 1.86603 1.41312 1.96763 1.23737 0.93163 1.00131 1.01326 1.22385 0.93451 0.99888 0.96949 0.87481 1.22110 0.86532 0.96525 0.93952 1.86482 1.20261 1.81149 1.50010 1.23607 0.96808 1.01709 0.95806 1.18498 0.91708 0.85932 0.91132 1.84765 1.51653 1.12379 1.79909 1.21347 1.01464 0.94794 0.97169 0.77122 0.86437 1.17742 1.18055 0.84660 0.84809 0.76049 0.88969 0.89665 0.88298 0.89695 0.93041 0.93220 0.76996 0.89176 0.87860 0.74370 0.84101 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.18 12.77 -35.23 -0.45 -0.27 16 2 C -0.07 0.08 2.81 36.01 0.10 0.18 16 3 Si 0.69 -1.46 29.77 -169.99 -5.06 -6.52 16 4 C -0.08 0.05 5.39 -104.58 -0.56 -0.52 16 5 C -0.14 0.22 8.64 -39.63 -0.34 -0.12 16 6 C -0.06 0.07 9.54 -39.20 -0.37 -0.30 16 7 C -0.16 -0.23 5.89 -104.85 -0.62 -0.85 16 8 C 0.56 1.56 7.76 -12.46 -0.10 1.46 16 9 O -0.52 -3.19 15.16 -16.58 -0.25 -3.44 16 10 N -0.73 -0.10 5.40 -61.34 -0.33 -0.43 16 11 C 0.12 -0.04 5.26 -4.04 -0.02 -0.06 16 12 C 0.08 -0.10 1.91 -89.81 -0.17 -0.28 16 13 F -0.20 -0.10 16.61 2.25 0.04 -0.06 16 14 C -0.15 0.26 7.06 -25.92 -0.18 0.08 16 15 C -0.11 0.20 3.66 -89.81 -0.33 -0.13 16 16 H 0.11 -0.14 7.72 -51.93 -0.40 -0.54 16 17 C 0.09 -0.17 6.88 37.16 0.26 0.08 16 18 O -0.57 0.21 13.66 -35.23 -0.48 -0.27 16 19 C -0.14 0.34 7.13 -25.92 -0.18 0.16 16 20 C 0.17 0.35 6.72 -38.70 -0.26 0.09 16 21 O -0.48 -1.39 11.58 -40.54 -0.47 -1.86 16 22 C -0.13 -0.09 9.53 -39.47 -0.38 -0.47 16 23 H 0.38 -1.56 8.70 45.56 0.40 -1.16 16 24 H 0.12 -0.10 7.96 -51.93 -0.41 -0.52 16 25 H -0.25 -0.34 7.11 56.52 0.40 0.06 16 26 H -0.26 0.03 7.11 56.52 0.40 0.43 16 27 H 0.14 -0.51 4.85 -52.48 -0.25 -0.76 16 28 H 0.13 -0.50 6.40 -52.49 -0.34 -0.83 16 29 H 0.40 -0.71 6.06 -40.82 -0.25 -0.96 16 30 H 0.09 -0.04 7.39 -51.93 -0.38 -0.42 16 31 H 0.09 0.03 8.14 -51.93 -0.42 -0.39 16 32 H 0.10 -0.20 7.90 -51.93 -0.41 -0.61 16 33 H 0.08 -0.13 8.10 -51.93 -0.42 -0.55 16 34 H 0.05 -0.15 8.14 -51.93 -0.42 -0.57 16 35 H 0.05 -0.14 7.84 -51.93 -0.41 -0.55 16 36 H 0.38 -1.69 9.12 45.56 0.42 -1.27 16 37 H 0.09 -0.27 8.10 -51.93 -0.42 -0.69 16 38 H 0.10 -0.30 8.10 -51.93 -0.42 -0.72 16 39 H 0.40 -0.32 9.06 45.56 0.41 0.09 16 40 H 0.14 0.07 8.06 -52.49 -0.42 -0.35 16 LS Contribution 338.98 15.07 5.11 5.11 Total: 0.00 -10.31 338.98 -8.42 -18.73 By element: Atomic # 1 Polarization: -6.96 SS G_CDS: -3.36 Total: -10.32 kcal Atomic # 6 Polarization: 2.50 SS G_CDS: -3.16 Total: -0.66 kcal Atomic # 7 Polarization: -0.10 SS G_CDS: -0.33 Total: -0.43 kcal Atomic # 8 Polarization: -4.19 SS G_CDS: -1.65 Total: -5.85 kcal Atomic # 9 Polarization: -0.10 SS G_CDS: 0.04 Total: -0.06 kcal Atomic # 14 Polarization: -1.46 SS G_CDS: -5.06 Total: -6.52 kcal Total LS contribution 5.11 Total: 5.11 kcal Total: -10.31 -8.42 -18.73 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16500644_13422076.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -130.175 kcal (2) G-P(sol) polarization free energy of solvation -10.314 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -140.488 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.415 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.729 kcal (6) G-S(sol) free energy of system = (1) + (5) -148.903 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.77 seconds