Wall clock time and date at job start Sun Mar 7 2021 09:02:46 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50700 * 1 3 3 C 1.37786 * 119.84944 * 2 1 4 4 C 1.39715 * 119.90655 * 180.02562 * 3 2 1 5 5 C 1.47529 * 120.18975 * 179.97438 * 4 3 2 6 6 O 1.21584 * 120.00468 * 179.97438 * 5 4 3 7 7 N 1.34783 * 120.00046 * 0.02562 * 5 4 3 8 8 C 1.46496 * 119.99918 * 180.02562 * 7 5 4 9 9 C 1.53005 * 109.46976 * 179.97438 * 8 7 5 10 10 F 1.39901 * 112.84953 * 48.80220 * 9 8 7 11 11 C 1.53787 * 113.61178 * 179.97438 * 9 8 7 12 12 C 1.53784 * 87.07923 * 140.06478 * 11 9 8 13 13 H 1.09004 * 113.61162 * 220.01809 * 12 11 9 14 14 C 1.52998 * 113.61395 * 89.11282 * 12 11 9 15 15 O 1.42900 * 109.47052 * 174.99711 * 14 12 11 16 16 C 1.53779 * 87.08045 * 334.56667 * 12 11 9 17 17 C 1.40136 * 119.61605 * 0.25534 * 4 3 2 18 18 O 1.35652 * 120.14755 * 179.72564 * 17 4 3 19 19 C 1.38713 * 119.70082 * 359.49030 * 17 4 3 20 20 C 1.50699 * 119.95749 * 180.27697 * 19 17 4 21 21 O 1.42899 * 109.47269 * 75.23402 * 20 19 17 22 22 Si 1.86294 * 109.47124 * 195.23608 * 20 19 17 23 23 C 1.38052 * 120.08131 * 0.50998 * 19 17 4 24 24 H 1.08998 * 109.46699 * 90.00416 * 1 2 3 25 25 H 1.09008 * 109.47171 * 209.99902 * 1 2 3 26 26 H 1.09000 * 109.47184 * 330.00158 * 1 2 3 27 27 H 1.07994 * 120.04613 * 0.04509 * 3 2 1 28 28 H 0.96997 * 119.99730 * 359.97438 * 7 5 4 29 29 H 1.08995 * 109.47662 * 59.99806 * 8 7 5 30 30 H 1.09006 * 109.47270 * 299.99364 * 8 7 5 31 31 H 1.09004 * 113.61202 * 254.61231 * 11 9 8 32 32 H 1.08994 * 113.61447 * 25.51662 * 11 9 8 33 33 H 1.08997 * 109.47537 * 295.00205 * 14 12 11 34 34 H 1.09002 * 109.46990 * 55.00028 * 14 12 11 35 35 H 0.96703 * 114.00488 * 179.97438 * 15 14 12 36 36 H 1.09006 * 113.61307 * 270.88660 * 16 12 11 37 37 H 1.09007 * 113.61642 * 139.98417 * 16 12 11 38 38 H 0.96701 * 114.00787 * 89.99501 * 18 17 4 39 39 H 1.09005 * 109.46877 * 315.23329 * 20 19 17 40 40 H 0.96699 * 113.99920 * 179.97438 * 21 20 19 41 41 H 1.48496 * 110.00210 * 178.68150 * 22 20 19 42 42 H 1.48507 * 109.99937 * 299.99881 * 22 20 19 43 43 H 1.07997 * 119.80093 * 179.76162 * 23 19 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1928 1.1951 0.0000 4 6 3.5900 1.1965 -0.0005 5 6 4.3306 2.4724 -0.0011 6 8 5.5464 2.4697 -0.0011 7 7 3.6594 3.6412 -0.0006 8 6 4.3948 4.9082 -0.0017 9 6 3.4032 6.0734 -0.0015 10 9 2.4052 5.9373 0.9694 11 6 4.0772 7.4558 -0.0020 12 6 2.9839 7.9013 -0.9875 13 1 3.3517 8.5467 -1.7851 14 6 1.7311 8.4534 -0.3044 15 8 0.8264 8.9459 -1.2949 16 6 2.8616 6.4242 -1.3974 17 6 4.2837 -0.0211 -0.0065 18 8 5.6402 -0.0323 -0.0127 19 6 3.5771 -1.2148 -0.0011 20 6 4.3173 -2.5274 -0.0012 21 8 4.8555 -2.7709 1.3000 22 14 3.1443 -3.9017 -0.4551 23 6 2.1966 -1.2017 -0.0005 24 1 -0.3633 -0.0001 -1.0277 25 1 -0.3634 -0.8901 0.5139 26 1 -0.3633 0.8900 0.5138 27 1 1.6511 2.1293 0.0007 28 1 2.6894 3.6434 -0.0002 29 1 5.0206 4.9643 -0.8924 30 1 5.0226 4.9647 0.8876 31 1 4.0307 7.9645 0.9609 32 1 5.0784 7.4532 -0.4326 33 1 1.2486 7.6599 0.2660 34 1 2.0113 9.2649 0.3673 35 1 0.0077 9.3117 -0.9328 36 1 3.5307 6.1396 -2.2095 37 1 1.8338 6.1000 -1.5610 38 1 6.0376 -0.0375 0.8688 39 1 5.1284 -2.4871 -0.7282 40 1 5.3459 -3.6010 1.3738 41 1 3.8691 -5.1974 -0.4898 42 1 2.0337 -3.9672 0.5286 43 1 1.6511 -2.1337 -0.0002 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16500644_13422088.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:02:46 Heat of formation + Delta-G solvation = -150.320622 kcal Electronic energy + Delta-G solvation = -28136.230938 eV Core-core repulsion = 23870.701757 eV Total energy + Delta-G solvation = -4265.529182 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 326.141 amu Computer time = 0.88 seconds Orbital eigenvalues (eV) -48.97204 -41.64920 -40.23063 -39.63664 -37.99555 -37.69493 -37.21143 -35.51431 -33.26637 -32.96467 -30.17443 -27.67102 -27.26739 -27.06333 -26.72969 -24.70083 -22.89681 -21.82939 -21.40701 -20.21673 -19.50434 -18.77479 -18.54788 -18.26245 -17.79630 -17.16585 -16.93172 -16.81447 -16.52378 -16.07683 -15.90275 -15.82355 -15.44683 -15.33195 -15.25677 -15.00104 -14.61019 -14.58926 -14.18877 -14.09277 -13.82232 -13.69858 -13.56316 -13.32417 -13.24414 -13.08007 -12.58458 -12.54205 -12.44865 -11.90284 -11.82667 -11.66987 -11.60869 -11.40768 -10.89678 -10.76604 -10.46882 -10.23111 -10.02995 -9.49262 -5.02703 -0.29905 0.08310 1.20485 1.51827 1.77599 1.86583 1.98993 2.57751 2.86233 2.99162 3.08337 3.17337 3.19551 3.27355 3.36840 3.58615 3.61954 3.76209 3.78578 4.06856 4.10541 4.11961 4.27777 4.29262 4.36062 4.41743 4.43006 4.49234 4.54006 4.57528 4.58600 4.61569 4.73038 4.75449 4.79617 4.95850 4.97909 4.99571 5.13952 5.20727 5.30421 5.34866 5.59957 6.37996 6.40492 6.60662 6.78681 7.20595 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.117 4.117 2 C -0.097 4.097 3 C -0.066 4.066 4 C -0.164 4.164 5 C 0.562 3.438 6 O -0.517 6.517 7 N -0.727 5.727 8 C 0.115 3.885 9 C 0.077 3.923 10 F -0.185 7.185 11 C -0.141 4.141 12 C -0.111 4.111 13 H 0.097 0.903 14 C 0.085 3.915 15 O -0.573 6.573 16 C -0.146 4.146 17 C 0.191 3.809 18 O -0.473 6.473 19 C -0.104 4.104 20 C -0.072 4.072 21 O -0.537 6.537 22 Si 0.689 3.311 23 C -0.075 4.075 24 H 0.078 0.922 25 H 0.070 0.930 26 H 0.071 0.929 27 H 0.131 0.869 28 H 0.402 0.598 29 H 0.091 0.909 30 H 0.082 0.918 31 H 0.088 0.912 32 H 0.111 0.889 33 H 0.058 0.942 34 H 0.050 0.950 35 H 0.383 0.617 36 H 0.105 0.895 37 H 0.085 0.915 38 H 0.399 0.601 39 H 0.082 0.918 40 H 0.382 0.618 41 H -0.259 1.259 42 H -0.253 1.253 43 H 0.136 0.864 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.041 0.537 -0.920 4.179 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.173 4.173 2 C -0.097 4.097 3 C -0.085 4.085 4 C -0.168 4.168 5 C 0.350 3.650 6 O -0.393 6.393 7 N -0.381 5.381 8 C -0.009 4.009 9 C 0.058 3.942 10 F -0.165 7.165 11 C -0.179 4.179 12 C -0.129 4.129 13 H 0.115 0.885 14 C 0.007 3.993 15 O -0.379 6.379 16 C -0.184 4.184 17 C 0.144 3.856 18 O -0.285 6.285 19 C -0.105 4.105 20 C -0.182 4.182 21 O -0.345 6.345 22 Si 0.590 3.410 23 C -0.093 4.093 24 H 0.096 0.904 25 H 0.089 0.911 26 H 0.089 0.911 27 H 0.149 0.851 28 H 0.238 0.762 29 H 0.109 0.891 30 H 0.100 0.900 31 H 0.106 0.894 32 H 0.129 0.871 33 H 0.076 0.924 34 H 0.069 0.931 35 H 0.230 0.770 36 H 0.123 0.877 37 H 0.104 0.896 38 H 0.257 0.743 39 H 0.100 0.900 40 H 0.230 0.770 41 H -0.184 1.184 42 H -0.178 1.178 43 H 0.154 0.846 Dipole moment (debyes) X Y Z Total from point charges -3.392 0.163 -1.517 3.720 hybrid contribution 0.031 -0.071 1.820 1.822 sum -3.361 0.092 0.303 3.376 Atomic orbital electron populations 1.20837 0.89954 1.03451 1.03080 1.19772 0.96805 0.92149 1.00958 1.21131 0.92113 0.98323 0.96957 1.20289 0.93913 0.93219 1.09378 1.17999 0.87244 0.83193 0.76601 1.90837 1.12940 1.87262 1.48259 1.45731 1.10579 1.05192 1.76590 1.21795 0.93813 0.80978 1.04350 1.22244 0.87394 0.96117 0.88431 1.92843 1.62436 1.96660 1.64544 1.23565 0.99502 0.93383 1.01448 1.22258 0.94786 0.96727 0.99170 0.88507 1.22066 0.89659 0.97664 0.89886 1.86449 1.32889 1.82572 1.35984 1.23667 1.03519 0.95953 0.95242 1.18183 0.83931 0.89674 0.93857 1.84666 1.14174 1.95891 1.33730 1.19539 0.93345 0.93512 1.04112 1.24709 1.03886 1.01386 0.88199 1.86542 1.73592 1.44609 1.29717 0.94907 0.80078 0.76558 0.89439 1.21119 0.92768 0.98552 0.96851 0.90380 0.91070 0.91050 0.85116 0.76213 0.89062 0.90024 0.89356 0.87102 0.92393 0.93142 0.76985 0.87695 0.89591 0.74259 0.89957 0.77018 1.18357 1.17818 0.84626 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 0.30 10.00 36.01 0.36 0.66 16 2 C -0.10 0.03 5.87 -104.67 -0.61 -0.58 16 3 C -0.07 0.00 9.18 -39.20 -0.36 -0.36 16 4 C -0.16 -0.40 5.89 -104.85 -0.62 -1.02 16 5 C 0.56 1.92 7.76 -12.47 -0.10 1.82 16 6 O -0.52 -3.46 15.16 -16.59 -0.25 -3.72 16 7 N -0.73 -0.40 5.42 -61.35 -0.33 -0.73 16 8 C 0.11 -0.03 5.37 -4.04 -0.02 -0.05 16 9 C 0.08 -0.10 1.66 -89.80 -0.15 -0.24 16 10 F -0.18 -0.08 15.01 2.25 0.03 -0.04 16 11 C -0.14 0.31 7.13 -25.91 -0.18 0.12 16 12 C -0.11 0.12 4.20 -89.81 -0.38 -0.25 16 13 H 0.10 -0.07 8.14 -51.93 -0.42 -0.49 16 14 C 0.08 -0.05 6.65 37.16 0.25 0.19 16 15 O -0.57 -0.25 13.66 -35.23 -0.48 -0.73 16 16 C -0.15 0.22 7.07 -25.92 -0.18 0.04 16 17 C 0.19 0.61 6.69 -38.69 -0.26 0.35 16 18 O -0.47 -1.85 10.90 -40.53 -0.44 -2.29 16 19 C -0.10 -0.19 5.30 -104.52 -0.55 -0.74 16 20 C -0.07 -0.04 2.37 36.00 0.09 0.05 16 21 O -0.54 -0.59 12.86 -35.23 -0.45 -1.04 16 22 Si 0.69 -0.69 30.19 -169.99 -5.13 -5.82 16 23 C -0.07 -0.03 8.30 -39.53 -0.33 -0.36 16 24 H 0.08 -0.27 8.14 -51.93 -0.42 -0.70 16 25 H 0.07 -0.20 8.08 -51.92 -0.42 -0.62 16 26 H 0.07 -0.23 8.08 -51.93 -0.42 -0.65 16 27 H 0.13 -0.33 6.40 -52.49 -0.34 -0.67 16 28 H 0.40 -0.51 6.22 -40.82 -0.25 -0.76 16 29 H 0.09 -0.04 7.95 -51.93 -0.41 -0.45 16 30 H 0.08 0.04 8.14 -51.93 -0.42 -0.38 16 31 H 0.09 -0.20 8.10 -51.93 -0.42 -0.62 16 32 H 0.11 -0.38 8.10 -51.93 -0.42 -0.81 16 33 H 0.06 -0.03 6.31 -51.93 -0.33 -0.36 16 34 H 0.05 -0.07 8.14 -51.93 -0.42 -0.49 16 35 H 0.38 -1.39 9.12 45.56 0.42 -0.98 16 36 H 0.10 -0.24 7.97 -51.93 -0.41 -0.65 16 37 H 0.09 -0.08 8.10 -51.93 -0.42 -0.50 16 38 H 0.40 0.61 9.06 45.56 0.41 1.02 16 39 H 0.08 0.01 7.82 -51.93 -0.41 -0.40 16 40 H 0.38 -1.03 8.74 45.56 0.40 -0.64 16 41 H -0.26 -0.27 7.11 56.52 0.40 0.14 16 42 H -0.25 -0.32 6.74 56.52 0.38 0.06 16 43 H 0.14 -0.15 4.87 -52.49 -0.26 -0.40 16 LS Contribution 357.98 15.07 5.39 5.39 Total: 0.00 -9.80 357.98 -8.90 -18.71 By element: Atomic # 1 Polarization: -5.17 SS G_CDS: -4.19 Total: -9.35 kcal Atomic # 6 Polarization: 2.68 SS G_CDS: -3.05 Total: -0.37 kcal Atomic # 7 Polarization: -0.40 SS G_CDS: -0.33 Total: -0.73 kcal Atomic # 8 Polarization: -6.15 SS G_CDS: -1.63 Total: -7.78 kcal Atomic # 9 Polarization: -0.08 SS G_CDS: 0.03 Total: -0.04 kcal Atomic # 14 Polarization: -0.69 SS G_CDS: -5.13 Total: -5.82 kcal Total LS contribution 5.39 Total: 5.39 kcal Total: -9.80 -8.90 -18.71 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16500644_13422088.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -131.615 kcal (2) G-P(sol) polarization free energy of solvation -9.801 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -141.416 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.905 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.706 kcal (6) G-S(sol) free energy of system = (1) + (5) -150.321 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.88 seconds