Wall clock time and date at job start Sun Mar 7 2021 09:02:56 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42895 * 1 3 3 Si 1.86293 * 109.47189 * 2 1 4 4 C 1.50696 * 109.47186 * 239.99514 * 2 1 3 5 5 C 1.32693 * 124.68834 * 300.32326 * 4 2 1 6 6 C 1.44501 * 113.10048 * 180.14252 * 5 4 2 7 7 C 1.47051 * 123.49499 * 179.80444 * 6 5 4 8 8 O 1.21647 * 120.00347 * 179.72614 * 7 6 5 9 9 N 1.34778 * 119.99667 * 359.72599 * 7 6 5 10 10 C 1.46500 * 119.99831 * 179.97438 * 9 7 6 11 11 C 1.53000 * 109.47052 * 180.02562 * 10 9 7 12 12 F 1.39905 * 112.84963 * 50.33722 * 11 10 9 13 13 C 1.53781 * 113.61427 * 181.53003 * 11 10 9 14 14 C 1.53787 * 87.07827 * 140.06737 * 13 11 10 15 15 H 1.09004 * 113.60948 * 220.02104 * 14 13 11 16 16 C 1.52993 * 113.61458 * 89.11909 * 14 13 11 17 17 O 1.42906 * 109.47119 * 174.99817 * 16 14 13 18 18 C 1.53775 * 113.69292 * 279.06759 * 11 10 9 19 19 C 1.36225 * 113.01576 * 359.53460 * 6 5 4 20 20 Cl 1.73603 * 124.60528 * 180.22402 * 19 6 5 21 21 S 1.70439 * 110.79064 * 0.24906 * 19 6 5 22 22 H 0.96702 * 114.00104 * 299.99704 * 1 2 3 23 23 H 1.09002 * 109.46907 * 119.99689 * 2 1 3 24 24 H 1.48504 * 109.99874 * 299.99851 * 3 2 1 25 25 H 1.48500 * 110.00371 * 61.31721 * 3 2 1 26 26 H 1.08005 * 123.45074 * 359.95660 * 5 4 2 27 27 H 0.97000 * 119.99788 * 0.02562 * 9 7 6 28 28 H 1.08994 * 109.47050 * 60.00514 * 10 9 7 29 29 H 1.08997 * 109.47643 * 300.00240 * 10 9 7 30 30 H 1.08999 * 113.61554 * 254.61065 * 13 11 10 31 31 H 1.08996 * 113.61406 * 25.43654 * 13 11 10 32 32 H 1.08997 * 109.47234 * 294.99618 * 16 14 13 33 33 H 1.09002 * 109.47417 * 54.99977 * 16 14 13 34 34 H 0.96703 * 114.00069 * 179.97438 * 17 16 14 35 35 H 1.09003 * 113.61685 * 334.55633 * 18 11 10 36 36 H 1.09002 * 113.61807 * 105.45839 * 18 11 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7564 0.0000 4 6 1.9313 -0.7105 -1.2304 5 6 1.6637 -1.9739 -1.5350 6 6 2.2764 -2.4009 -2.7720 7 6 2.1332 -3.7568 -3.3229 8 8 2.6734 -4.0467 -4.3736 9 7 1.4034 -4.6784 -2.6636 10 6 1.2603 -6.0290 -3.2127 11 6 0.3894 -6.8702 -2.2773 12 9 -0.8104 -6.2366 -1.9360 13 6 0.2070 -8.3233 -2.7462 14 6 0.3478 -8.7341 -1.2709 15 1 0.9358 -9.6401 -1.1243 16 6 -0.9803 -8.7566 -0.5116 17 8 -0.7655 -9.2589 0.8089 18 6 1.1513 -7.4387 -1.0685 19 6 2.9956 -1.4155 -3.3781 20 17 3.8494 -1.5984 -4.8785 21 16 2.9440 0.0214 -2.4628 22 1 -0.3933 0.4417 0.7651 23 1 1.7923 -0.5138 0.8900 24 1 1.5614 2.4678 -1.2086 25 1 1.5878 2.4586 1.2242 26 1 1.0530 -2.6182 -0.9197 27 1 0.9724 -4.4471 -1.8260 28 1 2.2438 -6.4895 -3.3058 29 1 0.7903 -5.9742 -4.1946 30 1 -0.7790 -8.5268 -3.1639 31 1 1.0176 -8.6826 -3.3801 32 1 -1.3834 -7.7455 -0.4546 33 1 -1.6871 -9.4007 -1.0348 34 1 -1.5666 -9.3008 1.3489 35 1 2.2208 -7.5566 -1.2426 36 1 0.9277 -6.9281 -0.1318 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16500644_13431040.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:02:56 Heat of formation + Delta-G solvation = -103.103936 kcal Electronic energy + Delta-G solvation = -24383.347309 eV Core-core repulsion = 20323.437861 eV Total energy + Delta-G solvation = -4059.909448 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 336.043 amu Computer time = 0.63 seconds Orbital eigenvalues (eV) -48.94559 -40.96792 -39.93696 -38.88127 -37.91986 -37.24054 -37.07961 -35.52990 -31.89614 -30.40770 -27.48421 -27.16128 -26.86753 -25.07634 -22.84146 -22.05891 -20.76238 -20.15723 -19.30178 -18.74745 -18.61266 -18.09431 -17.26494 -16.99883 -16.84178 -16.46019 -16.31813 -15.93695 -15.70542 -15.44804 -15.31247 -14.91593 -14.71375 -14.43841 -14.33129 -14.14094 -13.99974 -13.64660 -13.53190 -13.30991 -13.09857 -12.57288 -12.54110 -12.42032 -12.07738 -11.95717 -11.89086 -11.61227 -11.39591 -10.90169 -10.83569 -10.67859 -10.18916 -9.82894 -9.64696 -5.24100 -0.56254 -0.18419 0.45750 0.71724 1.03410 1.12253 1.40256 1.75294 2.07191 2.29211 2.87168 3.00336 3.02991 3.11246 3.19610 3.37842 3.43312 3.79421 3.87989 3.90418 4.12125 4.14770 4.30189 4.36221 4.39062 4.42787 4.50707 4.56619 4.59749 4.72206 4.74211 4.80633 4.93867 4.99019 5.14990 5.30957 6.19916 6.39563 6.61101 7.18163 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.531 6.531 2 C -0.034 4.034 3 Si 0.643 3.357 4 C -0.189 4.189 5 C -0.071 4.071 6 C -0.159 4.159 7 C 0.579 3.421 8 O -0.517 6.517 9 N -0.722 5.722 10 C 0.115 3.885 11 C 0.077 3.923 12 F -0.184 7.184 13 C -0.141 4.141 14 C -0.111 4.111 15 H 0.096 0.904 16 C 0.085 3.915 17 O -0.573 6.573 18 C -0.146 4.146 19 C -0.116 4.116 20 Cl 0.027 6.973 21 S 0.247 5.753 22 H 0.385 0.615 23 H 0.092 0.908 24 H -0.232 1.232 25 H -0.233 1.233 26 H 0.156 0.844 27 H 0.403 0.597 28 H 0.092 0.908 29 H 0.082 0.918 30 H 0.088 0.912 31 H 0.111 0.889 32 H 0.058 0.942 33 H 0.050 0.950 34 H 0.383 0.617 35 H 0.105 0.895 36 H 0.085 0.915 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.088 0.541 5.099 5.129 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.339 6.339 2 C -0.145 4.145 3 Si 0.541 3.459 4 C -0.306 4.306 5 C -0.100 4.100 6 C -0.177 4.177 7 C 0.364 3.636 8 O -0.394 6.394 9 N -0.375 5.375 10 C -0.009 4.009 11 C 0.058 3.942 12 F -0.164 7.164 13 C -0.179 4.179 14 C -0.129 4.129 15 H 0.115 0.885 16 C 0.007 3.993 17 O -0.379 6.379 18 C -0.184 4.184 19 C -0.263 4.263 20 Cl 0.056 6.944 21 S 0.512 5.488 22 H 0.234 0.766 23 H 0.109 0.891 24 H -0.155 1.155 25 H -0.156 1.156 26 H 0.173 0.827 27 H 0.239 0.761 28 H 0.110 0.890 29 H 0.101 0.899 30 H 0.106 0.894 31 H 0.129 0.871 32 H 0.076 0.924 33 H 0.069 0.931 34 H 0.230 0.770 35 H 0.123 0.877 36 H 0.104 0.896 Dipole moment (debyes) X Y Z Total from point charges 1.466 2.261 3.228 4.205 hybrid contribution -2.612 -1.440 1.153 3.197 sum -1.146 0.821 4.381 4.602 Atomic orbital electron populations 1.86600 1.17083 1.80085 1.50136 1.24005 0.84754 1.10045 0.95740 0.95326 0.91574 0.75302 0.83693 1.23514 1.07366 0.98040 1.01725 1.20967 0.99018 0.95281 0.94749 1.20137 1.04735 0.95333 0.97540 1.17363 0.78744 0.83446 0.84046 1.90881 1.46636 1.80060 1.21806 1.45633 1.53407 1.11559 1.26941 1.21801 1.00294 0.81728 0.97074 1.22237 0.82218 0.92365 0.97368 1.92852 1.47037 1.83398 1.93156 1.23560 1.04937 0.92500 0.96891 1.22252 0.96753 0.99514 0.94389 0.88525 1.22070 0.95455 0.98504 0.83277 1.86448 1.38210 1.87987 1.25246 1.23658 1.00458 0.96341 0.97909 1.25516 1.03141 1.00858 0.96737 1.98438 1.73285 1.97052 1.25614 1.83286 1.46315 1.08219 1.10988 0.76593 0.89068 1.15520 1.15643 0.82670 0.76136 0.88979 0.89949 0.89370 0.87097 0.92382 0.93139 0.77002 0.87701 0.89621 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 0.43 12.82 -35.23 -0.45 -0.02 16 2 C -0.03 0.06 2.94 36.00 0.11 0.17 16 3 Si 0.64 -1.42 30.91 -169.99 -5.25 -6.68 16 4 C -0.19 0.02 5.72 -36.20 -0.21 -0.18 16 5 C -0.07 -0.02 9.71 -39.00 -0.38 -0.40 16 6 C -0.16 -0.37 5.98 -104.58 -0.63 -0.99 16 7 C 0.58 1.93 7.79 -12.69 -0.10 1.83 16 8 O -0.52 -3.28 14.91 5.24 0.08 -3.20 16 9 N -0.72 -0.45 5.45 -61.51 -0.34 -0.78 16 10 C 0.12 -0.03 5.35 -4.04 -0.02 -0.05 16 11 C 0.08 -0.09 1.63 -89.81 -0.15 -0.23 16 12 F -0.18 -0.14 15.07 2.25 0.03 -0.11 16 13 C -0.14 0.30 7.13 -25.92 -0.18 0.11 16 14 C -0.11 0.12 4.20 -89.81 -0.38 -0.26 16 15 H 0.10 -0.07 8.14 -51.93 -0.42 -0.49 16 16 C 0.08 -0.04 6.66 37.15 0.25 0.20 16 17 O -0.57 -0.29 13.66 -35.23 -0.48 -0.78 16 18 C -0.15 0.22 7.07 -25.92 -0.18 0.04 16 19 C -0.12 -0.29 6.87 30.01 0.21 -0.08 16 20 Cl 0.03 0.10 27.20 -51.86 -1.41 -1.31 16 21 S 0.25 0.02 20.17 -107.50 -2.17 -2.15 16 22 H 0.39 -1.86 8.74 45.56 0.40 -1.46 16 23 H 0.09 -0.37 7.96 -51.93 -0.41 -0.78 16 24 H -0.23 -0.17 7.11 56.52 0.40 0.23 16 25 H -0.23 0.19 7.11 56.52 0.40 0.59 16 26 H 0.16 -0.25 7.10 -52.48 -0.37 -0.63 16 27 H 0.40 -0.41 6.77 -40.82 -0.28 -0.68 16 28 H 0.09 -0.07 7.98 -51.93 -0.41 -0.48 16 29 H 0.08 0.05 8.14 -51.93 -0.42 -0.37 16 30 H 0.09 -0.19 8.10 -51.93 -0.42 -0.61 16 31 H 0.11 -0.39 8.10 -51.93 -0.42 -0.81 16 32 H 0.06 -0.02 6.31 -51.93 -0.33 -0.35 16 33 H 0.05 -0.06 8.14 -51.93 -0.42 -0.49 16 34 H 0.38 -1.35 9.12 45.56 0.42 -0.94 16 35 H 0.10 -0.25 7.99 -51.93 -0.41 -0.67 16 36 H 0.09 -0.08 8.10 -51.93 -0.42 -0.50 16 LS Contribution 336.14 15.07 5.07 5.07 Total: 0.00 -8.52 336.14 -9.72 -18.24 By element: Atomic # 1 Polarization: -5.29 SS G_CDS: -3.13 Total: -8.42 kcal Atomic # 6 Polarization: 1.81 SS G_CDS: -1.66 Total: 0.15 kcal Atomic # 7 Polarization: -0.45 SS G_CDS: -0.34 Total: -0.78 kcal Atomic # 8 Polarization: -3.15 SS G_CDS: -0.85 Total: -4.00 kcal Atomic # 9 Polarization: -0.14 SS G_CDS: 0.03 Total: -0.11 kcal Atomic # 14 Polarization: -1.42 SS G_CDS: -5.25 Total: -6.68 kcal Atomic # 16 Polarization: 0.02 SS G_CDS: -2.17 Total: -2.15 kcal Atomic # 17 Polarization: 0.10 SS G_CDS: -1.41 Total: -1.31 kcal Total LS contribution 5.07 Total: 5.07 kcal Total: -8.52 -9.72 -18.24 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16500644_13431040.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -84.865 kcal (2) G-P(sol) polarization free energy of solvation -8.519 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -93.384 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.720 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.239 kcal (6) G-S(sol) free energy of system = (1) + (5) -103.104 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.63 seconds