Wall clock time and date at job start Sun Mar 7 2021 09:02:56 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42895 * 1 3 3 Si 1.86293 * 109.47189 * 2 1 4 4 C 1.50696 * 109.47186 * 239.99514 * 2 1 3 5 5 C 1.32693 * 124.68834 * 300.32326 * 4 2 1 6 6 C 1.44501 * 113.10048 * 180.14252 * 5 4 2 7 7 C 1.47051 * 123.49499 * 179.80444 * 6 5 4 8 8 O 1.21647 * 120.00347 * 179.72614 * 7 6 5 9 9 N 1.34778 * 119.99667 * 359.72599 * 7 6 5 10 10 C 1.46500 * 119.99831 * 179.97438 * 9 7 6 11 11 C 1.53000 * 109.47052 * 180.02562 * 10 9 7 12 12 F 1.39905 * 112.84963 * 50.33722 * 11 10 9 13 13 C 1.53781 * 113.61427 * 181.53003 * 11 10 9 14 14 C 1.53787 * 87.07827 * 140.06737 * 13 11 10 15 15 H 1.09004 * 113.60948 * 220.02104 * 14 13 11 16 16 C 1.52993 * 113.61458 * 89.11909 * 14 13 11 17 17 O 1.42906 * 109.47119 * 174.99817 * 16 14 13 18 18 C 1.53775 * 113.69292 * 279.06759 * 11 10 9 19 19 C 1.36225 * 113.01576 * 359.53460 * 6 5 4 20 20 Cl 1.73603 * 124.60528 * 180.22402 * 19 6 5 21 21 S 1.70439 * 110.79064 * 0.24906 * 19 6 5 22 22 H 0.96702 * 114.00104 * 299.99704 * 1 2 3 23 23 H 1.09002 * 109.46907 * 119.99689 * 2 1 3 24 24 H 1.48504 * 109.99874 * 299.99851 * 3 2 1 25 25 H 1.48500 * 110.00371 * 61.31721 * 3 2 1 26 26 H 1.08005 * 123.45074 * 359.95660 * 5 4 2 27 27 H 0.97000 * 119.99788 * 0.02562 * 9 7 6 28 28 H 1.08994 * 109.47050 * 60.00514 * 10 9 7 29 29 H 1.08997 * 109.47643 * 300.00240 * 10 9 7 30 30 H 1.08999 * 113.61554 * 254.61065 * 13 11 10 31 31 H 1.08996 * 113.61406 * 25.43654 * 13 11 10 32 32 H 1.08997 * 109.47234 * 294.99618 * 16 14 13 33 33 H 1.09002 * 109.47417 * 54.99977 * 16 14 13 34 34 H 0.96703 * 114.00069 * 179.97438 * 17 16 14 35 35 H 1.09003 * 113.61685 * 334.55633 * 18 11 10 36 36 H 1.09002 * 113.61807 * 105.45839 * 18 11 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7564 0.0000 4 6 1.9313 -0.7105 -1.2304 5 6 1.6637 -1.9739 -1.5350 6 6 2.2764 -2.4009 -2.7720 7 6 2.1332 -3.7568 -3.3229 8 8 2.6734 -4.0467 -4.3736 9 7 1.4034 -4.6784 -2.6636 10 6 1.2603 -6.0290 -3.2127 11 6 0.3894 -6.8702 -2.2773 12 9 -0.8104 -6.2366 -1.9360 13 6 0.2070 -8.3233 -2.7462 14 6 0.3478 -8.7341 -1.2709 15 1 0.9358 -9.6401 -1.1243 16 6 -0.9803 -8.7566 -0.5116 17 8 -0.7655 -9.2589 0.8089 18 6 1.1513 -7.4387 -1.0685 19 6 2.9956 -1.4155 -3.3781 20 17 3.8494 -1.5984 -4.8785 21 16 2.9440 0.0214 -2.4628 22 1 -0.3933 0.4417 0.7651 23 1 1.7923 -0.5138 0.8900 24 1 1.5614 2.4678 -1.2086 25 1 1.5878 2.4586 1.2242 26 1 1.0530 -2.6182 -0.9197 27 1 0.9724 -4.4471 -1.8260 28 1 2.2438 -6.4895 -3.3058 29 1 0.7903 -5.9742 -4.1946 30 1 -0.7790 -8.5268 -3.1639 31 1 1.0176 -8.6826 -3.3801 32 1 -1.3834 -7.7455 -0.4546 33 1 -1.6871 -9.4007 -1.0348 34 1 -1.5666 -9.3008 1.3489 35 1 2.2208 -7.5566 -1.2426 36 1 0.9277 -6.9281 -0.1318 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16500644_13431040.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:02:56 Heat of formation + Delta-G solvation = -104.948446 kcal Electronic energy + Delta-G solvation = -24383.427293 eV Core-core repulsion = 20323.437861 eV Total energy + Delta-G solvation = -4059.989432 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 336.043 amu Computer time = 0.72 seconds Orbital eigenvalues (eV) -48.93682 -41.11801 -39.85965 -38.86487 -38.02889 -37.22273 -37.10283 -35.65092 -31.90884 -30.41012 -27.47720 -27.02865 -26.81246 -25.11124 -22.79699 -22.10744 -20.81953 -20.09245 -19.34026 -18.67540 -18.53799 -18.09430 -17.27176 -17.01584 -16.85460 -16.46883 -16.32555 -15.97040 -15.66324 -15.40537 -15.30909 -14.94434 -14.77152 -14.47774 -14.39470 -14.10845 -13.99772 -13.65655 -13.47096 -13.17849 -13.07570 -12.60027 -12.50785 -12.43604 -12.12732 -12.05873 -11.79624 -11.56069 -11.30554 -11.01346 -10.79110 -10.62239 -10.32361 -9.87050 -9.68075 -5.07441 -0.66240 -0.22896 0.44070 0.68038 1.00674 1.17182 1.52365 1.88282 2.00681 2.11843 3.00472 3.11260 3.16137 3.21043 3.26542 3.48994 3.52595 3.83038 3.89378 3.90179 4.21159 4.32722 4.37905 4.42591 4.44263 4.56731 4.58740 4.66608 4.69948 4.75110 4.87235 4.92887 4.93716 5.06280 5.20743 5.30568 6.30761 6.54741 6.83218 7.02488 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.550 6.550 2 C -0.035 4.035 3 Si 0.702 3.298 4 C -0.190 4.190 5 C -0.073 4.073 6 C -0.169 4.169 7 C 0.574 3.426 8 O -0.555 6.555 9 N -0.711 5.711 10 C 0.115 3.885 11 C 0.079 3.921 12 F -0.195 7.195 13 C -0.134 4.134 14 C -0.116 4.116 15 H 0.094 0.906 16 C 0.082 3.918 17 O -0.593 6.593 18 C -0.141 4.141 19 C -0.138 4.138 20 Cl 0.007 6.993 21 S 0.270 5.730 22 H 0.402 0.598 23 H 0.123 0.877 24 H -0.276 1.276 25 H -0.248 1.248 26 H 0.175 0.825 27 H 0.412 0.588 28 H 0.099 0.901 29 H 0.073 0.927 30 H 0.089 0.911 31 H 0.126 0.874 32 H 0.054 0.946 33 H 0.056 0.944 34 H 0.397 0.603 35 H 0.115 0.885 36 H 0.080 0.920 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.333 0.380 6.498 6.517 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.362 6.362 2 C -0.147 4.147 3 Si 0.603 3.397 4 C -0.307 4.307 5 C -0.101 4.101 6 C -0.188 4.188 7 C 0.360 3.640 8 O -0.434 6.434 9 N -0.363 5.363 10 C -0.009 4.009 11 C 0.060 3.940 12 F -0.176 7.176 13 C -0.172 4.172 14 C -0.134 4.134 15 H 0.112 0.888 16 C 0.005 3.995 17 O -0.401 6.401 18 C -0.179 4.179 19 C -0.285 4.285 20 Cl 0.036 6.964 21 S 0.536 5.464 22 H 0.254 0.746 23 H 0.140 0.860 24 H -0.202 1.202 25 H -0.172 1.172 26 H 0.192 0.808 27 H 0.249 0.751 28 H 0.117 0.883 29 H 0.091 0.909 30 H 0.108 0.892 31 H 0.145 0.855 32 H 0.073 0.927 33 H 0.075 0.925 34 H 0.247 0.753 35 H 0.134 0.866 36 H 0.099 0.901 Dipole moment (debyes) X Y Z Total from point charges 1.195 2.093 4.681 5.265 hybrid contribution -2.605 -1.328 0.777 3.026 sum -1.410 0.764 5.458 5.689 Atomic orbital electron populations 1.86554 1.17516 1.80522 1.51581 1.24151 0.84522 1.10085 0.95928 0.94641 0.90589 0.73995 0.80439 1.23825 1.06817 0.98035 1.02039 1.21089 0.99163 0.95746 0.94147 1.20269 1.05195 0.94903 0.98439 1.17603 0.78563 0.84133 0.83726 1.90855 1.48383 1.80776 1.23436 1.45591 1.52361 1.11526 1.26872 1.21865 1.00769 0.81411 0.96870 1.22267 0.81652 0.92516 0.97528 1.92830 1.47769 1.83708 1.93261 1.23592 1.05676 0.91367 0.96560 1.22287 0.96603 0.99523 0.95015 0.88790 1.22124 0.95912 0.98386 0.83091 1.86407 1.39751 1.88063 1.25903 1.23659 1.00975 0.95887 0.97341 1.25773 1.03821 1.02276 0.96618 1.98421 1.73773 1.97252 1.26920 1.83198 1.45893 1.06894 1.10435 0.74621 0.85972 1.20236 1.17220 0.80818 0.75116 0.88315 0.90889 0.89239 0.85544 0.92736 0.92549 0.75307 0.86646 0.90147 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 1.71 12.82 -148.98 -1.91 -0.20 16 2 C -0.04 0.19 2.94 71.23 0.21 0.40 16 3 Si 0.70 -3.61 30.91 68.60 2.12 -1.49 16 4 C -0.19 0.21 5.72 24.51 0.14 0.35 16 5 C -0.07 0.01 9.71 22.70 0.22 0.23 16 6 C -0.17 -0.87 5.98 -19.84 -0.12 -0.99 16 7 C 0.57 4.33 7.79 86.55 0.67 5.00 16 8 O -0.56 -7.91 14.91 -4.18 -0.06 -7.97 16 9 N -0.71 -1.05 5.45 -466.74 -2.54 -3.59 16 10 C 0.11 -0.04 5.35 86.38 0.46 0.43 16 11 C 0.08 -0.20 1.63 -10.27 -0.02 -0.21 16 12 F -0.20 -0.29 15.07 44.97 0.68 0.39 16 13 C -0.13 0.64 7.13 31.12 0.22 0.86 16 14 C -0.12 0.29 4.20 -10.27 -0.04 0.24 16 15 H 0.09 -0.17 8.14 -2.38 -0.02 -0.19 16 16 C 0.08 -0.10 6.66 71.98 0.48 0.38 16 17 O -0.59 -0.52 13.66 -148.98 -2.04 -2.56 16 18 C -0.14 0.49 7.07 31.12 0.22 0.71 16 19 C -0.14 -0.82 6.87 67.35 0.46 -0.36 16 20 Cl 0.01 0.07 27.20 -2.72 -0.07 -0.01 16 21 S 0.27 0.08 20.17 -56.49 -1.14 -1.06 16 22 H 0.40 -4.52 8.74 -74.06 -0.65 -5.16 16 23 H 0.12 -1.35 7.96 -2.39 -0.02 -1.37 16 24 H -0.28 -0.62 7.11 99.48 0.71 0.09 16 25 H -0.25 0.64 7.11 99.48 0.71 1.34 16 26 H 0.17 -0.80 7.10 -2.91 -0.02 -0.82 16 27 H 0.41 -0.95 6.77 -92.71 -0.63 -1.57 16 28 H 0.10 -0.14 7.98 -2.39 -0.02 -0.16 16 29 H 0.07 0.14 8.14 -2.39 -0.02 0.12 16 30 H 0.09 -0.42 8.10 -2.39 -0.02 -0.44 16 31 H 0.13 -1.00 8.10 -2.39 -0.02 -1.02 16 32 H 0.05 -0.04 6.31 -2.39 -0.02 -0.05 16 33 H 0.06 -0.15 8.14 -2.39 -0.02 -0.17 16 34 H 0.40 -2.84 9.12 -74.06 -0.68 -3.52 16 35 H 0.12 -0.65 7.99 -2.39 -0.02 -0.67 16 36 H 0.08 -0.17 8.10 -2.39 -0.02 -0.19 16 Total: 0.00 -20.40 336.14 -2.80 -23.21 By element: Atomic # 1 Polarization: -13.03 SS G_CDS: -0.75 Total: -13.77 kcal Atomic # 6 Polarization: 4.14 SS G_CDS: 2.91 Total: 7.05 kcal Atomic # 7 Polarization: -1.05 SS G_CDS: -2.54 Total: -3.59 kcal Atomic # 8 Polarization: -6.72 SS G_CDS: -4.01 Total: -10.73 kcal Atomic # 9 Polarization: -0.29 SS G_CDS: 0.68 Total: 0.39 kcal Atomic # 14 Polarization: -3.61 SS G_CDS: 2.12 Total: -1.49 kcal Atomic # 16 Polarization: 0.08 SS G_CDS: -1.14 Total: -1.06 kcal Atomic # 17 Polarization: 0.07 SS G_CDS: -0.07 Total: -0.01 kcal Total: -20.40 -2.80 -23.21 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16500644_13431040.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -81.741 kcal (2) G-P(sol) polarization free energy of solvation -20.404 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -102.146 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.803 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.207 kcal (6) G-S(sol) free energy of system = (1) + (5) -104.948 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.72 seconds