Wall clock time and date at job start Sun Mar 7 2021 09:02:59 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42898 * 1 3 3 Si 1.86299 * 109.47277 * 2 1 4 4 C 1.50698 * 109.47108 * 239.99565 * 2 1 3 5 5 C 1.34175 * 125.43750 * 300.36225 * 4 2 1 6 6 C 1.47019 * 105.95314 * 180.14169 * 5 4 2 7 7 C 1.47382 * 127.19392 * 179.83332 * 6 5 4 8 8 O 1.21610 * 119.99739 * 359.70767 * 7 6 5 9 9 N 1.34778 * 119.99984 * 179.70996 * 7 6 5 10 10 C 1.46500 * 119.99831 * 179.97438 * 9 7 6 11 11 C 1.53000 * 109.47052 * 180.02562 * 10 9 7 12 12 F 1.39905 * 112.84963 * 50.33722 * 11 10 9 13 13 C 1.53781 * 113.61427 * 181.53003 * 11 10 9 14 14 C 1.53787 * 87.07827 * 140.06737 * 13 11 10 15 15 H 1.09004 * 113.60948 * 220.02104 * 14 13 11 16 16 C 1.52993 * 113.61458 * 89.11909 * 14 13 11 17 17 O 1.42906 * 109.47119 * 174.99817 * 16 14 13 18 18 C 1.53775 * 113.69292 * 279.06759 * 11 10 9 19 19 C 1.36419 * 105.61696 * 359.57491 * 6 5 4 20 20 O 1.33658 * 108.39185 * 0.25862 * 19 6 5 21 21 H 0.96700 * 114.00123 * 300.00165 * 1 2 3 22 22 H 1.09005 * 109.47211 * 119.99542 * 2 1 3 23 23 H 1.48504 * 109.99855 * 299.99917 * 3 2 1 24 24 H 1.48498 * 110.00216 * 61.31787 * 3 2 1 25 25 H 1.08000 * 127.02929 * 359.97438 * 5 4 2 26 26 H 0.97000 * 119.99788 * 0.02562 * 9 7 6 27 27 H 1.08994 * 109.47050 * 60.00514 * 10 9 7 28 28 H 1.08997 * 109.47643 * 300.00240 * 10 9 7 29 29 H 1.08999 * 113.61554 * 254.61065 * 13 11 10 30 30 H 1.08996 * 113.61406 * 25.43654 * 13 11 10 31 31 H 1.08997 * 109.47234 * 294.99618 * 16 14 13 32 32 H 1.09002 * 109.47417 * 54.99977 * 16 14 13 33 33 H 0.96703 * 114.00069 * 179.97438 * 17 16 14 34 34 H 1.09003 * 113.61685 * 334.55633 * 18 11 10 35 35 H 1.09002 * 113.61807 * 105.45839 * 18 11 10 36 36 H 1.07998 * 125.80622 * 180.26061 * 19 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7105 -1.2304 5 6 1.6697 -1.9862 -1.5534 6 6 2.3682 -2.2330 -2.8233 7 6 2.3967 -3.4882 -3.5952 8 8 1.8001 -4.4663 -3.1875 9 7 3.0840 -3.5519 -4.7528 10 6 3.1128 -4.7998 -5.5198 11 6 3.9563 -4.6038 -6.7811 12 9 5.2089 -4.0403 -6.5149 13 6 4.0201 -5.8503 -7.6794 14 6 3.9046 -4.8951 -8.8790 15 1 3.2606 -5.2694 -9.6748 16 6 5.2545 -4.3906 -9.3929 17 8 5.0533 -3.6086 -10.5720 18 6 3.2011 -3.9123 -7.9283 19 6 2.9797 -1.0556 -3.1409 20 8 2.7065 -0.1663 -2.1812 21 1 -0.3933 0.4417 0.7650 22 1 1.7923 -0.5138 0.8901 23 1 1.5615 2.4678 -1.2085 24 1 1.5879 2.4586 1.2242 25 1 1.0707 -2.6892 -0.9935 26 1 3.5601 -2.7718 -5.0777 27 1 2.0969 -5.0768 -5.8012 28 1 3.5495 -5.5909 -4.9104 29 1 4.9737 -6.3758 -7.6300 30 1 3.1639 -6.5152 -7.5650 31 1 5.7288 -3.7774 -8.6268 32 1 5.8954 -5.2410 -9.6260 33 1 5.8686 -3.2550 -10.9533 34 1 2.1203 -4.0466 -7.8831 35 1 3.4935 -2.8732 -8.0799 36 1 3.5820 -0.8730 -4.0185 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16500644_13456056.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:02:59 Heat of formation + Delta-G solvation = -113.740984 kcal Electronic energy + Delta-G solvation = -22403.487160 eV Core-core repulsion = 18578.845568 eV Total energy + Delta-G solvation = -3824.641591 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 286.109 amu Computer time = 0.54 seconds Orbital eigenvalues (eV) -48.98950 -43.68547 -40.55419 -39.80022 -38.11285 -37.24959 -35.59547 -33.93306 -32.11827 -30.21549 -27.38209 -27.16384 -26.48846 -24.54240 -22.86071 -22.17027 -20.98869 -20.17707 -19.21350 -18.79118 -18.48434 -17.60756 -17.39399 -17.19890 -17.00315 -16.65528 -16.26433 -15.90010 -15.82698 -15.79489 -15.42094 -15.20996 -14.60207 -14.23663 -14.10106 -14.03423 -13.75574 -13.67245 -13.58033 -13.33708 -12.80711 -12.57314 -12.09867 -11.91627 -11.66923 -11.42793 -11.07201 -10.88866 -10.86000 -10.69532 -10.22102 -9.75215 -5.02371 0.24736 0.88466 1.12580 1.39266 1.68968 1.91429 1.94218 2.35818 2.84771 2.97653 3.05902 3.14801 3.22678 3.35230 3.46372 3.58808 3.76577 3.89013 4.09645 4.16683 4.27676 4.33802 4.37422 4.40483 4.48250 4.54267 4.56966 4.63174 4.71615 4.77781 4.81515 4.96111 5.11830 5.22879 5.28511 5.87988 6.25449 6.36503 6.59850 7.16346 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.533 6.533 2 C -0.038 4.038 3 Si 0.702 3.298 4 C -0.011 4.011 5 C -0.120 4.120 6 C -0.238 4.238 7 C 0.591 3.409 8 O -0.530 6.530 9 N -0.726 5.726 10 C 0.115 3.885 11 C 0.077 3.923 12 F -0.184 7.184 13 C -0.141 4.141 14 C -0.111 4.111 15 H 0.096 0.904 16 C 0.085 3.915 17 O -0.573 6.573 18 C -0.147 4.147 19 C 0.035 3.965 20 O -0.164 6.164 21 H 0.389 0.611 22 H 0.098 0.902 23 H -0.252 1.252 24 H -0.253 1.253 25 H 0.162 0.838 26 H 0.401 0.599 27 H 0.092 0.908 28 H 0.083 0.917 29 H 0.088 0.912 30 H 0.111 0.889 31 H 0.058 0.942 32 H 0.051 0.949 33 H 0.383 0.617 34 H 0.104 0.896 35 H 0.085 0.915 36 H 0.215 0.785 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.099 1.850 -0.433 4.518 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.342 6.342 2 C -0.147 4.147 3 Si 0.600 3.400 4 C -0.059 4.059 5 C -0.140 4.140 6 C -0.243 4.243 7 C 0.379 3.621 8 O -0.407 6.407 9 N -0.379 5.379 10 C -0.009 4.009 11 C 0.058 3.942 12 F -0.164 7.164 13 C -0.179 4.179 14 C -0.129 4.129 15 H 0.115 0.885 16 C 0.007 3.993 17 O -0.379 6.379 18 C -0.184 4.184 19 C -0.035 4.035 20 O -0.060 6.060 21 H 0.238 0.762 22 H 0.115 0.885 23 H -0.176 1.176 24 H -0.177 1.177 25 H 0.180 0.820 26 H 0.236 0.764 27 H 0.110 0.890 28 H 0.101 0.899 29 H 0.107 0.893 30 H 0.129 0.871 31 H 0.076 0.924 32 H 0.069 0.931 33 H 0.230 0.770 34 H 0.123 0.877 35 H 0.104 0.896 36 H 0.232 0.768 Dipole moment (debyes) X Y Z Total from point charges 3.031 1.813 -0.530 3.571 hybrid contribution -0.145 0.089 0.138 0.219 sum 2.887 1.902 -0.392 3.479 Atomic orbital electron populations 1.86563 1.16809 1.80438 1.50349 1.23810 0.84971 1.12255 0.93658 0.94488 0.91319 0.73183 0.80963 1.21059 0.99281 0.92786 0.92799 1.22472 1.00650 0.95682 0.95163 1.21447 1.07882 0.95036 0.99893 1.17227 0.78329 0.86753 0.79820 1.90824 1.43948 1.36923 1.69009 1.45639 1.53843 1.14966 1.23456 1.21807 1.00786 0.87415 0.90924 1.22237 0.80718 0.96789 0.94426 1.92847 1.42538 1.86146 1.94913 1.23560 1.05112 0.95747 0.93464 1.22256 0.97143 0.96436 0.97106 0.88516 1.22067 0.95385 0.94513 0.87316 1.86451 1.36842 1.71304 1.43312 1.23664 1.00903 1.00515 0.93336 1.24469 0.99632 0.87024 0.92404 1.83657 1.54770 1.39936 1.27663 0.76155 0.88460 1.17570 1.17696 0.82049 0.76400 0.89010 0.89885 0.89318 0.87096 0.92375 0.93121 0.76969 0.87716 0.89587 0.76848 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.35 12.84 -35.23 -0.45 -0.80 16 2 C -0.04 0.02 2.97 36.00 0.11 0.12 16 3 Si 0.70 -0.90 32.09 -169.99 -5.45 -6.35 16 4 C -0.01 -0.02 6.24 -35.74 -0.22 -0.24 16 5 C -0.12 -0.35 10.87 -37.46 -0.41 -0.76 16 6 C -0.24 -0.49 6.31 -103.27 -0.65 -1.14 16 7 C 0.59 1.86 7.81 -12.54 -0.10 1.77 16 8 O -0.53 -3.79 16.98 5.27 0.09 -3.70 16 9 N -0.73 0.09 5.47 -61.40 -0.34 -0.25 16 10 C 0.11 -0.07 5.35 -4.04 -0.02 -0.10 16 11 C 0.08 -0.13 1.63 -89.81 -0.15 -0.27 16 12 F -0.18 0.02 15.07 2.25 0.03 0.05 16 13 C -0.14 0.35 7.13 -25.92 -0.18 0.16 16 14 C -0.11 0.15 4.20 -89.81 -0.38 -0.23 16 15 H 0.10 -0.08 8.14 -51.93 -0.42 -0.51 16 16 C 0.08 -0.07 6.66 37.15 0.25 0.17 16 17 O -0.57 -0.17 13.66 -35.23 -0.48 -0.65 16 18 C -0.15 0.27 7.07 -25.92 -0.18 0.08 16 19 C 0.04 -0.03 11.61 30.08 0.35 0.32 16 20 O -0.16 -0.12 8.89 7.65 0.07 -0.05 16 21 H 0.39 -1.50 8.74 45.56 0.40 -1.10 16 22 H 0.10 -0.27 7.96 -51.93 -0.41 -0.68 16 23 H -0.25 -0.63 7.11 56.52 0.40 -0.23 16 24 H -0.25 -0.01 7.11 56.52 0.40 0.40 16 25 H 0.16 0.51 8.06 -52.49 -0.42 0.08 16 26 H 0.40 -1.00 7.20 -40.82 -0.29 -1.30 16 27 H 0.09 -0.08 7.98 -51.93 -0.41 -0.49 16 28 H 0.08 0.01 8.14 -51.93 -0.42 -0.41 16 29 H 0.09 -0.22 8.10 -51.93 -0.42 -0.64 16 30 H 0.11 -0.41 8.10 -51.93 -0.42 -0.83 16 31 H 0.06 -0.05 6.31 -51.93 -0.33 -0.38 16 32 H 0.05 -0.08 8.14 -51.93 -0.42 -0.50 16 33 H 0.38 -1.45 9.12 45.56 0.42 -1.03 16 34 H 0.10 -0.26 7.99 -51.93 -0.41 -0.68 16 35 H 0.09 -0.11 8.10 -51.93 -0.42 -0.53 16 36 H 0.22 -1.14 7.47 -52.49 -0.39 -1.53 16 LS Contribution 316.61 15.07 4.77 4.77 Total: 0.00 -10.51 316.61 -6.94 -17.46 By element: Atomic # 1 Polarization: -6.78 SS G_CDS: -3.59 Total: -10.37 kcal Atomic # 6 Polarization: 1.48 SS G_CDS: -1.59 Total: -0.11 kcal Atomic # 7 Polarization: 0.09 SS G_CDS: -0.34 Total: -0.25 kcal Atomic # 8 Polarization: -4.42 SS G_CDS: -0.78 Total: -5.20 kcal Atomic # 9 Polarization: 0.02 SS G_CDS: 0.03 Total: 0.05 kcal Atomic # 14 Polarization: -0.90 SS G_CDS: -5.45 Total: -6.35 kcal Total LS contribution 4.77 Total: 4.77 kcal Total: -10.51 -6.94 -17.46 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16500644_13456056.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -96.283 kcal (2) G-P(sol) polarization free energy of solvation -10.515 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -106.797 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.944 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.458 kcal (6) G-S(sol) free energy of system = (1) + (5) -113.741 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.54 seconds