Wall clock time and date at job start Sun Mar 7 2021 09:02:58 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42898 * 1 3 3 Si 1.86299 * 109.47277 * 2 1 4 4 C 1.50698 * 109.47108 * 239.99565 * 2 1 3 5 5 C 1.34175 * 125.43750 * 300.36225 * 4 2 1 6 6 C 1.47019 * 105.95314 * 180.14169 * 5 4 2 7 7 C 1.47382 * 127.19392 * 179.83332 * 6 5 4 8 8 O 1.21610 * 119.99739 * 359.70767 * 7 6 5 9 9 N 1.34778 * 119.99984 * 179.70996 * 7 6 5 10 10 C 1.46500 * 119.99831 * 179.97438 * 9 7 6 11 11 C 1.53000 * 109.47052 * 180.02562 * 10 9 7 12 12 F 1.39905 * 112.84963 * 50.33722 * 11 10 9 13 13 C 1.53781 * 113.61427 * 181.53003 * 11 10 9 14 14 C 1.53787 * 87.07827 * 140.06737 * 13 11 10 15 15 H 1.09004 * 113.60948 * 220.02104 * 14 13 11 16 16 C 1.52993 * 113.61458 * 89.11909 * 14 13 11 17 17 O 1.42906 * 109.47119 * 174.99817 * 16 14 13 18 18 C 1.53775 * 113.69292 * 279.06759 * 11 10 9 19 19 C 1.36419 * 105.61696 * 359.57491 * 6 5 4 20 20 O 1.33658 * 108.39185 * 0.25862 * 19 6 5 21 21 H 0.96700 * 114.00123 * 300.00165 * 1 2 3 22 22 H 1.09005 * 109.47211 * 119.99542 * 2 1 3 23 23 H 1.48504 * 109.99855 * 299.99917 * 3 2 1 24 24 H 1.48498 * 110.00216 * 61.31787 * 3 2 1 25 25 H 1.08000 * 127.02929 * 359.97438 * 5 4 2 26 26 H 0.97000 * 119.99788 * 0.02562 * 9 7 6 27 27 H 1.08994 * 109.47050 * 60.00514 * 10 9 7 28 28 H 1.08997 * 109.47643 * 300.00240 * 10 9 7 29 29 H 1.08999 * 113.61554 * 254.61065 * 13 11 10 30 30 H 1.08996 * 113.61406 * 25.43654 * 13 11 10 31 31 H 1.08997 * 109.47234 * 294.99618 * 16 14 13 32 32 H 1.09002 * 109.47417 * 54.99977 * 16 14 13 33 33 H 0.96703 * 114.00069 * 179.97438 * 17 16 14 34 34 H 1.09003 * 113.61685 * 334.55633 * 18 11 10 35 35 H 1.09002 * 113.61807 * 105.45839 * 18 11 10 36 36 H 1.07998 * 125.80622 * 180.26061 * 19 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7105 -1.2304 5 6 1.6697 -1.9862 -1.5534 6 6 2.3682 -2.2330 -2.8233 7 6 2.3967 -3.4882 -3.5952 8 8 1.8001 -4.4663 -3.1875 9 7 3.0840 -3.5519 -4.7528 10 6 3.1128 -4.7998 -5.5198 11 6 3.9563 -4.6038 -6.7811 12 9 5.2089 -4.0403 -6.5149 13 6 4.0201 -5.8503 -7.6794 14 6 3.9046 -4.8951 -8.8790 15 1 3.2606 -5.2694 -9.6748 16 6 5.2545 -4.3906 -9.3929 17 8 5.0533 -3.6086 -10.5720 18 6 3.2011 -3.9123 -7.9283 19 6 2.9797 -1.0556 -3.1409 20 8 2.7065 -0.1663 -2.1812 21 1 -0.3933 0.4417 0.7650 22 1 1.7923 -0.5138 0.8901 23 1 1.5615 2.4678 -1.2085 24 1 1.5879 2.4586 1.2242 25 1 1.0707 -2.6892 -0.9935 26 1 3.5601 -2.7718 -5.0777 27 1 2.0969 -5.0768 -5.8012 28 1 3.5495 -5.5909 -4.9104 29 1 4.9737 -6.3758 -7.6300 30 1 3.1639 -6.5152 -7.5650 31 1 5.7288 -3.7774 -8.6268 32 1 5.8954 -5.2410 -9.6260 33 1 5.8686 -3.2550 -10.9533 34 1 2.1203 -4.0466 -7.8831 35 1 3.4935 -2.8732 -8.0799 36 1 3.5820 -0.8730 -4.0185 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16500644_13456056.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:02:58 Heat of formation + Delta-G solvation = -119.134297 kcal Electronic energy + Delta-G solvation = -22403.721031 eV Core-core repulsion = 18578.845568 eV Total energy + Delta-G solvation = -3824.875463 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 286.109 amu Computer time = 0.57 seconds Orbital eigenvalues (eV) -48.93052 -43.74478 -40.68425 -39.75714 -38.09341 -37.20362 -35.72707 -34.02595 -32.15483 -30.18909 -27.33559 -27.01592 -26.46416 -24.59961 -22.80165 -22.27572 -21.06662 -20.07626 -19.20302 -18.77149 -18.42153 -17.62046 -17.41753 -17.26242 -16.97601 -16.63596 -16.30429 -15.89846 -15.82786 -15.79041 -15.35316 -15.17686 -14.67939 -14.25689 -14.21743 -14.06090 -13.76265 -13.68214 -13.47406 -13.17761 -12.83404 -12.46209 -12.14613 -11.80087 -11.64328 -11.30956 -11.25606 -11.01054 -10.79013 -10.68350 -10.31848 -9.78801 -4.92377 0.21100 0.76954 1.18153 1.44014 1.72559 1.89609 1.96305 2.18854 3.00283 3.11156 3.16013 3.25747 3.34026 3.47222 3.49063 3.55722 3.89685 3.92346 4.20506 4.25847 4.36936 4.38357 4.43680 4.50229 4.56881 4.58785 4.66352 4.70374 4.85658 4.87148 4.93027 5.05078 5.10801 5.18895 5.29941 5.81827 6.32607 6.50263 6.84585 7.02646 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.557 6.557 2 C -0.050 4.050 3 Si 0.785 3.215 4 C -0.015 4.015 5 C -0.149 4.149 6 C -0.269 4.269 7 C 0.590 3.410 8 O -0.581 6.581 9 N -0.711 5.711 10 C 0.113 3.887 11 C 0.082 3.918 12 F -0.192 7.192 13 C -0.135 4.135 14 C -0.117 4.117 15 H 0.092 0.908 16 C 0.083 3.917 17 O -0.594 6.594 18 C -0.143 4.143 19 C 0.065 3.935 20 O -0.166 6.166 21 H 0.406 0.594 22 H 0.122 0.878 23 H -0.305 1.305 24 H -0.267 1.267 25 H 0.147 0.853 26 H 0.415 0.585 27 H 0.094 0.906 28 H 0.074 0.926 29 H 0.091 0.909 30 H 0.124 0.876 31 H 0.057 0.943 32 H 0.056 0.944 33 H 0.397 0.603 34 H 0.112 0.888 35 H 0.082 0.918 36 H 0.261 0.739 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.062 2.557 -0.780 5.724 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.370 6.370 2 C -0.157 4.157 3 Si 0.688 3.312 4 C -0.063 4.063 5 C -0.169 4.169 6 C -0.274 4.274 7 C 0.379 3.621 8 O -0.463 6.463 9 N -0.363 5.363 10 C -0.011 4.011 11 C 0.064 3.936 12 F -0.172 7.172 13 C -0.173 4.173 14 C -0.135 4.135 15 H 0.110 0.890 16 C 0.005 3.995 17 O -0.403 6.403 18 C -0.180 4.180 19 C -0.005 4.005 20 O -0.061 6.061 21 H 0.258 0.742 22 H 0.140 0.860 23 H -0.232 1.232 24 H -0.193 1.193 25 H 0.165 0.835 26 H 0.252 0.748 27 H 0.113 0.887 28 H 0.093 0.907 29 H 0.110 0.890 30 H 0.143 0.857 31 H 0.075 0.925 32 H 0.075 0.925 33 H 0.247 0.753 34 H 0.131 0.869 35 H 0.101 0.899 36 H 0.277 0.723 Dipole moment (debyes) X Y Z Total from point charges 4.032 2.531 -0.879 4.841 hybrid contribution -0.449 -0.094 0.186 0.495 sum 3.583 2.437 -0.693 4.388 Atomic orbital electron populations 1.86515 1.17587 1.81062 1.51788 1.24166 0.84588 1.13301 0.93694 0.93551 0.89979 0.70553 0.77114 1.21382 0.99057 0.92520 0.93385 1.22532 1.01742 0.96380 0.96238 1.21451 1.09850 0.95829 1.00242 1.17427 0.77866 0.86487 0.80295 1.90788 1.46402 1.38625 1.70438 1.45531 1.52700 1.15705 1.22378 1.21864 1.01144 0.86951 0.91094 1.22206 0.80160 0.97438 0.93817 1.92833 1.43090 1.86339 1.94959 1.23592 1.05915 0.95475 0.92292 1.22296 0.97002 0.96965 0.97287 0.89006 1.22127 0.95726 0.94610 0.87011 1.86409 1.38441 1.71613 1.43795 1.23666 1.01307 1.00208 0.92847 1.25280 0.97555 0.85389 0.92308 1.83692 1.54533 1.40120 1.27787 0.74151 0.86025 1.23239 1.19256 0.83498 0.74847 0.88749 0.90729 0.89044 0.85745 0.92456 0.92531 0.75264 0.86943 0.89898 0.72322 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -0.99 12.84 -148.98 -1.91 -2.90 16 2 C -0.05 0.05 2.97 71.24 0.21 0.26 16 3 Si 0.79 -2.31 32.09 68.60 2.20 -0.10 16 4 C -0.02 -0.06 6.24 24.76 0.15 0.10 16 5 C -0.15 -1.12 10.87 23.65 0.26 -0.86 16 6 C -0.27 -1.28 6.31 -18.99 -0.12 -1.40 16 7 C 0.59 4.36 7.81 86.65 0.68 5.03 16 8 O -0.58 -9.62 16.98 -4.06 -0.07 -9.69 16 9 N -0.71 0.20 5.47 -466.42 -2.55 -2.35 16 10 C 0.11 -0.13 5.35 86.38 0.46 0.33 16 11 C 0.08 -0.31 1.63 -10.27 -0.02 -0.33 16 12 F -0.19 0.17 15.07 44.97 0.68 0.84 16 13 C -0.13 0.74 7.13 31.12 0.22 0.96 16 14 C -0.12 0.36 4.20 -10.27 -0.04 0.31 16 15 H 0.09 -0.17 8.14 -2.38 -0.02 -0.19 16 16 C 0.08 -0.17 6.66 71.98 0.48 0.31 16 17 O -0.59 -0.21 13.66 -148.98 -2.04 -2.25 16 18 C -0.14 0.60 7.07 31.12 0.22 0.82 16 19 C 0.07 -0.17 11.61 67.39 0.78 0.61 16 20 O -0.17 -0.13 8.89 4.47 0.04 -0.09 16 21 H 0.41 -3.08 8.74 -74.06 -0.65 -3.73 16 22 H 0.12 -0.76 7.96 -2.38 -0.02 -0.78 16 23 H -0.30 -1.82 7.11 99.48 0.71 -1.12 16 24 H -0.27 0.19 7.11 99.48 0.71 0.89 16 25 H 0.15 1.38 8.06 -2.91 -0.02 1.35 16 26 H 0.41 -2.52 7.20 -92.71 -0.67 -3.18 16 27 H 0.09 -0.12 7.98 -2.39 -0.02 -0.14 16 28 H 0.07 0.08 8.14 -2.39 -0.02 0.06 16 29 H 0.09 -0.52 8.10 -2.39 -0.02 -0.54 16 30 H 0.12 -1.02 8.10 -2.39 -0.02 -1.04 16 31 H 0.06 -0.12 6.31 -2.39 -0.02 -0.14 16 32 H 0.06 -0.20 8.14 -2.39 -0.02 -0.22 16 33 H 0.40 -3.08 9.12 -74.06 -0.68 -3.75 16 34 H 0.11 -0.64 7.99 -2.39 -0.02 -0.66 16 35 H 0.08 -0.27 8.10 -2.39 -0.02 -0.29 16 36 H 0.26 -3.53 7.47 -2.91 -0.02 -3.55 16 Total: 0.00 -26.26 316.61 -1.17 -27.43 By element: Atomic # 1 Polarization: -16.22 SS G_CDS: -0.81 Total: -17.03 kcal Atomic # 6 Polarization: 2.86 SS G_CDS: 3.29 Total: 6.15 kcal Atomic # 7 Polarization: 0.20 SS G_CDS: -2.55 Total: -2.35 kcal Atomic # 8 Polarization: -10.96 SS G_CDS: -3.98 Total: -14.93 kcal Atomic # 9 Polarization: 0.17 SS G_CDS: 0.68 Total: 0.84 kcal Atomic # 14 Polarization: -2.31 SS G_CDS: 2.20 Total: -0.10 kcal Total: -26.26 -1.17 -27.43 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16500644_13456056.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -91.702 kcal (2) G-P(sol) polarization free energy of solvation -26.261 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -117.963 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.172 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -27.433 kcal (6) G-S(sol) free energy of system = (1) + (5) -119.134 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.57 seconds