Wall clock time and date at job start Sun Mar 7 2021 09:03:01 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50697 * 1 3 3 C 1.37875 * 126.45513 * 2 1 4 4 C 1.46673 * 126.23420 * 0.03517 * 3 2 1 5 5 O 1.21694 * 120.00341 * 359.97438 * 4 3 2 6 6 N 1.34786 * 120.00085 * 179.97438 * 4 3 2 7 7 C 1.46488 * 119.99973 * 179.97438 * 6 4 3 8 8 C 1.53005 * 109.46994 * 179.97438 * 7 6 4 9 9 F 1.39896 * 112.84793 * 314.66819 * 8 7 6 10 10 C 1.53781 * 113.61152 * 85.86565 * 8 7 6 11 11 C 1.54049 * 86.98555 * 89.16256 * 10 8 7 12 12 H 1.09001 * 113.68991 * 270.86917 * 11 10 8 13 13 C 1.53008 * 113.61938 * 139.98007 * 11 10 8 14 14 O 1.42903 * 109.47070 * 87.50109 * 13 11 10 15 15 C 1.53775 * 87.08003 * 25.42873 * 11 10 8 16 16 N 1.37654 * 107.53127 * 179.97438 * 3 2 1 17 17 C 1.35532 * 108.64667 * 359.97438 * 16 3 2 18 18 C 1.50695 * 125.56506 * 179.97438 * 17 16 3 19 19 O 1.42898 * 109.46955 * 120.03099 * 18 17 16 20 20 Si 1.86300 * 109.47389 * 0.03008 * 18 17 16 21 21 C 1.35459 * 108.86923 * 0.24534 * 17 16 3 22 22 H 1.09005 * 109.46961 * 89.99973 * 1 2 3 23 23 H 1.08999 * 109.47091 * 210.00361 * 1 2 3 24 24 H 1.09001 * 109.47572 * 330.00418 * 1 2 3 25 25 H 0.97003 * 119.99506 * 359.97438 * 6 4 3 26 26 H 1.09000 * 109.47556 * 299.99837 * 7 6 4 27 27 H 1.09000 * 109.47530 * 59.99623 * 7 6 4 28 28 H 1.09004 * 113.61021 * 203.66228 * 10 8 7 29 29 H 1.08997 * 113.61440 * 334.56832 * 10 8 7 30 30 H 1.08999 * 109.47059 * 207.50297 * 13 11 10 31 31 H 1.08998 * 109.46762 * 327.50091 * 13 11 10 32 32 H 0.96706 * 113.99456 * 180.02562 * 14 13 11 33 33 H 1.09005 * 113.61512 * 220.02128 * 15 11 10 34 34 H 1.09003 * 113.69212 * 89.13123 * 15 11 10 35 35 H 0.97005 * 125.67459 * 179.97438 * 16 3 2 36 36 H 1.09001 * 109.47545 * 240.02642 * 18 17 16 37 37 H 0.96700 * 113.99995 * 299.99800 * 19 18 17 38 38 H 1.48498 * 109.99998 * 179.97438 * 20 18 17 39 39 H 1.48498 * 109.99919 * 301.31690 * 20 18 17 40 40 H 1.07998 * 126.06440 * 179.71813 * 21 17 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3262 1.1090 0.0000 4 6 1.8898 2.5093 0.0007 5 8 0.7026 2.7766 0.0009 6 7 2.8036 3.5000 0.0012 7 6 2.3677 4.8985 0.0013 8 6 3.5932 5.8147 0.0025 9 9 4.5703 5.4137 0.9199 10 6 4.1483 6.1026 -1.4025 11 6 3.1844 7.3034 -1.4486 12 1 2.1993 7.0592 -1.8461 13 6 3.7913 8.5524 -2.0910 14 8 3.5857 8.5088 -3.5045 15 6 3.2443 7.3100 0.0880 16 7 3.6284 0.6625 0.0006 17 6 3.6218 -0.6928 0.0015 18 6 4.8434 -1.5752 0.0018 19 8 4.8349 -2.3998 1.1688 20 14 6.3753 -0.5150 0.0017 21 6 2.3379 -1.1247 -0.0039 22 1 -0.3633 0.0000 -1.0277 23 1 -0.3633 -0.8899 0.5139 24 1 -0.3634 0.8900 0.5138 25 1 3.7500 3.2869 0.0014 26 1 1.7693 5.0928 -0.8888 27 1 1.7688 5.0924 0.8911 28 1 5.2006 6.3870 -1.4063 29 1 3.9160 5.3261 -2.1313 30 1 3.3117 9.4413 -1.6813 31 1 4.8602 8.5864 -1.8803 32 1 3.9461 9.2710 -3.9781 33 1 2.2826 7.5076 0.5616 34 1 4.0493 7.9237 0.4923 35 1 4.4191 1.2245 0.0004 36 1 4.8371 -2.2048 -0.8879 37 1 4.8399 -1.9054 1.9999 38 1 7.5870 -1.3735 0.0026 39 1 6.3803 0.3701 -1.1907 40 1 2.0137 -2.1548 -0.0090 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16500644_13940406.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:03:01 Heat of formation + Delta-G solvation = -96.538525 kcal Electronic energy + Delta-G solvation = -24525.278897 eV Core-core repulsion = 20643.564303 eV Total energy + Delta-G solvation = -3881.714593 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 299.137 amu Computer time = 0.66 seconds Orbital eigenvalues (eV) -48.83802 -42.59361 -40.62848 -39.82373 -37.80196 -37.36657 -35.70268 -33.57820 -31.69240 -30.07814 -28.29206 -27.74826 -27.23887 -26.09391 -23.04846 -22.45651 -21.61055 -20.82946 -20.12340 -19.62625 -18.41540 -17.95549 -17.82076 -17.07897 -17.03408 -16.69121 -16.55495 -16.09032 -15.98073 -15.76968 -15.17658 -14.99633 -14.90753 -14.84245 -14.26399 -14.18212 -13.97873 -13.85745 -13.50245 -13.46601 -13.36529 -12.96433 -12.92423 -12.57108 -12.50881 -12.28598 -12.24161 -11.69496 -11.52364 -11.04097 -10.98503 -10.65033 -10.33200 -9.77347 -9.14248 -5.36222 0.33764 0.97119 1.28635 1.62359 1.69207 1.84004 1.95919 2.35171 2.80877 2.96166 3.06327 3.08177 3.26246 3.28410 3.58026 3.71778 3.77551 4.07757 4.16223 4.19817 4.23350 4.31336 4.32894 4.35193 4.42259 4.44529 4.49512 4.55518 4.70802 4.79660 4.83055 4.95375 5.04443 5.12256 5.15268 5.25168 5.48192 5.68266 5.93845 6.18270 6.35653 6.40793 6.53996 7.07701 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.093 4.093 2 C -0.066 4.066 3 C -0.054 4.054 4 C 0.593 3.407 5 O -0.519 6.519 6 N -0.732 5.732 7 C 0.122 3.878 8 C 0.078 3.922 9 F -0.196 7.196 10 C -0.147 4.147 11 C -0.108 4.108 12 H 0.108 0.892 13 C 0.086 3.914 14 O -0.573 6.573 15 C -0.140 4.140 16 N -0.535 5.535 17 C 0.016 3.984 18 C -0.037 4.037 19 O -0.531 6.531 20 Si 0.669 3.331 21 C -0.172 4.172 22 H 0.069 0.931 23 H 0.065 0.935 24 H 0.081 0.919 25 H 0.398 0.602 26 H 0.094 0.906 27 H 0.087 0.913 28 H 0.099 0.901 29 H 0.084 0.916 30 H 0.052 0.948 31 H 0.049 0.951 32 H 0.383 0.617 33 H 0.090 0.910 34 H 0.103 0.897 35 H 0.411 0.589 36 H 0.129 0.871 37 H 0.382 0.618 38 H -0.240 1.240 39 H -0.251 1.251 40 H 0.147 0.853 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.668 4.010 0.989 5.524 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.150 4.150 2 C -0.075 4.075 3 C -0.166 4.166 4 C 0.382 3.618 5 O -0.394 6.394 6 N -0.385 5.385 7 C -0.002 4.002 8 C 0.059 3.941 9 F -0.176 7.176 10 C -0.185 4.185 11 C -0.126 4.126 12 H 0.126 0.874 13 C 0.009 3.991 14 O -0.379 6.379 15 C -0.178 4.178 16 N -0.136 5.136 17 C -0.100 4.100 18 C -0.149 4.149 19 O -0.335 6.335 20 Si 0.569 3.431 21 C -0.197 4.197 22 H 0.087 0.913 23 H 0.084 0.916 24 H 0.100 0.900 25 H 0.232 0.768 26 H 0.112 0.888 27 H 0.105 0.895 28 H 0.117 0.883 29 H 0.103 0.897 30 H 0.070 0.930 31 H 0.068 0.932 32 H 0.230 0.770 33 H 0.109 0.891 34 H 0.122 0.878 35 H 0.250 0.750 36 H 0.146 0.854 37 H 0.229 0.771 38 H -0.164 1.164 39 H -0.175 1.175 40 H 0.165 0.835 Dipole moment (debyes) X Y Z Total from point charges 3.391 3.516 0.306 4.895 hybrid contribution 0.973 0.383 -0.368 1.109 sum 4.365 3.899 -0.062 5.853 Atomic orbital electron populations 1.20395 0.88873 1.03240 1.02514 1.20042 0.96084 0.90472 1.00856 1.20085 0.83398 0.93249 1.19832 1.16983 0.85680 0.82890 0.76285 1.90852 1.15774 1.83104 1.49693 1.45687 1.09789 1.05895 1.77097 1.21630 0.94507 0.79250 1.04779 1.22610 0.87298 0.95175 0.89020 1.92859 1.63864 1.92185 1.68689 1.23791 1.00829 0.99039 0.94823 1.22433 1.00650 0.94923 0.94629 0.87425 1.22109 0.98758 0.96859 0.81410 1.86486 1.83092 1.49299 1.19006 1.23590 1.04417 0.93689 0.96138 1.41997 1.07093 1.06410 1.58113 1.20878 0.97828 0.82584 1.08745 1.24507 1.00759 0.97471 0.92177 1.86557 1.96796 1.34965 1.15211 0.95459 0.77731 0.82489 0.87427 1.20641 0.90498 0.99132 1.09427 0.91263 0.91607 0.90018 0.76835 0.88793 0.89454 0.88297 0.89736 0.93002 0.93244 0.76985 0.89107 0.87842 0.74976 0.85429 0.77080 1.16386 1.17539 0.83482 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 -0.21 9.83 36.00 0.35 0.14 16 2 C -0.07 -0.18 6.21 -104.16 -0.65 -0.82 16 3 C -0.05 -0.10 7.06 -81.98 -0.58 -0.68 16 4 C 0.59 1.55 7.79 -12.85 -0.10 1.45 16 5 O -0.52 -2.93 14.80 5.19 0.08 -2.85 16 6 N -0.73 0.13 5.45 -61.62 -0.34 -0.21 16 7 C 0.12 -0.09 5.26 -4.05 -0.02 -0.11 16 8 C 0.08 -0.13 1.88 -89.80 -0.17 -0.30 16 9 F -0.20 0.00 16.67 2.25 0.04 0.04 16 10 C -0.15 0.28 7.09 -25.78 -0.18 0.10 16 11 C -0.11 0.22 3.66 -89.67 -0.33 -0.11 16 12 H 0.11 -0.15 7.70 -51.93 -0.40 -0.55 16 13 C 0.09 -0.18 6.89 37.16 0.26 0.08 16 14 O -0.57 0.23 13.66 -35.23 -0.48 -0.26 16 15 C -0.14 0.39 7.12 -25.92 -0.18 0.20 16 16 N -0.54 0.37 5.47 -5.70 -0.03 0.33 16 17 C 0.02 0.00 6.11 -81.95 -0.50 -0.50 16 18 C -0.04 0.05 2.98 36.00 0.11 0.16 16 19 O -0.53 0.40 12.87 -35.23 -0.45 -0.06 16 20 Si 0.67 -1.76 30.96 -169.99 -5.26 -7.02 16 21 C -0.17 -0.27 10.64 -39.98 -0.43 -0.70 16 22 H 0.07 0.15 8.14 -51.93 -0.42 -0.27 16 23 H 0.06 0.07 8.14 -51.93 -0.42 -0.36 16 24 H 0.08 0.30 6.48 -51.93 -0.34 -0.04 16 25 H 0.40 -0.83 7.21 -40.82 -0.29 -1.12 16 26 H 0.09 -0.06 7.37 -51.93 -0.38 -0.45 16 27 H 0.09 -0.03 8.14 -51.93 -0.42 -0.45 16 28 H 0.10 -0.21 7.90 -51.93 -0.41 -0.62 16 29 H 0.08 -0.12 8.10 -51.93 -0.42 -0.54 16 30 H 0.05 -0.15 8.14 -51.93 -0.42 -0.58 16 31 H 0.05 -0.14 7.85 -51.93 -0.41 -0.55 16 32 H 0.38 -1.69 9.12 45.56 0.42 -1.28 16 33 H 0.09 -0.31 8.10 -51.93 -0.42 -0.73 16 34 H 0.10 -0.33 8.10 -51.93 -0.42 -0.75 16 35 H 0.41 -1.34 5.98 -40.82 -0.24 -1.59 16 36 H 0.13 -0.15 7.96 -51.93 -0.41 -0.56 16 37 H 0.38 -1.69 8.70 45.56 0.40 -1.29 16 38 H -0.24 -0.16 7.11 56.52 0.40 0.24 16 39 H -0.25 0.18 7.11 56.52 0.40 0.59 16 40 H 0.15 0.13 8.06 -52.49 -0.42 -0.29 16 LS Contribution 337.82 15.07 5.09 5.09 Total: 0.00 -8.81 337.82 -8.43 -17.24 By element: Atomic # 1 Polarization: -6.55 SS G_CDS: -4.65 Total: -11.20 kcal Atomic # 6 Polarization: 1.32 SS G_CDS: -2.42 Total: -1.10 kcal Atomic # 7 Polarization: 0.49 SS G_CDS: -0.37 Total: 0.12 kcal Atomic # 8 Polarization: -2.31 SS G_CDS: -0.86 Total: -3.16 kcal Atomic # 9 Polarization: 0.00 SS G_CDS: 0.04 Total: 0.04 kcal Atomic # 14 Polarization: -1.76 SS G_CDS: -5.26 Total: -7.02 kcal Total LS contribution 5.09 Total: 5.09 kcal Total: -8.81 -8.43 -17.24 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16500644_13940406.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -79.300 kcal (2) G-P(sol) polarization free energy of solvation -8.809 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -88.109 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.430 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.239 kcal (6) G-S(sol) free energy of system = (1) + (5) -96.539 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.66 seconds