Wall clock time and date at job start Sun Mar 7 2021 09:03:04 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42902 * 1 3 3 Si 1.86293 * 109.47649 * 2 1 4 4 C 1.50699 * 109.46813 * 120.00114 * 2 1 3 5 5 C 1.34845 * 125.89423 * 244.95212 * 4 2 1 6 6 C 1.40893 * 107.41950 * 179.80378 * 5 4 2 7 7 C 1.34848 * 107.41627 * 0.38214 * 6 5 4 8 8 C 1.50703 * 125.88710 * 179.88260 * 7 6 5 9 9 C 1.50700 * 109.47148 * 274.68972 * 8 7 6 10 10 O 1.21283 * 119.99803 * 0.02562 * 9 8 7 11 11 N 1.34777 * 119.99675 * 180.28037 * 9 8 7 12 12 C 1.46497 * 119.99525 * 179.72583 * 11 9 8 13 13 C 1.52999 * 109.46992 * 179.97438 * 12 11 9 14 14 F 1.39900 * 112.84990 * 48.80271 * 13 12 11 15 15 C 1.53788 * 113.61730 * 180.02562 * 13 12 11 16 16 C 1.53777 * 87.08004 * 139.98149 * 15 13 12 17 17 H 1.09004 * 113.61165 * 220.01982 * 16 15 13 18 18 C 1.53001 * 113.61750 * 89.20432 * 16 15 13 19 19 O 1.42891 * 109.47339 * 174.99743 * 18 16 15 20 20 C 1.53775 * 87.08626 * 334.56643 * 16 15 13 21 21 N 1.36343 * 108.21931 * 359.62241 * 7 6 5 22 22 H 0.96705 * 113.99646 * 300.00873 * 1 2 3 23 23 H 1.09000 * 109.47020 * 239.99342 * 2 1 3 24 24 H 1.48499 * 110.00298 * 178.67878 * 3 2 1 25 25 H 1.48498 * 110.00005 * 300.00048 * 3 2 1 26 26 H 1.08007 * 126.28612 * 0.02562 * 5 4 2 27 27 H 1.08002 * 126.29239 * 180.24188 * 6 5 4 28 28 H 1.09009 * 109.46601 * 154.68994 * 8 7 6 29 29 H 1.08998 * 109.47035 * 34.69502 * 8 7 6 30 30 H 0.97000 * 119.99894 * 359.71837 * 11 9 8 31 31 H 1.08995 * 109.47421 * 299.99467 * 12 11 9 32 32 H 1.09001 * 109.47621 * 60.00103 * 12 11 9 33 33 H 1.08999 * 113.61018 * 254.53337 * 15 13 12 34 34 H 1.08998 * 113.60953 * 25.35038 * 15 13 12 35 35 H 1.09001 * 109.46637 * 294.99994 * 18 16 15 36 36 H 1.08994 * 109.46777 * 54.99240 * 18 16 15 37 37 H 0.96703 * 114.00053 * 179.97438 * 19 18 16 38 38 H 1.09005 * 113.61779 * 270.88891 * 20 16 15 39 39 H 1.08996 * 113.61815 * 139.98299 * 20 16 15 40 40 H 0.96995 * 125.63521 * 180.22709 * 21 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0502 1.7563 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 2.6308 -0.1490 2.2373 6 6 2.8940 -1.1598 3.1829 7 6 2.3526 -2.3022 2.7138 8 6 2.3929 -3.6447 3.3974 9 6 3.6795 -4.3477 3.0485 10 8 4.4847 -3.8111 2.3172 11 7 3.9330 -5.5747 3.5451 12 6 5.1810 -6.2605 3.2011 13 6 5.2197 -7.6255 3.8910 14 9 4.0410 -8.3578 3.7130 15 6 6.4962 -8.4302 3.5938 16 6 6.4769 -8.8567 5.0711 17 1 7.4643 -8.8781 5.5323 18 6 5.6723 -10.1320 5.3304 19 8 5.8087 -10.5107 6.7015 20 6 5.6935 -7.5638 5.3528 21 7 1.7575 -2.0321 1.5173 22 1 -0.3933 0.4418 0.7650 23 1 1.7923 -0.5139 -0.8899 24 1 3.5347 1.7701 0.0322 25 1 1.5617 2.4678 -1.2085 26 1 2.9308 0.8862 2.3078 27 1 3.4326 -1.0418 4.1116 28 1 1.5478 -4.2474 3.0645 29 1 2.3365 -3.5046 4.4768 30 1 3.2892 -6.0036 4.1302 31 1 5.2347 -6.3973 2.1211 32 1 6.0286 -5.6614 3.5340 33 1 6.3402 -9.2553 2.8989 34 1 7.3517 -7.8092 3.3284 35 1 4.6212 -9.9502 5.1065 36 1 6.0463 -10.9333 4.6932 37 1 5.3234 -11.3130 6.9381 38 1 6.3300 -6.7059 5.5696 39 1 4.8895 -7.6896 6.0780 40 1 1.2882 -2.6740 0.9618 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16500644_14644196.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:03:04 Heat of formation + Delta-G solvation = -94.697224 kcal Electronic energy + Delta-G solvation = -23930.890731 eV Core-core repulsion = 20049.255983 eV Total energy + Delta-G solvation = -3881.634749 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 299.137 amu Computer time = 0.63 seconds Orbital eigenvalues (eV) -49.00961 -42.27842 -40.61741 -39.85855 -37.67320 -37.26672 -35.57712 -33.23325 -31.85168 -30.57924 -29.14792 -27.26211 -26.88751 -25.01223 -23.01870 -21.92066 -21.28014 -20.99355 -20.25867 -19.06245 -18.63032 -18.25753 -17.57987 -17.17228 -16.94063 -16.68819 -16.32021 -16.19885 -15.90443 -15.51990 -15.33903 -15.20796 -14.78654 -14.51805 -14.44367 -14.17755 -13.99337 -13.89025 -13.73983 -13.63050 -13.45668 -13.31435 -12.77478 -12.58307 -12.00221 -11.93249 -11.88900 -11.67483 -11.44483 -10.97576 -10.86725 -10.58960 -10.22195 -9.70559 -8.89446 -4.94853 1.16435 1.29296 1.59243 1.74778 1.87892 2.01183 2.22298 2.51326 2.83099 2.95993 3.05894 3.14375 3.33418 3.48090 3.62633 3.74894 3.85047 3.92790 4.00170 4.09372 4.25788 4.32326 4.35046 4.38013 4.44354 4.45834 4.50037 4.54270 4.59999 4.69603 4.76267 4.83600 4.94323 5.10264 5.25511 5.32917 5.36402 6.06752 6.20827 6.33683 6.54852 6.58208 6.66969 7.14787 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.547 6.547 2 C -0.050 4.050 3 Si 0.720 3.280 4 C -0.010 4.010 5 C -0.187 4.187 6 C -0.173 4.173 7 C 0.035 3.965 8 C -0.071 4.071 9 C 0.512 3.488 10 O -0.523 6.523 11 N -0.731 5.731 12 C 0.114 3.886 13 C 0.077 3.923 14 F -0.185 7.185 15 C -0.142 4.142 16 C -0.111 4.111 17 H 0.096 0.904 18 C 0.085 3.915 19 O -0.573 6.573 20 C -0.145 4.145 21 N -0.536 5.536 22 H 0.381 0.619 23 H 0.109 0.891 24 H -0.255 1.255 25 H -0.256 1.256 26 H 0.142 0.858 27 H 0.137 0.863 28 H 0.101 0.899 29 H 0.119 0.881 30 H 0.404 0.596 31 H 0.079 0.921 32 H 0.090 0.910 33 H 0.087 0.913 34 H 0.110 0.890 35 H 0.058 0.942 36 H 0.050 0.950 37 H 0.383 0.617 38 H 0.104 0.896 39 H 0.086 0.914 40 H 0.412 0.588 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.828 -2.075 3.769 4.675 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.352 6.352 2 C -0.160 4.160 3 Si 0.620 3.380 4 C -0.124 4.124 5 C -0.212 4.212 6 C -0.198 4.198 7 C -0.078 4.078 8 C -0.112 4.112 9 C 0.298 3.702 10 O -0.397 6.397 11 N -0.385 5.385 12 C -0.011 4.011 13 C 0.059 3.941 14 F -0.165 7.165 15 C -0.180 4.180 16 C -0.130 4.130 17 H 0.115 0.885 18 C 0.007 3.993 19 O -0.379 6.379 20 C -0.183 4.183 21 N -0.130 5.130 22 H 0.229 0.771 23 H 0.127 0.873 24 H -0.179 1.179 25 H -0.181 1.181 26 H 0.160 0.840 27 H 0.155 0.845 28 H 0.119 0.881 29 H 0.137 0.863 30 H 0.239 0.761 31 H 0.097 0.903 32 H 0.108 0.892 33 H 0.106 0.894 34 H 0.129 0.871 35 H 0.076 0.924 36 H 0.069 0.931 37 H 0.230 0.770 38 H 0.123 0.877 39 H 0.104 0.896 40 H 0.249 0.751 Dipole moment (debyes) X Y Z Total from point charges -0.397 -0.976 2.148 2.393 hybrid contribution -0.836 -1.964 -0.182 2.143 sum -1.233 -2.940 1.966 3.746 Atomic orbital electron populations 1.86482 1.17403 1.81802 1.49505 1.24837 0.84880 1.10746 0.95571 0.94146 0.81051 0.76299 0.86483 1.20832 1.07264 0.84503 0.99759 1.20646 1.05449 0.99606 0.95458 1.20591 1.05766 0.91854 1.01542 1.19463 1.04138 0.95265 0.88948 1.20118 0.96208 0.92206 1.02649 1.20629 0.88568 0.80822 0.80172 1.90779 1.48173 1.65222 1.35555 1.45839 1.22041 1.18290 1.52281 1.21777 0.88115 0.90390 1.00770 1.22232 0.82888 0.90467 0.98541 1.92844 1.48932 1.78492 1.96218 1.23566 0.96785 1.00466 0.97166 1.22255 1.00908 0.93768 0.96029 0.88521 1.22058 0.99160 0.95084 0.82957 1.86447 1.75745 1.48926 1.26775 1.23657 1.01025 0.99060 0.94562 1.41800 1.44241 1.09158 1.17819 0.77114 0.87337 1.17925 1.18105 0.84040 0.84544 0.88115 0.86331 0.76094 0.90286 0.89187 0.89400 0.87147 0.92412 0.93144 0.76957 0.87725 0.89562 0.75129 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -0.35 12.88 -35.23 -0.45 -0.80 16 2 C -0.05 -0.04 3.08 36.01 0.11 0.07 16 3 Si 0.72 -0.21 30.60 -169.99 -5.20 -5.41 16 4 C -0.01 -0.02 6.50 -81.79 -0.53 -0.55 16 5 C -0.19 -0.37 9.37 -39.78 -0.37 -0.74 16 6 C -0.17 -0.40 10.76 -39.78 -0.43 -0.83 16 7 C 0.04 0.05 5.66 -81.79 -0.46 -0.41 16 8 C -0.07 0.10 6.24 -29.03 -0.18 -0.08 16 9 C 0.51 0.57 7.82 -10.98 -0.09 0.48 16 10 O -0.52 -3.01 16.03 5.55 0.09 -2.92 16 11 N -0.73 0.84 5.47 -60.30 -0.33 0.51 16 12 C 0.11 -0.11 5.37 -4.04 -0.02 -0.13 16 13 C 0.08 -0.13 1.66 -89.80 -0.15 -0.28 16 14 F -0.18 0.01 15.02 2.25 0.03 0.04 16 15 C -0.14 0.34 7.13 -25.92 -0.18 0.15 16 16 C -0.11 0.15 4.19 -89.81 -0.38 -0.23 16 17 H 0.10 -0.09 8.14 -51.93 -0.42 -0.51 16 18 C 0.09 -0.07 6.66 37.16 0.25 0.18 16 19 O -0.57 -0.18 13.66 -35.23 -0.48 -0.66 16 20 C -0.15 0.28 7.07 -25.92 -0.18 0.10 16 21 N -0.54 -0.79 6.08 -5.44 -0.03 -0.82 16 22 H 0.38 -1.19 8.70 45.56 0.40 -0.79 16 23 H 0.11 0.15 7.96 -51.93 -0.41 -0.26 16 24 H -0.25 -0.67 7.11 56.52 0.40 -0.26 16 25 H -0.26 -0.64 7.11 56.52 0.40 -0.24 16 26 H 0.14 0.01 6.24 -52.48 -0.33 -0.32 16 27 H 0.14 0.14 8.06 -52.49 -0.42 -0.28 16 28 H 0.10 -0.36 8.14 -51.92 -0.42 -0.78 16 29 H 0.12 -0.44 8.14 -51.93 -0.42 -0.87 16 30 H 0.40 -1.27 8.19 -40.82 -0.33 -1.61 16 31 H 0.08 0.01 8.14 -51.93 -0.42 -0.41 16 32 H 0.09 -0.09 7.94 -51.93 -0.41 -0.50 16 33 H 0.09 -0.21 8.10 -51.93 -0.42 -0.63 16 34 H 0.11 -0.40 8.10 -51.93 -0.42 -0.82 16 35 H 0.06 -0.04 6.32 -51.93 -0.33 -0.37 16 36 H 0.05 -0.08 8.14 -51.93 -0.42 -0.50 16 37 H 0.38 -1.44 9.12 45.56 0.42 -1.02 16 38 H 0.10 -0.29 7.96 -51.93 -0.41 -0.70 16 39 H 0.09 -0.12 8.10 -51.93 -0.42 -0.54 16 40 H 0.41 -0.03 8.96 -40.82 -0.37 -0.40 16 LS Contribution 339.92 15.07 5.12 5.12 Total: 0.00 -10.38 339.92 -8.65 -19.03 By element: Atomic # 1 Polarization: -7.04 SS G_CDS: -4.78 Total: -11.82 kcal Atomic # 6 Polarization: 0.35 SS G_CDS: -2.62 Total: -2.27 kcal Atomic # 7 Polarization: 0.04 SS G_CDS: -0.36 Total: -0.32 kcal Atomic # 8 Polarization: -3.54 SS G_CDS: -0.85 Total: -4.38 kcal Atomic # 9 Polarization: 0.01 SS G_CDS: 0.03 Total: 0.04 kcal Atomic # 14 Polarization: -0.21 SS G_CDS: -5.20 Total: -5.41 kcal Total LS contribution 5.12 Total: 5.12 kcal Total: -10.38 -8.65 -19.03 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16500644_14644196.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -75.664 kcal (2) G-P(sol) polarization free energy of solvation -10.381 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -86.045 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.652 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.033 kcal (6) G-S(sol) free energy of system = (1) + (5) -94.697 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.63 seconds