Wall clock time and date at job start Sun Mar 7 2021 09:03:06 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42905 * 1 3 3 Si 1.86295 * 109.47161 * 2 1 4 4 C 1.50698 * 109.47547 * 239.99744 * 2 1 3 5 5 C 1.31114 * 118.54810 * 120.00013 * 4 2 1 6 6 N 1.38914 * 121.84775 * 179.33975 * 5 4 2 7 7 C 1.47029 * 118.88711 * 13.29277 * 6 5 4 8 8 C 1.50704 * 109.82305 * 196.79799 * 7 6 5 9 9 O 1.21283 * 119.99837 * 20.00136 * 8 7 6 10 10 N 1.34774 * 120.00054 * 199.99773 * 8 7 6 11 11 C 1.46502 * 120.00123 * 180.02562 * 10 8 7 12 12 C 1.52999 * 109.46906 * 179.97438 * 11 10 8 13 13 F 1.39894 * 112.85369 * 316.19235 * 12 11 10 14 14 C 1.53781 * 113.61439 * 87.50461 * 12 11 10 15 15 C 1.53785 * 87.08158 * 89.11219 * 14 12 11 16 16 H 1.09003 * 113.61355 * 270.88759 * 15 14 12 17 17 C 1.53004 * 113.69057 * 139.99390 * 15 14 12 18 18 O 1.42893 * 109.47185 * 87.46409 * 17 15 14 19 19 C 1.53777 * 87.08184 * 25.43241 * 15 14 12 20 20 C 1.53548 * 107.65691 * 316.33482 * 7 6 5 21 21 C 1.50204 * 118.54519 * 299.73841 * 4 2 1 22 22 H 0.96693 * 113.99530 * 59.99912 * 1 2 3 23 23 H 1.09004 * 109.46745 * 119.99514 * 2 1 3 24 24 H 1.48502 * 110.00024 * 59.99946 * 3 2 1 25 25 H 1.48499 * 110.00288 * 181.31468 * 3 2 1 26 26 H 1.08000 * 119.07057 * 359.31408 * 5 4 2 27 27 H 0.97000 * 120.55802 * 193.31501 * 6 5 4 28 28 H 1.08997 * 109.82592 * 75.93992 * 7 6 5 29 29 H 0.97007 * 120.00176 * 359.97438 * 10 8 7 30 30 H 1.09002 * 109.46907 * 300.00249 * 11 10 8 31 31 H 1.08997 * 109.46622 * 60.00218 * 11 10 8 32 32 H 1.08996 * 113.61643 * 203.65907 * 14 12 11 33 33 H 1.09003 * 113.61418 * 334.56578 * 14 12 11 34 34 H 1.08996 * 109.46795 * 207.46662 * 17 15 14 35 35 H 1.09006 * 109.46806 * 327.46108 * 17 15 14 36 36 H 0.96703 * 114.00118 * 179.97438 * 18 17 15 37 37 H 1.08993 * 113.61906 * 220.01733 * 19 15 14 38 38 H 1.09007 * 113.69084 * 89.12650 * 19 15 14 39 39 H 1.09005 * 109.62020 * 180.66778 * 20 7 6 40 40 H 1.08997 * 109.62282 * 301.04066 * 20 7 6 41 41 H 1.09007 * 109.33032 * 320.58738 * 21 4 2 42 42 H 1.09002 * 109.33414 * 80.06601 * 21 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9315 -0.7104 -1.2304 5 6 2.6833 -0.0461 -2.0744 6 7 3.1945 -0.6371 -3.2230 7 6 2.6551 -1.9351 -3.6542 8 6 3.5959 -2.5771 -4.6410 9 8 4.7545 -2.2225 -4.6932 10 7 3.1497 -3.5455 -5.4655 11 6 4.0644 -4.1700 -6.4244 12 6 3.3116 -5.2295 -7.2315 13 9 2.4825 -6.0295 -6.4380 14 6 2.6162 -4.6707 -8.4841 15 6 3.9263 -4.9493 -9.2397 16 1 4.6307 -4.1179 -9.2135 17 6 3.7166 -5.5064 -10.6492 18 8 3.5747 -4.4250 -11.5725 19 6 4.2121 -6.0320 -8.1856 20 6 2.5233 -2.8220 -2.4077 21 6 1.5537 -2.1501 -1.4325 22 1 -0.3932 0.4417 -0.7650 23 1 1.7923 -0.5138 0.8901 24 1 1.5615 2.4679 1.2085 25 1 3.5346 1.7703 -0.0320 26 1 2.9112 0.9899 -1.8712 27 1 3.8957 -0.2009 -3.7318 28 1 1.6769 -1.7946 -4.1140 29 1 2.2231 -3.8294 -5.4234 30 1 4.4576 -3.4098 -7.0994 31 1 4.8881 -4.6402 -5.8873 32 1 1.7777 -5.2778 -8.8255 33 1 2.3710 -3.6111 -8.4114 34 1 4.5762 -6.1144 -10.9311 35 1 2.8159 -6.1201 -10.6670 36 1 3.4386 -4.7049 -12.4881 37 1 5.2551 -6.0714 -7.8718 38 1 3.8105 -7.0118 -8.4442 39 1 2.1358 -3.7999 -2.6935 40 1 3.4993 -2.9384 -1.9365 41 1 1.5873 -2.6698 -0.4749 42 1 0.5420 -2.2047 -1.8344 There are 56 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 56 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16500644_15413834.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:03:06 Heat of formation + Delta-G solvation = -119.495564 kcal Electronic energy + Delta-G solvation = -24900.087253 eV Core-core repulsion = 20990.065689 eV Total energy + Delta-G solvation = -3910.021564 eV No. of doubly occupied orbitals = 56 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 301.152 amu Computer time = 0.68 seconds Orbital eigenvalues (eV) -48.82943 -41.43995 -40.34291 -39.43111 -37.45113 -37.26066 -35.67722 -33.20664 -33.11911 -30.28397 -28.06511 -27.25566 -26.53386 -25.28480 -23.68687 -22.99679 -21.77039 -20.52809 -19.36596 -19.17214 -18.42313 -18.08065 -17.79042 -17.20172 -16.94800 -16.76634 -16.30355 -16.17959 -15.95332 -15.69650 -15.62574 -15.20133 -15.12324 -14.92579 -14.58003 -14.31704 -14.10778 -13.98496 -13.91177 -13.50555 -13.00884 -12.97183 -12.91389 -12.51745 -12.29225 -12.11759 -11.95851 -11.79814 -11.69728 -11.51889 -11.26509 -11.03808 -10.91222 -10.34645 -10.12754 -8.47536 -4.97804 1.30022 1.41366 1.46615 1.66083 1.73023 2.06997 2.56012 2.80346 2.95923 3.05399 3.07015 3.28245 3.45861 3.62311 3.72109 3.75676 3.82617 3.95011 4.06990 4.16069 4.21433 4.26380 4.34725 4.35986 4.39700 4.44004 4.48057 4.53932 4.58449 4.68741 4.70899 4.74397 4.82640 4.98429 5.10302 5.14306 5.19844 5.27631 5.53744 6.13085 6.31445 6.53625 6.76083 6.81309 6.97231 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.547 6.547 2 C -0.043 4.043 3 Si 0.670 3.330 4 C -0.279 4.279 5 C 0.141 3.859 6 N -0.732 5.732 7 C 0.139 3.861 8 C 0.514 3.486 9 O -0.529 6.529 10 N -0.723 5.723 11 C 0.120 3.880 12 C 0.079 3.921 13 F -0.195 7.195 14 C -0.145 4.145 15 C -0.108 4.108 16 H 0.107 0.893 17 C 0.086 3.914 18 O -0.573 6.573 19 C -0.142 4.142 20 C -0.128 4.128 21 C -0.050 4.050 22 H 0.375 0.625 23 H 0.104 0.896 24 H -0.258 1.258 25 H -0.261 1.261 26 H 0.133 0.867 27 H 0.409 0.591 28 H 0.093 0.907 29 H 0.408 0.592 30 H 0.093 0.907 31 H 0.084 0.916 32 H 0.099 0.901 33 H 0.085 0.915 34 H 0.051 0.949 35 H 0.050 0.950 36 H 0.383 0.617 37 H 0.089 0.911 38 H 0.103 0.897 39 H 0.079 0.921 40 H 0.075 0.925 41 H 0.073 0.927 42 H 0.070 0.930 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.079 -1.726 -5.841 6.436 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.352 6.352 2 C -0.155 4.155 3 Si 0.574 3.426 4 C -0.289 4.289 5 C 0.021 3.979 6 N -0.365 5.365 7 C 0.029 3.971 8 C 0.300 3.700 9 O -0.404 6.404 10 N -0.377 5.377 11 C -0.004 4.004 12 C 0.060 3.940 13 F -0.175 7.175 14 C -0.183 4.183 15 C -0.127 4.127 16 H 0.125 0.875 17 C 0.009 3.991 18 O -0.379 6.379 19 C -0.180 4.180 20 C -0.167 4.167 21 C -0.087 4.087 22 H 0.222 0.778 23 H 0.121 0.879 24 H -0.183 1.183 25 H -0.187 1.187 26 H 0.150 0.850 27 H 0.246 0.754 28 H 0.111 0.889 29 H 0.243 0.757 30 H 0.111 0.889 31 H 0.103 0.897 32 H 0.117 0.883 33 H 0.103 0.897 34 H 0.070 0.930 35 H 0.068 0.932 36 H 0.230 0.770 37 H 0.108 0.892 38 H 0.122 0.878 39 H 0.098 0.902 40 H 0.094 0.906 41 H 0.091 0.909 42 H 0.089 0.911 Dipole moment (debyes) X Y Z Total from point charges -0.659 -0.960 -4.363 4.516 hybrid contribution -0.124 -1.088 -0.444 1.182 sum -0.783 -2.049 -4.807 5.283 Atomic orbital electron populations 1.86470 1.17990 1.81615 1.49106 1.24712 0.84669 1.08373 0.97722 0.95194 0.80816 0.79110 0.87514 1.20985 1.11053 0.97393 0.99496 1.20344 0.95383 0.95532 0.86637 1.44261 1.43800 1.20372 1.28097 1.20970 0.95930 0.85757 0.94398 1.20635 0.88909 0.79601 0.80891 1.90750 1.18156 1.62267 1.69255 1.45746 1.14711 1.39342 1.37865 1.21640 0.92467 0.94595 0.91693 1.22575 0.91705 0.91085 0.88617 1.92867 1.73294 1.74813 1.76503 1.23732 0.98073 1.03170 0.93309 1.22385 0.98305 0.99287 0.92700 0.87516 1.22106 0.99858 0.88693 0.88474 1.86477 1.95991 1.34322 1.21118 1.23609 1.01142 0.99057 0.94165 1.21893 1.01831 0.98001 0.94986 1.19901 0.98009 0.91827 0.98960 0.77818 0.87897 1.18307 1.18666 0.85035 0.75424 0.88926 0.75703 0.88916 0.89734 0.88250 0.89654 0.93047 0.93193 0.76961 0.89241 0.87830 0.90199 0.90610 0.90866 0.91143 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -0.48 12.79 -35.23 -0.45 -0.93 16 2 C -0.04 -0.02 2.83 36.00 0.10 0.08 16 3 Si 0.67 -0.21 29.68 -169.99 -5.04 -5.25 16 4 C -0.28 -0.06 5.44 -101.34 -0.55 -0.61 16 5 C 0.14 -0.03 9.63 -16.09 -0.15 -0.18 16 6 N -0.73 -0.08 5.46 -55.34 -0.30 -0.38 16 7 C 0.14 -0.10 3.36 -68.51 -0.23 -0.33 16 8 C 0.51 0.40 7.08 -10.98 -0.08 0.32 16 9 O -0.53 -2.38 16.10 5.56 0.09 -2.29 16 10 N -0.72 0.91 5.45 -60.29 -0.33 0.58 16 11 C 0.12 -0.15 5.26 -4.04 -0.02 -0.17 16 12 C 0.08 -0.15 1.91 -89.80 -0.17 -0.32 16 13 F -0.19 -0.02 16.61 2.25 0.04 0.02 16 14 C -0.15 0.32 7.06 -25.92 -0.18 0.14 16 15 C -0.11 0.24 3.66 -89.81 -0.33 -0.09 16 16 H 0.11 -0.18 7.72 -51.93 -0.40 -0.58 16 17 C 0.09 -0.19 6.89 37.16 0.26 0.06 16 18 O -0.57 0.36 13.66 -35.23 -0.48 -0.13 16 19 C -0.14 0.40 7.12 -25.92 -0.18 0.21 16 20 C -0.13 0.07 5.47 -26.42 -0.14 -0.08 16 21 C -0.05 0.00 5.75 -28.10 -0.16 -0.16 16 22 H 0.38 -1.14 8.70 45.56 0.40 -0.75 16 23 H 0.10 0.15 7.96 -51.93 -0.41 -0.26 16 24 H -0.26 -0.83 7.11 56.52 0.40 -0.43 16 25 H -0.26 -0.57 7.10 56.52 0.40 -0.17 16 26 H 0.13 -0.22 4.37 -52.49 -0.23 -0.45 16 27 H 0.41 0.11 8.12 -40.82 -0.33 -0.22 16 28 H 0.09 -0.23 8.14 -51.93 -0.42 -0.65 16 29 H 0.41 -1.20 8.03 -40.82 -0.33 -1.53 16 30 H 0.09 -0.11 7.39 -51.93 -0.38 -0.49 16 31 H 0.08 -0.04 8.14 -51.93 -0.42 -0.46 16 32 H 0.10 -0.23 7.90 -51.93 -0.41 -0.64 16 33 H 0.08 -0.17 8.10 -51.93 -0.42 -0.60 16 34 H 0.05 -0.16 8.14 -51.93 -0.42 -0.58 16 35 H 0.05 -0.15 7.85 -51.93 -0.41 -0.56 16 36 H 0.38 -1.77 9.12 45.56 0.42 -1.36 16 37 H 0.09 -0.30 8.10 -51.93 -0.42 -0.72 16 38 H 0.10 -0.33 8.10 -51.93 -0.42 -0.75 16 39 H 0.08 -0.15 8.14 -51.93 -0.42 -0.58 16 40 H 0.08 0.10 8.14 -51.93 -0.42 -0.32 16 41 H 0.07 0.04 8.14 -51.92 -0.42 -0.38 16 42 H 0.07 -0.05 8.14 -51.93 -0.42 -0.47 16 LS Contribution 343.87 15.07 5.18 5.18 Total: 0.00 -8.59 343.87 -8.66 -17.25 By element: Atomic # 1 Polarization: -7.43 SS G_CDS: -5.51 Total: -12.94 kcal Atomic # 6 Polarization: 0.74 SS G_CDS: -1.85 Total: -1.11 kcal Atomic # 7 Polarization: 0.83 SS G_CDS: -0.63 Total: 0.20 kcal Atomic # 8 Polarization: -2.50 SS G_CDS: -0.84 Total: -3.34 kcal Atomic # 9 Polarization: -0.02 SS G_CDS: 0.04 Total: 0.02 kcal Atomic # 14 Polarization: -0.21 SS G_CDS: -5.04 Total: -5.25 kcal Total LS contribution 5.18 Total: 5.18 kcal Total: -8.59 -8.66 -17.25 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16500644_15413834.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -102.248 kcal (2) G-P(sol) polarization free energy of solvation -8.587 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -110.835 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.661 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.248 kcal (6) G-S(sol) free energy of system = (1) + (5) -119.496 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.68 seconds