Wall clock time and date at job start Sun Mar 7 2021 09:03:09 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42897 * 1 3 3 Si 1.86304 * 109.47052 * 2 1 4 4 C 1.50697 * 109.47456 * 120.00151 * 2 1 3 5 5 C 1.31121 * 118.54634 * 249.98314 * 4 2 1 6 6 N 1.38918 * 121.84440 * 180.42535 * 5 4 2 7 7 C 1.47030 * 118.88968 * 346.68037 * 6 5 4 8 8 C 1.53547 * 107.65537 * 43.66605 * 7 6 5 9 9 C 1.50202 * 118.54707 * 69.99636 * 4 2 1 10 10 C 1.50706 * 109.32824 * 39.67332 * 9 4 2 11 11 O 1.21279 * 120.00072 * 120.85928 * 10 9 4 12 12 N 1.34777 * 119.99762 * 300.85723 * 10 9 4 13 13 C 1.46496 * 120.00258 * 179.97438 * 12 10 9 14 14 C 1.52993 * 109.47551 * 180.02562 * 13 12 10 15 15 F 1.39902 * 112.84788 * 48.80631 * 14 13 12 16 16 C 1.53777 * 113.61655 * 180.02562 * 14 13 12 17 17 C 1.53784 * 87.08369 * 139.98342 * 16 14 13 18 18 H 1.08995 * 113.61281 * 219.93578 * 17 16 14 19 19 C 1.52995 * 113.61431 * 89.11546 * 17 16 14 20 20 O 1.42900 * 109.47213 * 175.00549 * 19 17 16 21 21 C 1.53779 * 113.61505 * 277.50202 * 14 13 12 22 22 H 0.96699 * 114.00041 * 300.00029 * 1 2 3 23 23 H 1.09005 * 109.47260 * 239.99846 * 2 1 3 24 24 H 1.48498 * 109.99932 * 178.67906 * 3 2 1 25 25 H 1.48492 * 109.99853 * 300.00093 * 3 2 1 26 26 H 1.07994 * 119.07223 * 0.42136 * 5 4 2 27 27 H 0.97008 * 120.55947 * 166.70452 * 6 5 4 28 28 H 1.09000 * 109.82288 * 284.12789 * 7 6 5 29 29 H 1.09002 * 109.87498 * 163.23186 * 7 6 5 30 30 H 1.09004 * 109.62013 * 179.32912 * 8 7 6 31 31 H 1.08997 * 109.62180 * 58.77219 * 8 7 6 32 32 H 1.08996 * 109.19526 * 280.09925 * 9 4 2 33 33 H 0.96999 * 120.00047 * 0.02562 * 12 10 9 34 34 H 1.09000 * 109.47024 * 300.00478 * 13 12 10 35 35 H 1.09004 * 109.46875 * 60.00324 * 13 12 10 36 36 H 1.09006 * 113.61530 * 254.52993 * 16 14 13 37 37 H 1.08999 * 113.61296 * 25.35265 * 16 14 13 38 38 H 1.09005 * 109.47307 * 295.00422 * 19 17 16 39 39 H 1.09001 * 109.47203 * 55.00313 * 19 17 16 40 40 H 0.96703 * 113.99989 * 180.02562 * 20 19 17 41 41 H 1.08995 * 113.61495 * 334.56321 * 21 14 13 42 42 H 1.09005 * 113.61626 * 105.47161 * 21 14 13 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7104 1.2304 5 6 2.5120 -0.0028 2.1693 6 7 3.0079 -0.5883 3.3274 7 6 2.6238 -1.9716 3.6447 8 6 2.7182 -2.7899 2.3489 9 6 1.7452 -2.1977 1.3268 10 6 1.9984 -2.8206 -0.0219 11 8 2.8698 -3.6542 -0.1510 12 7 1.2563 -2.4513 -1.0847 13 6 1.5028 -3.0563 -2.3959 14 6 0.5319 -2.4662 -3.4206 15 9 0.4850 -1.0685 -3.3822 16 6 0.7081 -3.0384 -4.8370 17 6 -0.8260 -3.0355 -4.9441 18 1 -1.2303 -3.9148 -5.4453 19 6 -1.3999 -1.7254 -5.4874 20 8 -2.8122 -1.8592 -5.6595 21 6 -0.8545 -3.1314 -3.4099 22 1 -0.3933 0.4417 0.7650 23 1 1.7923 -0.5139 -0.8900 24 1 3.5345 1.7703 0.0322 25 1 1.5614 2.4679 -1.2084 26 1 2.6073 1.0649 2.0385 27 1 3.5974 -0.0926 3.9171 28 1 1.6016 -1.9940 4.0224 29 1 3.3029 -2.3827 4.3917 30 1 2.4506 -3.8272 2.5507 31 1 3.7345 -2.7406 1.9580 32 1 0.7223 -2.4115 1.6366 33 1 0.5596 -1.7844 -0.9816 34 1 2.5272 -2.8488 -2.7051 35 1 1.3537 -4.1343 -2.3325 36 1 1.1954 -2.3507 -5.5283 37 1 1.1463 -4.0363 -4.8533 38 1 -1.1944 -0.9190 -4.7834 39 1 -0.9370 -1.4964 -6.4473 40 1 -3.2436 -1.0646 -6.0024 41 1 -0.8447 -4.1553 -3.0362 42 1 -1.6293 -2.5188 -2.9487 There are 56 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 56 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16500644_15608500.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:03:09 Heat of formation + Delta-G solvation = -108.764468 kcal Electronic energy + Delta-G solvation = -26430.991305 eV Core-core repulsion = 22521.435076 eV Total energy + Delta-G solvation = -3909.556229 eV No. of doubly occupied orbitals = 56 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 301.152 amu Computer time = 0.69 seconds Orbital eigenvalues (eV) -48.83655 -41.47729 -39.95736 -39.14253 -37.72496 -37.14326 -35.39500 -33.53709 -32.75817 -30.22860 -27.57989 -27.12241 -26.85207 -25.38104 -23.30380 -22.81761 -21.61926 -20.16159 -19.43156 -19.05240 -18.52298 -18.07692 -17.44781 -17.19697 -17.03368 -16.87621 -16.23776 -15.98136 -15.91081 -15.42418 -15.41187 -15.18304 -15.08536 -14.69324 -14.39009 -14.36250 -14.03910 -13.81927 -13.52217 -13.38891 -13.24645 -13.17895 -12.67247 -12.45865 -12.15165 -11.95520 -11.83336 -11.79921 -11.56141 -11.42604 -11.30272 -10.81825 -10.63166 -10.32762 -9.88844 -8.55559 -5.03852 1.17781 1.34175 1.64971 1.83579 2.04606 2.24778 2.49334 2.93935 3.08587 3.20514 3.27852 3.44933 3.45941 3.63845 3.76894 3.86119 3.97972 4.18062 4.21592 4.24266 4.35194 4.36853 4.42701 4.48241 4.52086 4.56505 4.58123 4.63690 4.66079 4.73311 4.78773 4.80802 4.90238 5.06913 5.14372 5.23193 5.28299 5.36295 5.49352 6.19896 6.53444 6.67172 6.71576 6.74583 7.36038 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.548 6.548 2 C -0.067 4.067 3 Si 0.669 3.331 4 C -0.285 4.285 5 C 0.162 3.838 6 N -0.748 5.748 7 C 0.120 3.880 8 C -0.121 4.121 9 C -0.035 4.035 10 C 0.525 3.475 11 O -0.542 6.542 12 N -0.730 5.730 13 C 0.107 3.893 14 C 0.078 3.922 15 F -0.182 7.182 16 C -0.142 4.142 17 C -0.110 4.110 18 H 0.096 0.904 19 C 0.085 3.915 20 O -0.573 6.573 21 C -0.145 4.145 22 H 0.380 0.620 23 H 0.120 0.880 24 H -0.261 1.261 25 H -0.255 1.255 26 H 0.134 0.866 27 H 0.404 0.596 28 H 0.064 0.936 29 H 0.083 0.917 30 H 0.081 0.919 31 H 0.079 0.921 32 H 0.099 0.901 33 H 0.419 0.581 34 H 0.078 0.922 35 H 0.088 0.912 36 H 0.086 0.914 37 H 0.110 0.890 38 H 0.059 0.941 39 H 0.049 0.951 40 H 0.382 0.618 41 H 0.103 0.897 42 H 0.087 0.913 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.601 2.863 3.547 4.831 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.354 6.354 2 C -0.178 4.178 3 Si 0.571 3.429 4 C -0.296 4.296 5 C 0.040 3.960 6 N -0.378 5.378 7 C -0.004 4.004 8 C -0.160 4.160 9 C -0.057 4.057 10 C 0.311 3.689 11 O -0.419 6.419 12 N -0.388 5.388 13 C -0.017 4.017 14 C 0.059 3.941 15 F -0.162 7.162 16 C -0.180 4.180 17 C -0.128 4.128 18 H 0.114 0.886 19 C 0.007 3.993 20 O -0.378 6.378 21 C -0.183 4.183 22 H 0.228 0.772 23 H 0.137 0.863 24 H -0.186 1.186 25 H -0.180 1.180 26 H 0.150 0.850 27 H 0.238 0.762 28 H 0.082 0.918 29 H 0.102 0.898 30 H 0.100 0.900 31 H 0.098 0.902 32 H 0.116 0.884 33 H 0.260 0.740 34 H 0.096 0.904 35 H 0.106 0.894 36 H 0.105 0.895 37 H 0.128 0.872 38 H 0.077 0.923 39 H 0.068 0.932 40 H 0.230 0.770 41 H 0.121 0.879 42 H 0.105 0.895 Dipole moment (debyes) X Y Z Total from point charges -0.344 1.865 2.730 3.324 hybrid contribution -0.052 0.630 -0.271 0.688 sum -0.397 2.495 2.459 3.525 Atomic orbital electron populations 1.86341 1.17832 1.81606 1.49655 1.25131 0.84873 1.09376 0.98457 0.95502 0.81128 0.78382 0.87854 1.20553 1.15912 0.94134 0.99029 1.20329 0.93521 0.95660 0.86517 1.44607 1.54121 1.14582 1.24443 1.21650 1.00652 0.81408 0.96706 1.21745 1.00567 0.99287 0.94410 1.19657 1.01403 0.92363 0.92231 1.20618 0.80824 0.81443 0.85986 1.90701 1.32526 1.33196 1.85478 1.46514 1.39275 1.44946 1.08107 1.21796 0.99135 0.98691 0.82103 1.22199 0.98044 0.76686 0.97162 1.92857 1.97198 1.29005 1.97178 1.23573 0.96495 1.03323 0.94634 1.22238 0.95011 0.99180 0.96420 0.88597 1.22068 0.81428 0.96349 0.99448 1.86445 1.20394 1.42200 1.88805 1.23635 0.95561 1.02359 0.96720 0.77202 0.86332 1.18588 1.18002 0.84964 0.76165 0.91797 0.89830 0.90050 0.90200 0.88351 0.73973 0.90421 0.89351 0.89492 0.87207 0.92292 0.93238 0.77036 0.87884 0.89452 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 0.46 11.40 -35.23 -0.40 0.06 16 2 C -0.07 -0.01 1.69 36.00 0.06 0.05 16 3 Si 0.67 -0.34 29.73 -169.99 -5.05 -5.40 16 4 C -0.29 0.03 5.03 -101.34 -0.51 -0.48 16 5 C 0.16 -0.23 9.61 -16.09 -0.15 -0.39 16 6 N -0.75 1.62 5.83 -60.68 -0.35 1.27 16 7 C 0.12 -0.25 7.16 -3.47 -0.02 -0.27 16 8 C -0.12 -0.06 4.91 -26.43 -0.13 -0.19 16 9 C -0.04 -0.03 2.75 -93.14 -0.26 -0.29 16 10 C 0.52 1.89 6.85 -10.98 -0.08 1.81 16 11 O -0.54 -3.78 15.80 5.56 0.09 -3.69 16 12 N -0.73 -1.58 3.77 -60.30 -0.23 -1.81 16 13 C 0.11 0.15 5.36 -4.05 -0.02 0.13 16 14 C 0.08 0.04 1.66 -89.81 -0.15 -0.11 16 15 F -0.18 -0.48 15.01 2.25 0.03 -0.45 16 16 C -0.14 0.12 7.13 -25.92 -0.18 -0.06 16 17 C -0.11 -0.02 4.20 -89.82 -0.38 -0.40 16 18 H 0.10 0.03 8.14 -51.93 -0.42 -0.39 16 19 C 0.08 0.05 6.66 37.16 0.25 0.30 16 20 O -0.57 -0.86 13.66 -35.23 -0.48 -1.34 16 21 C -0.15 -0.02 7.07 -25.94 -0.18 -0.20 16 22 H 0.38 -1.78 8.70 45.56 0.40 -1.38 16 23 H 0.12 0.27 5.29 -51.93 -0.27 0.00 16 24 H -0.26 -0.60 7.11 56.52 0.40 -0.20 16 25 H -0.26 -0.79 7.11 56.52 0.40 -0.39 16 26 H 0.13 -0.45 4.49 -52.49 -0.24 -0.69 16 27 H 0.40 -1.62 8.96 -40.82 -0.37 -1.98 16 28 H 0.06 -0.16 8.14 -51.93 -0.42 -0.59 16 29 H 0.08 -0.28 8.14 -51.93 -0.42 -0.70 16 30 H 0.08 0.03 8.14 -51.93 -0.42 -0.40 16 31 H 0.08 0.22 7.77 -51.93 -0.40 -0.18 16 32 H 0.10 -0.01 8.14 -51.93 -0.42 -0.43 16 33 H 0.42 0.72 4.70 -40.82 -0.19 0.52 16 34 H 0.08 0.16 8.14 -51.93 -0.42 -0.27 16 35 H 0.09 0.07 7.94 -51.93 -0.41 -0.34 16 36 H 0.09 -0.09 8.10 -51.93 -0.42 -0.51 16 37 H 0.11 -0.26 8.10 -51.93 -0.42 -0.68 16 38 H 0.06 0.06 6.31 -51.93 -0.33 -0.26 16 39 H 0.05 -0.01 8.14 -51.93 -0.42 -0.44 16 40 H 0.38 -1.00 9.12 45.56 0.42 -0.58 16 41 H 0.10 -0.09 7.96 -51.93 -0.41 -0.51 16 42 H 0.09 0.10 8.10 -51.93 -0.42 -0.32 16 LS Contribution 332.02 15.07 5.00 5.00 Total: 0.00 -8.76 332.02 -8.38 -17.14 By element: Atomic # 1 Polarization: -5.47 SS G_CDS: -5.23 Total: -10.71 kcal Atomic # 6 Polarization: 1.67 SS G_CDS: -1.76 Total: -0.09 kcal Atomic # 7 Polarization: 0.04 SS G_CDS: -0.58 Total: -0.54 kcal Atomic # 8 Polarization: -4.18 SS G_CDS: -0.80 Total: -4.97 kcal Atomic # 9 Polarization: -0.48 SS G_CDS: 0.03 Total: -0.45 kcal Atomic # 14 Polarization: -0.34 SS G_CDS: -5.05 Total: -5.40 kcal Total LS contribution 5.00 Total: 5.00 kcal Total: -8.76 -8.38 -17.14 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16500644_15608500.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -91.621 kcal (2) G-P(sol) polarization free energy of solvation -8.763 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -100.383 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.381 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.144 kcal (6) G-S(sol) free energy of system = (1) + (5) -108.764 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.70 seconds