Wall clock time and date at job start Sun Mar 7 2021 09:03:09 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42897 * 1 3 3 Si 1.86304 * 109.47052 * 2 1 4 4 C 1.50697 * 109.47456 * 120.00151 * 2 1 3 5 5 C 1.31121 * 118.54634 * 249.98314 * 4 2 1 6 6 N 1.38918 * 121.84440 * 180.42535 * 5 4 2 7 7 C 1.47030 * 118.88968 * 346.68037 * 6 5 4 8 8 C 1.53547 * 107.65537 * 43.66605 * 7 6 5 9 9 C 1.50202 * 118.54707 * 69.99636 * 4 2 1 10 10 C 1.50706 * 109.32824 * 39.67332 * 9 4 2 11 11 O 1.21279 * 120.00072 * 120.85928 * 10 9 4 12 12 N 1.34777 * 119.99762 * 300.85723 * 10 9 4 13 13 C 1.46496 * 120.00258 * 179.97438 * 12 10 9 14 14 C 1.52993 * 109.47551 * 180.02562 * 13 12 10 15 15 F 1.39902 * 112.84788 * 48.80631 * 14 13 12 16 16 C 1.53777 * 113.61655 * 180.02562 * 14 13 12 17 17 C 1.53784 * 87.08369 * 139.98342 * 16 14 13 18 18 H 1.08995 * 113.61281 * 219.93578 * 17 16 14 19 19 C 1.52995 * 113.61431 * 89.11546 * 17 16 14 20 20 O 1.42900 * 109.47213 * 175.00549 * 19 17 16 21 21 C 1.53779 * 113.61505 * 277.50202 * 14 13 12 22 22 H 0.96699 * 114.00041 * 300.00029 * 1 2 3 23 23 H 1.09005 * 109.47260 * 239.99846 * 2 1 3 24 24 H 1.48498 * 109.99932 * 178.67906 * 3 2 1 25 25 H 1.48492 * 109.99853 * 300.00093 * 3 2 1 26 26 H 1.07994 * 119.07223 * 0.42136 * 5 4 2 27 27 H 0.97008 * 120.55947 * 166.70452 * 6 5 4 28 28 H 1.09000 * 109.82288 * 284.12789 * 7 6 5 29 29 H 1.09002 * 109.87498 * 163.23186 * 7 6 5 30 30 H 1.09004 * 109.62013 * 179.32912 * 8 7 6 31 31 H 1.08997 * 109.62180 * 58.77219 * 8 7 6 32 32 H 1.08996 * 109.19526 * 280.09925 * 9 4 2 33 33 H 0.96999 * 120.00047 * 0.02562 * 12 10 9 34 34 H 1.09000 * 109.47024 * 300.00478 * 13 12 10 35 35 H 1.09004 * 109.46875 * 60.00324 * 13 12 10 36 36 H 1.09006 * 113.61530 * 254.52993 * 16 14 13 37 37 H 1.08999 * 113.61296 * 25.35265 * 16 14 13 38 38 H 1.09005 * 109.47307 * 295.00422 * 19 17 16 39 39 H 1.09001 * 109.47203 * 55.00313 * 19 17 16 40 40 H 0.96703 * 113.99989 * 180.02562 * 20 19 17 41 41 H 1.08995 * 113.61495 * 334.56321 * 21 14 13 42 42 H 1.09005 * 113.61626 * 105.47161 * 21 14 13 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7104 1.2304 5 6 2.5120 -0.0028 2.1693 6 7 3.0079 -0.5883 3.3274 7 6 2.6238 -1.9716 3.6447 8 6 2.7182 -2.7899 2.3489 9 6 1.7452 -2.1977 1.3268 10 6 1.9984 -2.8206 -0.0219 11 8 2.8698 -3.6542 -0.1510 12 7 1.2563 -2.4513 -1.0847 13 6 1.5028 -3.0563 -2.3959 14 6 0.5319 -2.4662 -3.4206 15 9 0.4850 -1.0685 -3.3822 16 6 0.7081 -3.0384 -4.8370 17 6 -0.8260 -3.0355 -4.9441 18 1 -1.2303 -3.9148 -5.4453 19 6 -1.3999 -1.7254 -5.4874 20 8 -2.8122 -1.8592 -5.6595 21 6 -0.8545 -3.1314 -3.4099 22 1 -0.3933 0.4417 0.7650 23 1 1.7923 -0.5139 -0.8900 24 1 3.5345 1.7703 0.0322 25 1 1.5614 2.4679 -1.2084 26 1 2.6073 1.0649 2.0385 27 1 3.5974 -0.0926 3.9171 28 1 1.6016 -1.9940 4.0224 29 1 3.3029 -2.3827 4.3917 30 1 2.4506 -3.8272 2.5507 31 1 3.7345 -2.7406 1.9580 32 1 0.7223 -2.4115 1.6366 33 1 0.5596 -1.7844 -0.9816 34 1 2.5272 -2.8488 -2.7051 35 1 1.3537 -4.1343 -2.3325 36 1 1.1954 -2.3507 -5.5283 37 1 1.1463 -4.0363 -4.8533 38 1 -1.1944 -0.9190 -4.7834 39 1 -0.9370 -1.4964 -6.4473 40 1 -3.2436 -1.0646 -6.0024 41 1 -0.8447 -4.1553 -3.0362 42 1 -1.6293 -2.5188 -2.9487 There are 56 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 56 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16500644_15608500.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:03:09 Heat of formation + Delta-G solvation = -112.543937 kcal Electronic energy + Delta-G solvation = -26431.155195 eV Core-core repulsion = 22521.435076 eV Total energy + Delta-G solvation = -3909.720119 eV No. of doubly occupied orbitals = 56 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 301.152 amu Computer time = 0.78 seconds Orbital eigenvalues (eV) -48.97997 -41.60556 -39.98038 -39.22858 -37.69334 -37.20280 -35.59334 -33.53181 -32.70139 -30.31993 -27.61083 -27.12098 -26.84499 -25.37761 -23.26760 -22.88257 -21.81365 -20.19819 -19.40234 -19.02123 -18.56793 -18.17898 -17.56983 -17.16613 -17.11728 -16.94877 -16.30662 -16.06309 -15.93709 -15.51803 -15.47579 -15.26108 -15.07889 -14.67601 -14.49100 -14.39655 -14.17162 -13.87925 -13.58319 -13.48784 -13.23568 -13.21272 -12.60898 -12.50552 -12.26806 -11.98495 -11.91417 -11.83085 -11.62898 -11.36273 -11.34369 -10.92019 -10.79232 -10.35112 -10.06689 -8.45380 -5.05988 1.20342 1.33467 1.58645 1.63665 1.99349 2.12844 2.66189 2.95819 3.06216 3.17032 3.21174 3.43555 3.47232 3.69681 3.84339 3.86829 3.94315 4.15450 4.19821 4.30981 4.31711 4.36529 4.37748 4.48790 4.50685 4.55877 4.60105 4.63450 4.70313 4.78072 4.81136 4.85056 4.87838 5.03051 5.17054 5.21359 5.25262 5.33146 5.42888 6.30574 6.40018 6.79830 6.92013 6.97622 7.14795 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.558 6.558 2 C -0.067 4.067 3 Si 0.765 3.235 4 C -0.305 4.305 5 C 0.171 3.829 6 N -0.744 5.744 7 C 0.124 3.876 8 C -0.120 4.120 9 C -0.033 4.033 10 C 0.518 3.482 11 O -0.584 6.584 12 N -0.724 5.724 13 C 0.105 3.895 14 C 0.075 3.925 15 F -0.196 7.196 16 C -0.133 4.133 17 C -0.113 4.113 18 H 0.097 0.903 19 C 0.083 3.917 20 O -0.591 6.591 21 C -0.141 4.141 22 H 0.398 0.602 23 H 0.094 0.906 24 H -0.297 1.297 25 H -0.306 1.306 26 H 0.154 0.846 27 H 0.415 0.585 28 H 0.076 0.924 29 H 0.099 0.901 30 H 0.078 0.922 31 H 0.052 0.948 32 H 0.110 0.890 33 H 0.422 0.578 34 H 0.068 0.932 35 H 0.095 0.905 36 H 0.089 0.911 37 H 0.127 0.873 38 H 0.051 0.949 39 H 0.058 0.942 40 H 0.397 0.603 41 H 0.114 0.886 42 H 0.076 0.924 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.047 3.230 4.567 5.957 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.366 6.366 2 C -0.178 4.178 3 Si 0.674 3.326 4 C -0.316 4.316 5 C 0.048 3.952 6 N -0.374 5.374 7 C -0.001 4.001 8 C -0.159 4.159 9 C -0.054 4.054 10 C 0.306 3.694 11 O -0.464 6.464 12 N -0.381 5.381 13 C -0.019 4.019 14 C 0.057 3.943 15 F -0.176 7.176 16 C -0.171 4.171 17 C -0.131 4.131 18 H 0.115 0.885 19 C 0.005 3.995 20 O -0.400 6.400 21 C -0.179 4.179 22 H 0.249 0.751 23 H 0.111 0.889 24 H -0.225 1.225 25 H -0.235 1.235 26 H 0.170 0.830 27 H 0.251 0.749 28 H 0.094 0.906 29 H 0.118 0.882 30 H 0.097 0.903 31 H 0.071 0.929 32 H 0.127 0.873 33 H 0.264 0.736 34 H 0.086 0.914 35 H 0.113 0.887 36 H 0.108 0.892 37 H 0.145 0.855 38 H 0.069 0.931 39 H 0.077 0.923 40 H 0.247 0.753 41 H 0.133 0.867 42 H 0.094 0.906 Dipole moment (debyes) X Y Z Total from point charges -0.826 2.247 3.785 4.479 hybrid contribution 0.082 0.540 -0.633 0.836 sum -0.745 2.787 3.152 4.273 Atomic orbital electron populations 1.86303 1.17269 1.82053 1.51001 1.25077 0.85535 1.09577 0.97655 0.94565 0.77306 0.75573 0.85194 1.20433 1.17957 0.93506 0.99674 1.20558 0.91906 0.96512 0.86222 1.44698 1.53841 1.14596 1.24259 1.21688 1.01885 0.81007 0.95489 1.21710 0.98788 0.99849 0.95579 1.19687 1.02048 0.93005 0.90644 1.21196 0.80169 0.80870 0.87170 1.90669 1.34317 1.35164 1.86244 1.46547 1.38838 1.44556 1.08203 1.21859 0.98902 0.99103 0.82083 1.22299 0.98204 0.75918 0.97895 1.92829 1.97264 1.30228 1.97285 1.23600 0.95959 1.04202 0.93359 1.22266 0.95637 0.99006 0.96214 0.88472 1.22105 0.81250 0.96371 0.99730 1.86402 1.20898 1.43634 1.89039 1.23639 0.94721 1.02685 0.96856 0.75065 0.88912 1.22481 1.23497 0.82962 0.74851 0.90554 0.88238 0.90304 0.92910 0.87251 0.73635 0.91415 0.88731 0.89207 0.85461 0.93112 0.92336 0.75282 0.86726 0.90565 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 0.93 11.40 -148.98 -1.70 -0.77 16 2 C -0.07 -0.05 1.69 71.24 0.12 0.07 16 3 Si 0.77 -0.55 29.73 68.60 2.04 1.49 16 4 C -0.30 0.07 5.03 -16.77 -0.08 -0.02 16 5 C 0.17 -0.66 9.61 83.41 0.80 0.14 16 6 N -0.74 4.25 5.83 -345.89 -2.02 2.23 16 7 C 0.12 -0.64 7.16 86.46 0.62 -0.02 16 8 C -0.12 -0.19 4.91 30.79 0.15 -0.03 16 9 C -0.03 -0.08 2.75 -12.43 -0.03 -0.12 16 10 C 0.52 4.55 6.85 87.66 0.60 5.15 16 11 O -0.58 -9.42 15.80 -3.03 -0.05 -9.47 16 12 N -0.72 -4.18 3.77 -463.07 -1.75 -5.93 16 13 C 0.10 0.43 5.36 86.38 0.46 0.89 16 14 C 0.08 0.15 1.66 -10.27 -0.02 0.13 16 15 F -0.20 -1.29 15.01 44.97 0.68 -0.62 16 16 C -0.13 0.22 7.13 31.12 0.22 0.45 16 17 C -0.11 -0.05 4.20 -10.28 -0.04 -0.10 16 18 H 0.10 0.04 8.14 -2.39 -0.02 0.02 16 19 C 0.08 0.14 6.66 71.98 0.48 0.62 16 20 O -0.59 -1.93 13.66 -148.98 -2.04 -3.97 16 21 C -0.14 -0.11 7.07 31.11 0.22 0.11 16 22 H 0.40 -4.10 8.70 -74.06 -0.64 -4.74 16 23 H 0.09 0.57 5.29 -2.38 -0.01 0.56 16 24 H -0.30 -1.56 7.11 99.48 0.71 -0.85 16 25 H -0.31 -2.40 7.11 99.48 0.71 -1.69 16 26 H 0.15 -1.29 4.49 -2.91 -0.01 -1.30 16 27 H 0.41 -4.06 8.96 -92.70 -0.83 -4.89 16 28 H 0.08 -0.53 8.14 -2.39 -0.02 -0.55 16 29 H 0.10 -0.81 8.14 -2.39 -0.02 -0.82 16 30 H 0.08 0.13 8.14 -2.39 -0.02 0.11 16 31 H 0.05 0.38 7.77 -2.39 -0.02 0.36 16 32 H 0.11 -0.03 8.14 -2.39 -0.02 -0.05 16 33 H 0.42 1.95 4.70 -92.71 -0.44 1.51 16 34 H 0.07 0.41 8.14 -2.39 -0.02 0.39 16 35 H 0.09 0.25 7.94 -2.38 -0.02 0.23 16 36 H 0.09 -0.18 8.10 -2.38 -0.02 -0.20 16 37 H 0.13 -0.67 8.10 -2.39 -0.02 -0.69 16 38 H 0.05 0.16 6.31 -2.38 -0.02 0.14 16 39 H 0.06 -0.03 8.14 -2.39 -0.02 -0.05 16 40 H 0.40 -1.97 9.12 -74.06 -0.68 -2.64 16 41 H 0.11 -0.21 7.96 -2.39 -0.02 -0.23 16 42 H 0.08 0.24 8.10 -2.38 -0.02 0.22 16 Total: 0.00 -22.11 332.02 -2.79 -24.90 By element: Atomic # 1 Polarization: -13.69 SS G_CDS: -1.46 Total: -15.16 kcal Atomic # 6 Polarization: 3.78 SS G_CDS: 3.50 Total: 7.27 kcal Atomic # 7 Polarization: 0.07 SS G_CDS: -3.76 Total: -3.69 kcal Atomic # 8 Polarization: -10.42 SS G_CDS: -3.78 Total: -14.20 kcal Atomic # 9 Polarization: -1.29 SS G_CDS: 0.68 Total: -0.62 kcal Atomic # 14 Polarization: -0.55 SS G_CDS: 2.04 Total: 1.49 kcal Total: -22.11 -2.79 -24.90 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16500644_15608500.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -87.642 kcal (2) G-P(sol) polarization free energy of solvation -22.107 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -109.749 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.795 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.902 kcal (6) G-S(sol) free energy of system = (1) + (5) -112.544 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.79 seconds