Wall clock time and date at job start Sun Mar 7 2021 09:03:12 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42905 * 1 3 3 Si 1.86298 * 109.46902 * 2 1 4 4 C 1.50701 * 109.47186 * 120.00039 * 2 1 3 5 5 C 1.34494 * 125.49153 * 209.97776 * 4 2 1 6 6 C 1.46754 * 106.36136 * 180.02562 * 5 4 2 7 7 C 1.47261 * 126.96529 * 179.97438 * 6 5 4 8 8 O 1.21626 * 120.00190 * 180.02562 * 7 6 5 9 9 N 1.34778 * 120.00035 * 0.02636 * 7 6 5 10 10 C 1.46504 * 119.99906 * 180.02562 * 9 7 6 11 11 C 1.52999 * 109.47225 * 180.02562 * 10 9 7 12 12 F 1.39905 * 112.84658 * 314.66505 * 11 10 9 13 13 C 1.53780 * 113.61453 * 85.85878 * 11 10 9 14 14 C 1.53965 * 87.01838 * 89.23383 * 13 11 10 15 15 H 1.08994 * 113.60972 * 270.80039 * 14 13 11 16 16 C 1.52994 * 113.66573 * 139.93314 * 14 13 11 17 17 O 1.42895 * 109.47220 * 87.43999 * 16 14 13 18 18 C 1.53781 * 113.61565 * 183.47023 * 11 10 9 19 19 C 1.36333 * 106.06363 * 0.25239 * 6 5 4 20 20 C 1.50996 * 126.78740 * 179.80400 * 19 6 5 21 21 C 1.53402 * 108.24478 * 164.25403 * 20 19 6 22 22 C 1.53165 * 109.03770 * 48.48260 * 21 20 19 23 23 C 1.53374 * 109.31167 * 290.19269 * 22 21 20 24 24 N 1.35220 * 108.65957 * 359.59402 * 19 6 5 25 25 H 0.96698 * 114.00304 * 299.99893 * 1 2 3 26 26 H 1.08994 * 109.47054 * 240.00021 * 2 1 3 27 27 H 1.48504 * 110.00053 * 300.00132 * 3 2 1 28 28 H 1.48499 * 109.99986 * 61.31557 * 3 2 1 29 29 H 1.07994 * 126.81709 * 0.02562 * 5 4 2 30 30 H 0.96999 * 120.00448 * 359.97438 * 9 7 6 31 31 H 1.09000 * 109.47232 * 60.00093 * 10 9 7 32 32 H 1.09006 * 109.47127 * 300.00015 * 10 9 7 33 33 H 1.09000 * 113.61461 * 203.74816 * 13 11 10 34 34 H 1.08995 * 113.61894 * 334.65553 * 13 11 10 35 35 H 1.09002 * 109.46642 * 207.43997 * 16 14 13 36 36 H 1.08998 * 109.47556 * 327.43760 * 16 14 13 37 37 H 0.96703 * 114.00252 * 179.97438 * 17 16 14 38 38 H 1.09001 * 113.61695 * 25.34545 * 18 11 10 39 39 H 1.08997 * 113.61223 * 156.25127 * 18 11 10 40 40 H 1.09001 * 109.71101 * 283.93798 * 20 19 6 41 41 H 1.08993 * 109.71080 * 44.52851 * 20 19 6 42 42 H 1.09001 * 109.54065 * 168.34944 * 21 20 19 43 43 H 1.08995 * 109.54459 * 288.52823 * 21 20 19 44 44 H 1.08999 * 109.46250 * 50.44616 * 22 21 20 45 45 H 1.09000 * 109.45622 * 170.42079 * 22 21 20 46 46 H 1.08996 * 110.13253 * 291.24022 * 23 22 21 47 47 H 1.09004 * 109.09315 * 170.84706 * 23 22 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7104 1.2305 5 6 3.0860 -0.4466 1.8678 6 6 3.1557 -1.3781 2.9996 7 6 4.2343 -1.4808 3.9969 8 8 4.1620 -2.3050 4.8883 9 7 5.3017 -0.6613 3.9219 10 6 6.3750 -0.7638 4.9137 11 6 7.4574 0.2720 4.6029 12 9 7.7960 0.3133 3.2460 13 6 7.1775 1.6567 5.2104 14 6 7.9303 1.1706 6.4624 15 1 7.2890 0.6793 7.1941 16 6 8.8365 2.2341 7.0857 17 8 8.0825 3.0194 8.0113 18 6 8.6745 0.1912 5.5393 19 6 2.0225 -2.1335 2.9368 20 6 1.6220 -3.2431 3.8793 21 6 0.1299 -3.5334 3.6731 22 6 -0.1482 -3.6790 2.1739 23 6 -0.0052 -2.3105 1.4963 24 7 1.2886 -1.7252 1.8770 25 1 -0.3934 0.4417 0.7650 26 1 1.7924 -0.5138 -0.8899 27 1 1.5614 2.4679 -1.2085 28 1 1.5878 2.4586 1.2242 29 1 3.8167 0.3022 1.5998 30 1 5.3597 -0.0041 3.2108 31 1 6.8077 -1.7636 4.8789 32 1 5.9696 -0.5778 5.9084 33 1 7.6789 2.4719 4.6886 34 1 6.1193 1.8515 5.3843 35 1 9.6606 1.7483 7.6082 36 1 9.2332 2.8786 6.3012 37 1 8.5948 3.7150 8.4458 38 1 8.8229 -0.7953 5.9784 39 1 9.5857 0.6050 5.1076 40 1 2.2042 -4.1385 3.6615 41 1 1.7976 -2.9320 4.9091 42 1 -0.1357 -4.4585 4.1847 43 1 -0.4607 -2.7110 4.0766 44 1 0.5629 -4.3815 1.7392 45 1 -1.1622 -4.0509 2.0272 46 1 -0.8120 -1.6492 1.8124 47 1 -0.0419 -2.4425 0.4149 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16500644_16915396.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:03:12 Heat of formation + Delta-G solvation = -103.208242 kcal Electronic energy + Delta-G solvation = -30295.987721 eV Core-core repulsion = 25974.682528 eV Total energy + Delta-G solvation = -4321.305192 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 339.168 amu Computer time = 0.98 seconds Orbital eigenvalues (eV) -48.64048 -42.74774 -40.48390 -39.66329 -38.11921 -37.26066 -36.89454 -35.23858 -33.47346 -31.20171 -30.43481 -29.19035 -27.28149 -27.04980 -26.35002 -24.66208 -23.61303 -22.80155 -21.73112 -20.98580 -20.36942 -19.60791 -18.93071 -18.32251 -17.61418 -17.31381 -17.01911 -16.82833 -16.76873 -16.45466 -16.02063 -15.71812 -15.68434 -15.52322 -15.38376 -15.19214 -15.07063 -14.92225 -14.74604 -14.47305 -14.22800 -14.08512 -13.86556 -13.75047 -13.33784 -13.23211 -12.82252 -12.73119 -12.41546 -12.36707 -12.16133 -12.13483 -12.06536 -11.89002 -11.78336 -11.54426 -11.35850 -10.93808 -10.93538 -10.68393 -9.99959 -9.52975 -8.97847 -5.00424 0.86816 1.01624 1.43087 1.60897 1.74079 1.98527 2.35895 2.72147 2.94281 3.09984 3.14714 3.24670 3.25682 3.42725 3.43602 3.52438 3.63860 3.76309 3.77809 3.86811 4.16492 4.20863 4.22441 4.27997 4.33438 4.38611 4.39227 4.44083 4.48425 4.54502 4.56660 4.57156 4.65275 4.67922 4.71519 4.75017 4.81770 4.85743 4.89909 5.00173 5.04577 5.15896 5.20450 5.27583 5.52292 5.77337 6.03833 6.23260 6.24528 6.61990 6.70891 7.49293 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.534 6.534 2 C -0.050 4.050 3 Si 0.710 3.290 4 C -0.012 4.012 5 C -0.161 4.161 6 C -0.235 4.235 7 C 0.597 3.403 8 O -0.549 6.549 9 N -0.726 5.726 10 C 0.123 3.877 11 C 0.080 3.920 12 F -0.195 7.195 13 C -0.146 4.146 14 C -0.109 4.109 15 H 0.106 0.894 16 C 0.087 3.913 17 O -0.573 6.573 18 C -0.142 4.142 19 C 0.122 3.878 20 C -0.056 4.056 21 C -0.129 4.129 22 C -0.139 4.139 23 C 0.108 3.892 24 N -0.428 5.428 25 H 0.376 0.624 26 H 0.121 0.879 27 H -0.254 1.254 28 H -0.257 1.257 29 H 0.153 0.847 30 H 0.405 0.595 31 H 0.082 0.918 32 H 0.089 0.911 33 H 0.098 0.902 34 H 0.085 0.915 35 H 0.051 0.949 36 H 0.049 0.951 37 H 0.382 0.618 38 H 0.089 0.911 39 H 0.102 0.898 40 H 0.089 0.911 41 H 0.100 0.900 42 H 0.080 0.920 43 H 0.068 0.932 44 H 0.076 0.924 45 H 0.088 0.912 46 H 0.083 0.917 47 H 0.096 0.904 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.598 1.789 -0.456 2.442 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.340 6.340 2 C -0.160 4.160 3 Si 0.609 3.391 4 C -0.121 4.121 5 C -0.185 4.185 6 C -0.244 4.244 7 C 0.386 3.614 8 O -0.428 6.428 9 N -0.378 5.378 10 C -0.001 4.001 11 C 0.062 3.938 12 F -0.175 7.175 13 C -0.183 4.183 14 C -0.127 4.127 15 H 0.125 0.875 16 C 0.009 3.991 17 O -0.379 6.379 18 C -0.180 4.180 19 C 0.004 3.996 20 C -0.094 4.094 21 C -0.167 4.167 22 C -0.177 4.177 23 C -0.013 4.013 24 N -0.104 5.104 25 H 0.224 0.776 26 H 0.139 0.861 27 H -0.179 1.179 28 H -0.181 1.181 29 H 0.170 0.830 30 H 0.240 0.760 31 H 0.100 0.900 32 H 0.107 0.893 33 H 0.116 0.884 34 H 0.104 0.896 35 H 0.069 0.931 36 H 0.068 0.932 37 H 0.229 0.771 38 H 0.107 0.893 39 H 0.120 0.880 40 H 0.107 0.893 41 H 0.118 0.882 42 H 0.098 0.902 43 H 0.087 0.913 44 H 0.094 0.906 45 H 0.107 0.893 46 H 0.102 0.898 47 H 0.114 0.886 Dipole moment (debyes) X Y Z Total from point charges 0.616 1.209 -0.742 1.546 hybrid contribution -0.432 0.497 0.095 0.665 sum 0.185 1.705 -0.647 1.834 Atomic orbital electron populations 1.86584 1.17893 1.79827 1.49659 1.24814 0.83581 1.11095 0.96492 0.94514 0.91402 0.72618 0.80615 1.20667 0.96148 0.95836 0.99405 1.21656 0.97774 1.02567 0.96512 1.19763 0.98073 1.04905 1.01654 1.17270 0.80647 0.79843 0.83592 1.90772 1.79094 1.36823 1.36070 1.45541 1.20741 1.39595 1.31950 1.21547 0.86397 0.98561 0.93601 1.22574 0.96568 0.97787 0.76909 1.92864 1.93118 1.97349 1.34180 1.23756 1.02877 0.95708 0.96008 1.22413 0.98099 0.96278 0.95908 0.87540 1.22112 0.93081 0.92234 0.91683 1.86486 1.41174 1.50249 1.59964 1.23598 0.97296 1.01225 0.95864 1.20377 0.91245 0.97634 0.90342 1.20525 0.95398 0.95038 0.98402 1.21732 0.96247 1.03056 0.95656 1.21990 1.03717 0.95732 0.96229 1.22163 0.82642 0.94897 1.01590 1.43858 1.17517 1.27171 1.21897 0.77621 0.86134 1.17882 1.18064 0.82955 0.76029 0.89984 0.89264 0.88370 0.89629 0.93125 0.93238 0.77079 0.89270 0.87974 0.89289 0.88158 0.90179 0.91338 0.90561 0.89345 0.89840 0.88618 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 0.11 10.68 -35.23 -0.38 -0.26 16 2 C -0.05 0.04 2.99 36.01 0.11 0.15 16 3 Si 0.71 -1.04 31.11 -169.99 -5.29 -6.32 16 4 C -0.01 -0.01 6.15 -81.87 -0.50 -0.51 16 5 C -0.16 -0.12 9.09 -37.47 -0.34 -0.46 16 6 C -0.23 -0.71 6.28 -103.48 -0.65 -1.36 16 7 C 0.60 2.35 7.81 -12.59 -0.10 2.26 16 8 O -0.55 -3.70 15.33 5.25 0.08 -3.62 16 9 N -0.73 -0.98 5.45 -61.43 -0.33 -1.32 16 10 C 0.12 0.06 5.26 -4.04 -0.02 0.04 16 11 C 0.08 -0.05 1.88 -89.81 -0.17 -0.22 16 12 F -0.19 -0.23 16.67 2.25 0.04 -0.19 16 13 C -0.15 0.16 7.08 -25.82 -0.18 -0.02 16 14 C -0.11 0.14 3.66 -89.71 -0.33 -0.19 16 15 H 0.11 -0.07 7.70 -51.93 -0.40 -0.47 16 16 C 0.09 -0.13 6.89 37.15 0.26 0.12 16 17 O -0.57 -0.04 13.66 -35.23 -0.48 -0.52 16 18 C -0.14 0.27 7.13 -25.92 -0.18 0.08 16 19 C 0.12 0.31 6.57 -81.64 -0.54 -0.22 16 20 C -0.06 -0.08 5.33 -27.53 -0.15 -0.23 16 21 C -0.13 0.10 5.97 -26.44 -0.16 -0.05 16 22 C -0.14 0.22 5.94 -26.45 -0.16 0.06 16 23 C 0.11 -0.09 5.33 -3.57 -0.02 -0.11 16 24 N -0.43 -0.49 3.11 -107.23 -0.33 -0.83 16 25 H 0.38 -0.89 8.63 45.56 0.39 -0.50 16 26 H 0.12 -0.17 7.96 -51.93 -0.41 -0.58 16 27 H -0.25 -0.38 7.11 56.52 0.40 0.02 16 28 H -0.26 -0.30 7.11 56.52 0.40 0.10 16 29 H 0.15 -0.34 6.52 -52.49 -0.34 -0.68 16 30 H 0.40 -0.13 7.20 -40.82 -0.29 -0.42 16 31 H 0.08 0.09 8.14 -51.93 -0.42 -0.33 16 32 H 0.09 0.05 7.38 -51.93 -0.38 -0.33 16 33 H 0.10 -0.14 7.90 -51.93 -0.41 -0.55 16 34 H 0.09 -0.06 8.10 -51.93 -0.42 -0.48 16 35 H 0.05 -0.12 8.14 -51.93 -0.42 -0.54 16 36 H 0.05 -0.12 7.85 -51.93 -0.41 -0.53 16 37 H 0.38 -1.54 9.12 45.56 0.42 -1.12 16 38 H 0.09 -0.22 8.10 -51.93 -0.42 -0.64 16 39 H 0.10 -0.24 8.10 -51.93 -0.42 -0.67 16 40 H 0.09 0.15 8.14 -51.93 -0.42 -0.27 16 41 H 0.10 0.27 7.39 -51.93 -0.38 -0.11 16 42 H 0.08 -0.13 8.14 -51.93 -0.42 -0.55 16 43 H 0.07 -0.04 8.12 -51.93 -0.42 -0.47 16 44 H 0.08 -0.07 8.11 -51.93 -0.42 -0.49 16 45 H 0.09 -0.26 8.14 -51.93 -0.42 -0.68 16 46 H 0.08 -0.15 7.94 -51.93 -0.41 -0.56 16 47 H 0.10 -0.07 7.69 -51.93 -0.40 -0.47 16 LS Contribution 378.10 15.07 5.70 5.70 Total: 0.00 -8.79 378.10 -10.58 -19.38 By element: Atomic # 1 Polarization: -4.89 SS G_CDS: -6.45 Total: -11.34 kcal Atomic # 6 Polarization: 2.46 SS G_CDS: -3.13 Total: -0.67 kcal Atomic # 7 Polarization: -1.48 SS G_CDS: -0.67 Total: -2.15 kcal Atomic # 8 Polarization: -3.62 SS G_CDS: -0.78 Total: -4.40 kcal Atomic # 9 Polarization: -0.23 SS G_CDS: 0.04 Total: -0.19 kcal Atomic # 14 Polarization: -1.04 SS G_CDS: -5.29 Total: -6.32 kcal Total LS contribution 5.70 Total: 5.70 kcal Total: -8.79 -10.58 -19.38 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16500644_16915396.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -83.831 kcal (2) G-P(sol) polarization free energy of solvation -8.794 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -92.625 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.583 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.377 kcal (6) G-S(sol) free energy of system = (1) + (5) -103.208 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.99 seconds