Wall clock time and date at job start Sun Mar 7 2021 09:03:18 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42902 * 1 3 3 Si 1.86292 * 109.46804 * 2 1 4 4 C 1.50696 * 109.47181 * 239.99718 * 2 1 3 5 5 C 1.38269 * 119.94750 * 300.00422 * 4 2 1 6 6 C 1.38139 * 120.05370 * 180.02562 * 5 4 2 7 7 C 1.38734 * 119.94711 * 359.97438 * 6 5 4 8 8 O 1.35903 * 120.05269 * 180.02562 * 7 6 5 9 9 C 1.42906 * 116.99522 * 180.02562 * 8 7 6 10 10 C 1.50706 * 109.46702 * 179.97438 * 9 8 7 11 11 O 1.21279 * 120.00072 * 359.97438 * 10 9 8 12 12 N 1.34777 * 119.99762 * 179.97438 * 10 9 8 13 13 C 1.46496 * 120.00258 * 179.97438 * 12 10 9 14 14 C 1.52993 * 109.47551 * 180.02562 * 13 12 10 15 15 F 1.39901 * 112.85163 * 316.20211 * 14 13 12 16 16 C 1.53788 * 113.61199 * 87.50597 * 14 13 12 17 17 C 1.53774 * 87.08235 * 89.11724 * 16 14 13 18 18 H 1.08997 * 113.61693 * 270.88333 * 17 16 14 19 19 C 1.53002 * 113.68996 * 139.98901 * 17 16 14 20 20 O 1.42904 * 109.46930 * 87.46774 * 19 17 16 21 21 C 1.53781 * 87.08339 * 25.43287 * 17 16 14 22 22 C 1.38725 * 119.88813 * 0.27668 * 7 6 5 23 23 C 1.38145 * 119.94387 * 359.46769 * 22 7 6 24 24 H 0.96702 * 113.99741 * 60.00546 * 1 2 3 25 25 H 1.09005 * 109.46731 * 119.99736 * 2 1 3 26 26 H 1.48499 * 110.00593 * 298.67770 * 3 2 1 27 27 H 1.48506 * 110.00394 * 60.00092 * 3 2 1 28 28 H 1.07997 * 119.96991 * 359.97026 * 5 4 2 29 29 H 1.08006 * 120.02293 * 179.97438 * 6 5 4 30 30 H 1.09000 * 109.46890 * 59.99975 * 9 8 7 31 31 H 1.09000 * 109.47141 * 299.99618 * 9 8 7 32 32 H 0.96999 * 120.00047 * 0.02562 * 12 10 9 33 33 H 1.09000 * 109.47024 * 300.00478 * 13 12 10 34 34 H 1.09004 * 109.46875 * 60.00324 * 13 12 10 35 35 H 1.09004 * 113.61282 * 203.66954 * 16 14 13 36 36 H 1.08997 * 113.61181 * 334.56089 * 16 14 13 37 37 H 1.09000 * 109.46995 * 207.46143 * 19 17 16 38 38 H 1.08998 * 109.47446 * 327.46416 * 19 17 16 39 39 H 0.96693 * 114.00087 * 180.02562 * 20 19 17 40 40 H 1.09001 * 113.61736 * 220.02268 * 21 17 16 41 41 H 1.09000 * 113.69132 * 89.12584 * 21 17 16 42 42 H 1.08000 * 120.02603 * 179.72597 * 22 7 6 43 43 H 1.08002 * 119.97017 * 180.23008 * 23 22 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7564 0.0000 4 6 1.9314 -0.7104 -1.2304 5 6 1.5966 -2.0342 -1.4481 6 6 2.0563 -2.6877 -2.5749 7 6 2.8540 -2.0147 -3.4889 8 8 3.3071 -2.6554 -4.5985 9 6 4.1241 -1.9003 -5.4954 10 6 4.5295 -2.7693 -6.6580 11 8 4.1559 -3.9219 -6.7128 12 7 5.3071 -2.2657 -7.6368 13 6 5.7017 -3.1106 -8.7667 14 6 6.5763 -2.3022 -9.7270 15 9 6.0809 -1.0148 -9.9601 16 6 8.0724 -2.3337 -9.3723 17 6 8.1743 -3.5903 -10.2528 18 1 7.9880 -4.5184 -9.7124 19 6 9.4445 -3.6431 -11.1041 20 8 10.4965 -4.2519 -10.3526 21 6 6.9456 -3.0622 -11.0120 22 6 3.1928 -0.6881 -3.2655 23 6 2.7262 -0.0374 -2.1398 24 1 -0.3933 0.4416 -0.7651 25 1 1.7923 -0.5138 0.8901 26 1 1.5879 2.4586 -1.2242 27 1 1.5614 2.4679 1.2085 28 1 0.9760 -2.5579 -0.7361 29 1 1.7948 -3.7219 -2.7443 30 1 5.0157 -1.5554 -4.9717 31 1 3.5628 -1.0409 -5.8621 32 1 5.6062 -1.3440 -7.5928 33 1 6.2637 -3.9693 -8.3994 34 1 4.8105 -3.4566 -9.2903 35 1 8.6312 -1.4820 -9.7605 36 1 8.2669 -2.5231 -8.3167 37 1 9.2548 -4.2287 -12.0037 38 1 9.7366 -2.6311 -11.3842 39 1 11.3341 -4.3184 -10.8311 40 1 6.2304 -3.8399 -11.2800 41 1 7.1949 -2.4098 -11.8488 42 1 3.8173 -0.1632 -3.9733 43 1 2.9866 0.9965 -1.9674 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16500644_2989410.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:03:18 Heat of formation + Delta-G solvation = -143.384368 kcal Electronic energy + Delta-G solvation = -26725.929783 eV Core-core repulsion = 22460.701379 eV Total energy + Delta-G solvation = -4265.228403 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 326.141 amu Computer time = 0.89 seconds Orbital eigenvalues (eV) -48.84125 -41.57186 -40.76494 -40.09256 -39.00337 -37.39063 -37.20058 -35.63299 -32.47944 -31.78972 -30.91125 -29.25824 -27.29464 -26.94210 -26.11705 -24.00273 -23.01190 -22.41447 -21.70800 -20.46306 -19.54610 -18.70242 -18.41796 -18.24950 -17.71213 -17.52677 -17.06385 -16.90463 -16.74786 -16.46067 -16.19599 -15.82232 -15.78720 -15.69617 -15.53968 -15.05132 -14.81965 -14.65107 -14.42066 -14.31513 -14.00984 -13.73679 -13.66970 -13.45625 -13.35237 -12.97141 -12.52121 -12.29442 -12.25695 -12.17050 -12.11318 -11.71133 -11.63197 -11.52268 -11.04269 -10.98771 -10.59032 -10.35796 -10.05015 -9.23554 -4.97748 0.27596 0.29087 1.28657 1.31991 1.40549 1.57992 1.95916 2.43169 2.64491 2.80446 2.95154 3.05603 3.06967 3.28256 3.37813 3.42521 3.66710 3.71306 3.72729 3.84340 3.85251 3.86759 4.07431 4.16575 4.22090 4.25596 4.34790 4.39021 4.43257 4.44382 4.48208 4.53147 4.54194 4.65117 4.70940 4.82296 4.94254 5.09148 5.13861 5.14548 5.23979 5.49115 5.66421 6.13238 6.30276 6.41529 6.54237 6.97660 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.530 6.530 2 C -0.070 4.070 3 Si 0.682 3.318 4 C -0.155 4.155 5 C -0.051 4.051 6 C -0.145 4.145 7 C 0.134 3.866 8 O -0.288 6.288 9 C 0.041 3.959 10 C 0.518 3.482 11 O -0.510 6.510 12 N -0.726 5.726 13 C 0.122 3.878 14 C 0.079 3.921 15 F -0.195 7.195 16 C -0.145 4.145 17 C -0.109 4.109 18 H 0.107 0.893 19 C 0.087 3.913 20 O -0.573 6.573 21 C -0.141 4.141 22 C -0.206 4.206 23 C -0.075 4.075 24 H 0.376 0.624 25 H 0.118 0.882 26 H -0.261 1.261 27 H -0.257 1.257 28 H 0.135 0.865 29 H 0.136 0.864 30 H 0.097 0.903 31 H 0.097 0.903 32 H 0.407 0.593 33 H 0.094 0.906 34 H 0.086 0.914 35 H 0.099 0.901 36 H 0.085 0.915 37 H 0.051 0.949 38 H 0.050 0.950 39 H 0.383 0.617 40 H 0.090 0.910 41 H 0.103 0.897 42 H 0.132 0.868 43 H 0.130 0.870 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.604 3.209 -3.404 7.300 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.337 6.337 2 C -0.180 4.180 3 Si 0.583 3.417 4 C -0.156 4.156 5 C -0.069 4.069 6 C -0.164 4.164 7 C 0.089 3.911 8 O -0.200 6.200 9 C -0.038 4.038 10 C 0.303 3.697 11 O -0.384 6.384 12 N -0.381 5.381 13 C -0.002 4.002 14 C 0.060 3.940 15 F -0.175 7.175 16 C -0.183 4.183 17 C -0.127 4.127 18 H 0.126 0.874 19 C 0.009 3.991 20 O -0.379 6.379 21 C -0.179 4.179 22 C -0.225 4.225 23 C -0.092 4.092 24 H 0.223 0.777 25 H 0.136 0.864 26 H -0.186 1.186 27 H -0.182 1.182 28 H 0.153 0.847 29 H 0.154 0.846 30 H 0.115 0.885 31 H 0.114 0.886 32 H 0.242 0.758 33 H 0.112 0.888 34 H 0.104 0.896 35 H 0.117 0.883 36 H 0.104 0.896 37 H 0.070 0.930 38 H 0.068 0.932 39 H 0.230 0.770 40 H 0.108 0.892 41 H 0.122 0.878 42 H 0.150 0.850 43 H 0.148 0.852 Dipole moment (debyes) X Y Z Total from point charges 4.675 2.677 -2.505 5.940 hybrid contribution -0.405 0.703 -1.166 1.420 sum 4.269 3.380 -3.670 6.567 Atomic orbital electron populations 1.86600 1.17825 1.79922 1.49332 1.24957 0.83866 1.10757 0.98416 0.95120 0.91700 0.74636 0.80217 1.20204 1.01879 0.95499 0.98013 1.20860 0.96783 0.93419 0.95844 1.20537 1.00402 1.01289 0.94151 1.19076 0.94291 0.91086 0.86672 1.86170 1.64248 1.38610 1.31012 1.22439 0.96549 0.94433 0.90334 1.20014 0.78603 0.88094 0.82995 1.90799 1.52977 1.17549 1.77051 1.45594 1.53204 1.16378 1.22906 1.21643 0.99248 0.93279 0.86003 1.22585 0.93986 0.79683 0.97746 1.92866 1.89465 1.39920 1.95274 1.23736 0.93266 0.99119 1.02185 1.22390 0.93807 0.99009 0.97515 0.87445 1.22105 0.86914 0.96747 0.93356 1.86480 1.23033 1.83490 1.44896 1.23609 0.97546 1.00376 0.96413 1.21174 1.06215 0.94201 1.00911 1.20786 0.96087 0.99215 0.93160 0.77667 0.86419 1.18586 1.18247 0.84734 0.84617 0.88470 0.88565 0.75796 0.88791 0.89566 0.88257 0.89621 0.93031 0.93211 0.76968 0.89174 0.87821 0.85024 0.85243 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.72 12.77 -35.23 -0.45 -1.17 16 2 C -0.07 0.01 2.82 36.00 0.10 0.12 16 3 Si 0.68 -0.71 29.78 -169.99 -5.06 -5.78 16 4 C -0.16 -0.04 5.39 -104.60 -0.56 -0.60 16 5 C -0.05 -0.05 9.60 -39.61 -0.38 -0.43 16 6 C -0.15 -0.25 9.99 -39.43 -0.39 -0.64 16 7 C 0.13 0.22 6.69 -39.22 -0.26 -0.04 16 8 O -0.29 -0.79 9.67 -39.34 -0.38 -1.17 16 9 C 0.04 -0.04 5.22 36.01 0.19 0.15 16 10 C 0.52 0.70 7.91 -10.98 -0.09 0.61 16 11 O -0.51 -3.14 16.50 -14.35 -0.24 -3.38 16 12 N -0.73 0.94 5.45 -60.30 -0.33 0.62 16 13 C 0.12 -0.14 5.27 -4.05 -0.02 -0.16 16 14 C 0.08 -0.15 1.91 -89.81 -0.17 -0.33 16 15 F -0.19 0.02 16.61 2.25 0.04 0.06 16 16 C -0.15 0.34 7.06 -25.92 -0.18 0.15 16 17 C -0.11 0.24 3.66 -89.81 -0.33 -0.09 16 18 H 0.11 -0.18 7.72 -51.93 -0.40 -0.58 16 19 C 0.09 -0.19 6.89 37.16 0.26 0.06 16 20 O -0.57 0.33 13.66 -35.23 -0.48 -0.15 16 21 C -0.14 0.40 7.12 -25.92 -0.18 0.22 16 22 C -0.21 0.08 9.04 -39.44 -0.36 -0.28 16 23 C -0.07 0.04 8.66 -39.60 -0.34 -0.30 16 24 H 0.38 -0.52 8.70 45.56 0.40 -0.12 16 25 H 0.12 -0.10 7.96 -51.93 -0.41 -0.52 16 26 H -0.26 -0.22 7.11 56.52 0.40 0.18 16 27 H -0.26 -0.62 7.11 56.52 0.40 -0.22 16 28 H 0.13 0.02 8.06 -52.49 -0.42 -0.41 16 29 H 0.14 0.17 8.06 -52.48 -0.42 -0.25 16 30 H 0.10 -0.36 7.65 -51.93 -0.40 -0.76 16 31 H 0.10 -0.32 7.67 -51.93 -0.40 -0.72 16 32 H 0.41 -1.46 8.03 -40.82 -0.33 -1.79 16 33 H 0.09 -0.09 7.39 -51.93 -0.38 -0.48 16 34 H 0.09 -0.04 8.14 -51.93 -0.42 -0.46 16 35 H 0.10 -0.24 7.90 -51.93 -0.41 -0.65 16 36 H 0.09 -0.18 8.10 -51.93 -0.42 -0.60 16 37 H 0.05 -0.16 8.14 -51.93 -0.42 -0.58 16 38 H 0.05 -0.15 7.85 -51.93 -0.41 -0.56 16 39 H 0.38 -1.76 9.12 45.56 0.42 -1.34 16 40 H 0.09 -0.31 8.10 -51.93 -0.42 -0.73 16 41 H 0.10 -0.34 8.10 -51.93 -0.42 -0.76 16 42 H 0.13 -0.41 6.30 -52.49 -0.33 -0.74 16 43 H 0.13 -0.33 4.87 -52.49 -0.26 -0.58 16 LS Contribution 363.73 15.07 5.48 5.48 Total: 0.00 -10.48 363.73 -9.21 -19.70 By element: Atomic # 1 Polarization: -7.60 SS G_CDS: -5.06 Total: -12.66 kcal Atomic # 6 Polarization: 1.18 SS G_CDS: -2.73 Total: -1.55 kcal Atomic # 7 Polarization: 0.94 SS G_CDS: -0.33 Total: 0.62 kcal Atomic # 8 Polarization: -4.32 SS G_CDS: -1.55 Total: -5.87 kcal Atomic # 9 Polarization: 0.02 SS G_CDS: 0.04 Total: 0.06 kcal Atomic # 14 Polarization: -0.71 SS G_CDS: -5.06 Total: -5.78 kcal Total LS contribution 5.48 Total: 5.48 kcal Total: -10.48 -9.21 -19.70 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16500644_2989410.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -123.687 kcal (2) G-P(sol) polarization free energy of solvation -10.483 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -134.169 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.215 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.698 kcal (6) G-S(sol) free energy of system = (1) + (5) -143.384 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.89 seconds