Wall clock time and date at job start Sun Mar 7 2021 09:03:21 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42904 * 1 3 3 Si 1.86306 * 109.46689 * 2 1 4 4 C 1.50697 * 109.47390 * 120.00147 * 2 1 3 5 5 C 1.38267 * 119.94354 * 65.00111 * 4 2 1 6 6 C 1.38145 * 120.05170 * 180.02562 * 5 4 2 7 7 C 1.38726 * 119.95000 * 359.97438 * 6 5 4 8 8 O 1.35901 * 120.05827 * 180.02562 * 7 6 5 9 9 C 1.42900 * 117.00024 * 179.97438 * 8 7 6 10 10 C 1.52997 * 109.47084 * 180.02562 * 9 8 7 11 11 C 1.50703 * 109.47084 * 180.02562 * 10 9 8 12 12 O 1.21278 * 119.99985 * 0.02562 * 11 10 9 13 13 N 1.34779 * 119.99944 * 180.02562 * 11 10 9 14 14 C 1.46499 * 119.99872 * 180.02562 * 13 11 10 15 15 C 1.53000 * 109.46840 * 180.02562 * 14 13 11 16 16 F 1.39892 * 112.85218 * 48.80278 * 15 14 13 17 17 C 1.53784 * 113.61263 * 180.02562 * 15 14 13 18 18 C 1.53780 * 87.08094 * 139.97882 * 17 15 14 19 19 H 1.09003 * 113.61204 * 220.01724 * 18 17 15 20 20 C 1.53000 * 113.61363 * 89.20116 * 18 17 15 21 21 O 1.42905 * 109.46902 * 174.99841 * 20 18 17 22 22 C 1.53780 * 87.08071 * 334.56286 * 18 17 15 23 23 C 1.38736 * 119.88377 * 0.27937 * 7 6 5 24 24 C 1.38147 * 119.94625 * 359.46687 * 23 7 6 25 25 H 0.96699 * 113.99887 * 299.99163 * 1 2 3 26 26 H 1.08998 * 109.47075 * 240.00616 * 2 1 3 27 27 H 1.48508 * 109.99633 * 178.68066 * 3 2 1 28 28 H 1.48496 * 110.00116 * 300.00221 * 3 2 1 29 29 H 1.08000 * 119.97243 * 359.97399 * 5 4 2 30 30 H 1.08005 * 120.02310 * 179.97438 * 6 5 4 31 31 H 1.09002 * 109.47002 * 60.00347 * 9 8 7 32 32 H 1.09001 * 109.47130 * 300.00448 * 9 8 7 33 33 H 1.09002 * 109.47045 * 60.00217 * 10 9 8 34 34 H 1.09001 * 109.47375 * 300.00142 * 10 9 8 35 35 H 0.97000 * 119.99708 * 359.97438 * 13 11 10 36 36 H 1.09002 * 109.47391 * 59.99686 * 14 13 11 37 37 H 1.09001 * 109.46813 * 299.99742 * 14 13 11 38 38 H 1.09005 * 113.61366 * 254.52860 * 17 15 14 39 39 H 1.08998 * 113.61663 * 25.42399 * 17 15 14 40 40 H 1.09000 * 109.46805 * 294.99235 * 20 18 17 41 41 H 1.08994 * 109.47007 * 54.99807 * 20 18 17 42 42 H 0.96696 * 113.99780 * 180.02562 * 21 20 18 43 43 H 1.08998 * 113.61464 * 270.88146 * 22 18 17 44 44 H 1.09000 * 113.61098 * 139.97948 * 22 18 17 45 45 H 1.08005 * 120.02404 * 179.72270 * 23 7 6 46 46 H 1.07994 * 119.96926 * 180.23481 * 24 23 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7566 0.0000 4 6 1.9314 -0.7104 1.2304 5 6 1.6842 -2.0605 1.3971 6 6 2.1432 -2.7139 2.5244 7 6 2.8532 -2.0145 3.4894 8 8 3.3063 -2.6551 4.5990 9 6 4.0304 -1.8720 5.5500 10 6 4.4566 -2.7587 6.7218 11 6 5.2197 -1.9327 7.7251 12 8 5.4039 -0.7511 7.5231 13 7 5.6973 -2.5071 8.8469 14 6 6.4386 -1.7040 9.8225 15 6 6.8660 -2.5910 10.9936 16 9 7.4749 -3.7807 10.5801 17 6 7.6547 -1.8399 12.0794 18 6 6.8653 -2.6629 13.1111 19 1 6.5603 -2.0891 13.9862 20 6 7.5315 -3.9915 13.4744 21 8 6.7899 -4.6265 14.5180 22 6 5.7637 -2.7948 12.0463 23 6 3.0954 -0.6587 3.3222 24 6 2.6388 -0.0110 2.1906 25 1 -0.3933 0.4416 0.7651 26 1 1.7924 -0.5137 -0.8900 27 1 3.5346 1.7704 0.0321 28 1 1.5613 2.4680 -1.2084 29 1 1.1310 -2.6045 0.6458 30 1 1.9494 -3.7684 2.6544 31 1 3.3945 -1.0660 5.9164 32 1 4.9151 -1.4491 5.0742 33 1 5.0926 -3.5644 6.3551 34 1 3.5721 -3.1819 7.1978 35 1 5.5496 -3.4520 9.0086 36 1 5.8018 -0.8990 10.1894 37 1 7.3228 -1.2797 9.3469 38 1 8.7228 -2.0573 12.0723 39 1 7.4393 -0.7720 12.1156 40 1 7.5525 -4.6391 12.5978 41 1 8.5505 -3.8061 13.8138 42 1 7.1561 -5.4759 14.7998 43 1 5.0313 -1.9880 12.0736 44 1 5.3052 -3.7831 12.0125 45 1 3.6441 -0.1110 4.0742 46 1 2.8305 1.0436 2.0583 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16500644_4549602.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:03:21 Heat of formation + Delta-G solvation = -153.818741 kcal Electronic energy + Delta-G solvation = -28369.134305 eV Core-core repulsion = 23947.915814 eV Total energy + Delta-G solvation = -4421.218490 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 340.156 amu Computer time = 1.18 seconds Orbital eigenvalues (eV) -48.94109 -41.40656 -40.82047 -39.82643 -39.15006 -37.24914 -37.15491 -35.67184 -33.45896 -32.08252 -31.51418 -30.17362 -27.32835 -27.01815 -26.34827 -25.28515 -23.53556 -22.79129 -22.20788 -21.51327 -20.13760 -19.54992 -18.59389 -18.34498 -17.96069 -17.56564 -17.51774 -17.02975 -16.90213 -16.67197 -16.43447 -16.15091 -15.91429 -15.87553 -15.56893 -15.38718 -15.17937 -14.69636 -14.59023 -14.54304 -14.40757 -14.28247 -13.95228 -13.65281 -13.55616 -13.47832 -13.18706 -12.87814 -12.83506 -12.45947 -12.21308 -12.04639 -11.81072 -11.78952 -11.71882 -11.60429 -11.31120 -11.10278 -10.80089 -10.41642 -10.26829 -10.05105 -9.22542 -5.01387 0.27469 0.29727 1.31932 1.46773 1.62327 1.64572 1.94926 2.40681 2.65135 2.99879 3.11446 3.19272 3.26300 3.48350 3.53318 3.56612 3.71733 3.83085 3.87370 3.88718 3.91075 4.01135 4.20686 4.25383 4.33263 4.36987 4.41750 4.43341 4.49689 4.55575 4.57705 4.65011 4.65744 4.67430 4.69527 4.76694 4.86388 4.92664 4.96912 5.05834 5.17052 5.21637 5.27769 5.30838 5.48827 5.71194 6.29533 6.35142 6.78330 6.81933 7.04974 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.556 6.556 2 C -0.066 4.066 3 Si 0.769 3.231 4 C -0.163 4.163 5 C -0.060 4.060 6 C -0.159 4.159 7 C 0.123 3.877 8 O -0.322 6.322 9 C 0.073 3.927 10 C -0.134 4.134 11 C 0.523 3.477 12 O -0.578 6.578 13 N -0.718 5.718 14 C 0.113 3.887 15 C 0.080 3.920 16 F -0.195 7.195 17 C -0.135 4.135 18 C -0.119 4.119 19 H 0.092 0.908 20 C 0.082 3.918 21 O -0.594 6.594 22 C -0.142 4.142 23 C -0.209 4.209 24 C -0.078 4.078 25 H 0.395 0.605 26 H 0.106 0.894 27 H -0.289 1.289 28 H -0.298 1.298 29 H 0.139 0.861 30 H 0.141 0.859 31 H 0.071 0.929 32 H 0.065 0.935 33 H 0.123 0.877 34 H 0.128 0.872 35 H 0.416 0.584 36 H 0.097 0.903 37 H 0.073 0.927 38 H 0.089 0.911 39 H 0.126 0.874 40 H 0.055 0.945 41 H 0.056 0.944 42 H 0.397 0.603 43 H 0.116 0.884 44 H 0.079 0.921 45 H 0.142 0.858 46 H 0.147 0.853 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.616 -1.050 5.338 5.475 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.364 6.364 2 C -0.177 4.177 3 Si 0.676 3.324 4 C -0.163 4.163 5 C -0.078 4.078 6 C -0.178 4.178 7 C 0.077 3.923 8 O -0.236 6.236 9 C -0.003 4.003 10 C -0.173 4.173 11 C 0.310 3.690 12 O -0.458 6.458 13 N -0.370 5.370 14 C -0.011 4.011 15 C 0.061 3.939 16 F -0.175 7.175 17 C -0.173 4.173 18 C -0.138 4.138 19 H 0.111 0.889 20 C 0.005 3.995 21 O -0.402 6.402 22 C -0.179 4.179 23 C -0.227 4.227 24 C -0.095 4.095 25 H 0.245 0.755 26 H 0.124 0.876 27 H -0.217 1.217 28 H -0.226 1.226 29 H 0.156 0.844 30 H 0.159 0.841 31 H 0.089 0.911 32 H 0.083 0.917 33 H 0.141 0.859 34 H 0.146 0.854 35 H 0.253 0.747 36 H 0.115 0.885 37 H 0.091 0.909 38 H 0.107 0.893 39 H 0.144 0.856 40 H 0.073 0.927 41 H 0.074 0.926 42 H 0.247 0.753 43 H 0.134 0.866 44 H 0.098 0.902 45 H 0.160 0.840 46 H 0.164 0.836 Dipole moment (debyes) X Y Z Total from point charges 0.959 0.354 4.240 4.361 hybrid contribution 0.753 -1.534 -0.094 1.711 sum 1.712 -1.180 4.145 4.638 Atomic orbital electron populations 1.86461 1.17296 1.82173 1.50474 1.25052 0.85193 1.10389 0.97017 0.93810 0.77814 0.75868 0.84912 1.20331 1.02724 0.95261 0.98000 1.20978 0.96681 0.93788 0.96399 1.20664 1.01865 1.01344 0.93917 1.19183 0.94575 0.91411 0.87090 1.85959 1.69232 1.38910 1.29489 1.22460 0.95889 0.93638 0.88265 1.21433 1.03025 0.99162 0.93698 1.20587 0.78620 0.87536 0.82241 1.90742 1.59807 1.17812 1.77472 1.45758 1.56233 1.14357 1.20678 1.21836 0.97233 0.93877 0.88185 1.22243 0.95986 0.82319 0.93332 1.92827 1.84582 1.48540 1.91565 1.23597 1.00568 1.01350 0.91765 1.22313 0.96999 0.96068 0.98372 0.88927 1.22127 0.94109 0.93172 0.90093 1.86406 1.56844 1.40543 1.56449 1.23663 0.96500 1.04694 0.93051 1.21437 1.06410 0.93841 1.01057 1.20994 0.95965 0.99902 0.92656 0.75537 0.87623 1.21654 1.22613 0.84357 0.84139 0.91086 0.91672 0.85861 0.85390 0.74715 0.88526 0.90872 0.89274 0.85551 0.92694 0.92561 0.75291 0.86606 0.90246 0.84025 0.83632 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -0.68 12.83 -148.98 -1.91 -2.59 16 2 C -0.07 -0.05 2.80 71.24 0.20 0.15 16 3 Si 0.77 -0.57 29.80 68.60 2.04 1.48 16 4 C -0.16 -0.28 5.35 -19.85 -0.11 -0.39 16 5 C -0.06 -0.15 9.68 22.25 0.22 0.06 16 6 C -0.16 -0.51 9.99 22.36 0.22 -0.29 16 7 C 0.12 0.50 6.69 22.51 0.15 0.65 16 8 O -0.32 -1.00 10.14 -92.44 -0.94 -1.94 16 9 C 0.07 0.01 4.03 71.98 0.29 0.30 16 10 C -0.13 0.59 6.07 29.85 0.18 0.77 16 11 C 0.52 0.01 7.83 87.66 0.69 0.70 16 12 O -0.58 -4.70 15.98 -3.02 -0.05 -4.74 16 13 N -0.72 2.73 5.47 -463.05 -2.53 0.20 16 14 C 0.11 -0.41 5.36 86.38 0.46 0.05 16 15 C 0.08 -0.37 1.66 -10.27 -0.02 -0.39 16 16 F -0.19 0.15 15.02 44.97 0.68 0.83 16 17 C -0.13 0.84 7.13 31.12 0.22 1.07 16 18 C -0.12 0.41 4.19 -10.27 -0.04 0.37 16 19 H 0.09 -0.23 8.14 -2.39 -0.02 -0.25 16 20 C 0.08 -0.16 6.66 71.98 0.48 0.32 16 21 O -0.59 -0.28 13.66 -148.98 -2.04 -2.31 16 22 C -0.14 0.70 7.07 31.12 0.22 0.92 16 23 C -0.21 -0.50 9.04 22.37 0.20 -0.30 16 24 C -0.08 -0.07 8.66 22.25 0.19 0.13 16 25 H 0.39 -2.65 8.70 -74.06 -0.64 -3.29 16 26 H 0.11 0.18 7.96 -2.39 -0.02 0.17 16 27 H -0.29 -1.29 7.11 99.48 0.71 -0.58 16 28 H -0.30 -1.95 7.11 99.48 0.71 -1.24 16 29 H 0.14 0.10 8.06 -2.91 -0.02 0.07 16 30 H 0.14 0.12 8.06 -2.91 -0.02 0.09 16 31 H 0.07 0.05 7.61 -2.39 -0.02 0.03 16 32 H 0.06 0.10 7.63 -2.39 -0.02 0.09 16 33 H 0.12 -0.89 8.14 -2.39 -0.02 -0.91 16 34 H 0.13 -1.04 8.14 -2.39 -0.02 -1.06 16 35 H 0.42 -3.14 8.19 -92.71 -0.76 -3.90 16 36 H 0.10 -0.43 7.95 -2.39 -0.02 -0.45 16 37 H 0.07 -0.11 8.14 -2.39 -0.02 -0.13 16 38 H 0.09 -0.54 8.10 -2.38 -0.02 -0.56 16 39 H 0.13 -1.19 8.10 -2.39 -0.02 -1.21 16 40 H 0.05 -0.09 6.32 -2.39 -0.02 -0.11 16 41 H 0.06 -0.20 8.14 -2.39 -0.02 -0.22 16 42 H 0.40 -2.99 9.12 -74.06 -0.68 -3.66 16 43 H 0.12 -0.84 7.96 -2.39 -0.02 -0.86 16 44 H 0.08 -0.26 8.10 -2.39 -0.02 -0.28 16 45 H 0.14 0.04 6.30 -2.91 -0.02 0.02 16 46 H 0.15 -0.51 4.90 -2.91 -0.01 -0.53 16 Total: 0.00 -21.53 383.08 -2.19 -23.72 By element: Atomic # 1 Polarization: -17.76 SS G_CDS: -1.01 Total: -18.77 kcal Atomic # 6 Polarization: 0.57 SS G_CDS: 3.56 Total: 4.13 kcal Atomic # 7 Polarization: 2.73 SS G_CDS: -2.53 Total: 0.20 kcal Atomic # 8 Polarization: -6.65 SS G_CDS: -4.93 Total: -11.59 kcal Atomic # 9 Polarization: 0.15 SS G_CDS: 0.68 Total: 0.83 kcal Atomic # 14 Polarization: -0.57 SS G_CDS: 2.04 Total: 1.48 kcal Total: -21.53 -2.19 -23.72 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16500644_4549602.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -130.095 kcal (2) G-P(sol) polarization free energy of solvation -21.531 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -151.627 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.192 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.723 kcal (6) G-S(sol) free energy of system = (1) + (5) -153.819 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.18 seconds