Wall clock time and date at job start Sun Mar 7 2021 09:03:24 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86295 * 109.47044 * 2 1 4 4 C 1.50706 * 109.46705 * 240.00017 * 2 1 3 5 5 C 1.38247 * 119.96801 * 120.02364 * 4 2 1 6 6 C 1.38285 * 120.10611 * 179.97438 * 5 4 2 7 7 C 1.38120 * 120.05963 * 359.68012 * 6 5 4 8 8 C 1.38758 * 119.94371 * 0.59582 * 7 6 5 9 9 O 1.35894 * 120.05832 * 179.70082 * 8 7 6 10 10 C 1.42895 * 117.00251 * 359.72659 * 9 8 7 11 11 C 1.53001 * 109.47489 * 180.02562 * 10 9 8 12 12 C 1.50694 * 109.47168 * 179.97438 * 11 10 9 13 13 O 1.21283 * 120.00363 * 359.97438 * 12 11 10 14 14 N 1.34784 * 119.99988 * 179.97438 * 12 11 10 15 15 C 1.46493 * 119.99864 * 179.72721 * 14 12 11 16 16 C 1.53001 * 109.47084 * 180.02562 * 15 14 12 17 17 F 1.39901 * 112.85181 * 48.79758 * 16 15 14 18 18 C 1.53777 * 113.61582 * 179.97438 * 16 15 14 19 19 C 1.53780 * 87.08330 * 139.97755 * 18 16 15 20 20 H 1.09004 * 113.62174 * 220.01948 * 19 18 16 21 21 C 1.53002 * 113.61562 * 89.19932 * 19 18 16 22 22 O 1.42898 * 109.47241 * 175.00228 * 21 19 18 23 23 C 1.53784 * 87.08271 * 334.56769 * 19 18 16 24 24 C 1.38166 * 119.97235 * 299.99341 * 4 2 1 25 25 H 0.96703 * 114.00255 * 60.00061 * 1 2 3 26 26 H 1.09000 * 109.47179 * 120.00299 * 2 1 3 27 27 H 1.48496 * 110.00525 * 59.99849 * 3 2 1 28 28 H 1.48503 * 110.00264 * 181.32292 * 3 2 1 29 29 H 1.07993 * 119.94792 * 359.97438 * 5 4 2 30 30 H 1.08000 * 119.97261 * 179.97438 * 6 5 4 31 31 H 1.08003 * 120.03263 * 180.31999 * 7 6 5 32 32 H 1.09000 * 109.46932 * 59.99742 * 10 9 8 33 33 H 1.09002 * 109.46707 * 299.99847 * 10 9 8 34 34 H 1.08998 * 109.46837 * 59.99792 * 11 10 9 35 35 H 1.09002 * 109.46926 * 299.99596 * 11 10 9 36 36 H 0.97000 * 119.99339 * 0.02562 * 14 12 11 37 37 H 1.09007 * 109.47196 * 299.99538 * 15 14 12 38 38 H 1.09006 * 109.47678 * 59.99732 * 15 14 12 39 39 H 1.08996 * 113.61589 * 254.52300 * 18 16 15 40 40 H 1.09004 * 113.61479 * 25.42967 * 18 16 15 41 41 H 1.09004 * 109.47041 * 295.00422 * 21 19 18 42 42 H 1.08999 * 109.46963 * 54.99783 * 21 19 18 43 43 H 0.96700 * 113.99811 * 179.97438 * 22 21 19 44 44 H 1.08996 * 113.61267 * 270.88634 * 23 19 18 45 45 H 1.08990 * 113.61876 * 139.97926 * 23 19 18 46 46 H 1.08003 * 120.02424 * 0.05401 * 24 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7104 -1.2305 5 6 2.7264 -0.0381 -2.1399 6 6 3.1892 -0.6874 -3.2697 7 6 2.8635 -2.0116 -3.4890 8 6 2.0609 -2.6870 -2.5807 9 8 1.7339 -3.9881 -2.7972 10 6 2.2465 -4.5970 -3.9840 11 6 1.7758 -6.0511 -4.0554 12 6 2.3159 -6.6930 -5.3073 13 8 3.0087 -6.0506 -6.0678 14 7 2.0291 -7.9810 -5.5818 15 6 2.5492 -8.6032 -6.8018 16 6 2.0796 -10.0577 -6.8726 17 9 0.7066 -10.1971 -6.6429 18 6 2.5735 -10.8043 -8.1229 19 6 2.7981 -12.0219 -7.2108 20 1 3.7127 -12.5715 -7.4334 21 6 1.5734 -12.9310 -7.0893 22 8 1.9129 -14.0874 -6.3216 23 6 2.9456 -11.0254 -6.0488 24 6 1.5972 -2.0333 -1.4485 25 1 -0.3934 0.4417 -0.7651 26 1 1.7923 -0.5139 0.8899 27 1 1.5615 2.4679 1.2084 28 1 3.5346 1.7703 -0.0322 29 1 2.9865 0.9958 -1.9677 30 1 3.8099 -0.1600 -3.9789 31 1 3.2295 -2.5198 -4.3689 32 1 3.3360 -4.5679 -3.9658 33 1 1.8830 -4.0546 -4.8567 34 1 0.6864 -6.0797 -4.0738 35 1 2.1390 -6.5938 -3.1827 36 1 1.4747 -8.4946 -4.9737 37 1 2.1808 -8.0601 -7.6722 38 1 3.6388 -8.5730 -6.7891 39 1 1.7987 -10.9585 -8.8739 40 1 3.4938 -10.3958 -8.5404 41 1 0.7671 -12.3899 -6.5941 42 1 1.2484 -13.2374 -8.0835 43 1 1.1820 -14.7094 -6.2034 44 1 3.9676 -10.6773 -5.8993 45 1 2.4713 -11.3579 -5.1256 46 1 0.9756 -2.5579 -0.7379 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16500644_4549614.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:03:24 Heat of formation + Delta-G solvation = -153.467246 kcal Electronic energy + Delta-G solvation = -28414.032527 eV Core-core repulsion = 23992.829279 eV Total energy + Delta-G solvation = -4421.203248 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 340.156 amu Computer time = 1.18 seconds Orbital eigenvalues (eV) -48.94990 -41.42461 -40.84170 -39.83805 -39.12849 -37.29646 -37.21508 -35.69112 -33.43502 -32.46558 -31.06548 -30.08449 -27.34723 -27.05790 -26.80062 -25.03427 -23.68161 -22.87155 -22.10490 -21.49076 -20.14407 -19.40294 -18.63319 -18.22292 -17.75463 -17.61810 -17.54481 -17.16525 -17.00686 -16.77404 -16.65211 -16.20834 -16.09355 -15.87972 -15.41012 -15.39168 -15.20891 -14.88347 -14.58276 -14.55585 -14.39159 -14.20305 -13.96011 -13.64646 -13.49223 -13.24394 -13.18665 -12.93298 -12.84891 -12.47682 -12.38714 -11.99946 -11.83859 -11.82008 -11.63810 -11.61721 -11.32364 -11.12604 -10.81060 -10.50752 -10.28812 -9.93630 -9.28725 -4.98069 0.18645 0.37762 1.29967 1.44136 1.62659 1.65980 1.96749 2.39521 2.65653 2.98842 3.10283 3.17939 3.24981 3.47133 3.49414 3.53754 3.65469 3.83194 3.85384 3.89061 3.94134 4.08378 4.19610 4.22362 4.26406 4.35943 4.36742 4.41192 4.49335 4.54454 4.55914 4.60865 4.63678 4.65099 4.68505 4.73135 4.85202 4.91487 4.96760 5.04617 5.19964 5.24666 5.29370 5.36742 5.42722 5.69130 6.28250 6.33958 6.75527 6.81207 7.02499 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.555 6.555 2 C -0.079 4.079 3 Si 0.786 3.214 4 C -0.084 4.084 5 C -0.157 4.157 6 C -0.075 4.075 7 C -0.211 4.211 8 C 0.116 3.884 9 O -0.325 6.325 10 C 0.075 3.925 11 C -0.134 4.134 12 C 0.523 3.477 13 O -0.578 6.578 14 N -0.718 5.718 15 C 0.113 3.887 16 C 0.080 3.920 17 F -0.194 7.194 18 C -0.134 4.134 19 C -0.119 4.119 20 H 0.092 0.908 21 C 0.082 3.918 22 O -0.594 6.594 23 C -0.142 4.142 24 C -0.142 4.142 25 H 0.396 0.604 26 H 0.106 0.894 27 H -0.299 1.299 28 H -0.284 1.284 29 H 0.149 0.851 30 H 0.154 0.846 31 H 0.138 0.862 32 H 0.067 0.933 33 H 0.067 0.933 34 H 0.124 0.876 35 H 0.126 0.874 36 H 0.416 0.584 37 H 0.074 0.926 38 H 0.096 0.904 39 H 0.090 0.910 40 H 0.126 0.874 41 H 0.055 0.945 42 H 0.057 0.943 43 H 0.397 0.603 44 H 0.115 0.885 45 H 0.078 0.922 46 H 0.126 0.874 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.766 -1.359 -3.343 3.689 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.363 6.363 2 C -0.188 4.188 3 Si 0.692 3.308 4 C -0.085 4.085 5 C -0.175 4.175 6 C -0.092 4.092 7 C -0.230 4.230 8 C 0.071 3.929 9 O -0.239 6.239 10 C -0.001 4.001 11 C -0.174 4.174 12 C 0.311 3.689 13 O -0.458 6.458 14 N -0.370 5.370 15 C -0.011 4.011 16 C 0.061 3.939 17 F -0.175 7.175 18 C -0.172 4.172 19 C -0.137 4.137 20 H 0.111 0.889 21 C 0.005 3.995 22 O -0.403 6.403 23 C -0.180 4.180 24 C -0.161 4.161 25 H 0.246 0.754 26 H 0.124 0.876 27 H -0.227 1.227 28 H -0.211 1.211 29 H 0.166 0.834 30 H 0.171 0.829 31 H 0.155 0.845 32 H 0.085 0.915 33 H 0.085 0.915 34 H 0.142 0.858 35 H 0.144 0.856 36 H 0.253 0.747 37 H 0.092 0.908 38 H 0.114 0.886 39 H 0.108 0.892 40 H 0.144 0.856 41 H 0.073 0.927 42 H 0.075 0.925 43 H 0.247 0.753 44 H 0.133 0.867 45 H 0.097 0.903 46 H 0.144 0.856 Dipole moment (debyes) X Y Z Total from point charges 0.696 -0.502 -2.797 2.925 hybrid contribution -0.795 -1.395 0.290 1.632 sum -0.099 -1.897 -2.507 3.145 Atomic orbital electron populations 1.86467 1.17164 1.82242 1.50466 1.25312 0.85374 1.11326 0.96781 0.93520 0.77797 0.74816 0.84667 1.20248 0.97661 0.93597 0.96974 1.21179 1.00359 1.00742 0.95197 1.21256 0.97543 0.93398 0.97037 1.21558 1.03039 0.97113 1.01252 1.19150 0.95269 0.83479 0.94980 1.85951 1.71417 1.22837 1.43735 1.22435 0.98983 0.93011 0.85632 1.21432 1.04867 0.94186 0.96869 1.20559 0.79516 0.81716 0.87127 1.90741 1.40043 1.63536 1.51522 1.45756 1.53863 1.12032 1.25341 1.21843 1.00604 0.90657 0.88032 1.22243 0.76733 0.94376 1.00519 1.92830 1.32509 1.96629 1.95514 1.23592 1.04178 0.93942 0.95508 1.22315 0.99475 0.94956 0.96987 0.88933 1.22128 0.95913 0.86292 0.95164 1.86406 1.43230 1.34886 1.75740 1.23664 1.01363 0.94823 0.98127 1.20312 1.03839 0.94701 0.97224 0.75435 0.87613 1.22672 1.21077 0.83430 0.82851 0.84473 0.91509 0.91455 0.85759 0.85614 0.74717 0.90769 0.88587 0.89187 0.85555 0.92698 0.92500 0.75282 0.86682 0.90289 0.85588 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -0.97 12.77 -148.98 -1.90 -2.87 16 2 C -0.08 -0.08 2.82 71.24 0.20 0.12 16 3 Si 0.79 -1.41 29.79 68.60 2.04 0.63 16 4 C -0.08 -0.20 5.39 -19.88 -0.11 -0.31 16 5 C -0.16 0.02 8.67 22.28 0.19 0.21 16 6 C -0.07 -0.01 10.04 22.25 0.22 0.21 16 7 C -0.21 -0.65 9.04 22.37 0.20 -0.45 16 8 C 0.12 0.66 6.69 22.51 0.15 0.81 16 9 O -0.33 -1.64 10.14 -92.36 -0.94 -2.58 16 10 C 0.07 0.12 4.03 71.98 0.29 0.41 16 11 C -0.13 0.42 6.07 29.85 0.18 0.61 16 12 C 0.52 0.48 7.83 87.65 0.69 1.16 16 13 O -0.58 -5.17 15.98 -3.04 -0.05 -5.22 16 14 N -0.72 2.21 5.47 -463.05 -2.53 -0.32 16 15 C 0.11 -0.35 5.36 86.38 0.46 0.11 16 16 C 0.08 -0.34 1.66 -10.27 -0.02 -0.35 16 17 F -0.19 0.08 15.02 44.97 0.68 0.76 16 18 C -0.13 0.80 7.13 31.12 0.22 1.02 16 19 C -0.12 0.37 4.19 -10.27 -0.04 0.33 16 20 H 0.09 -0.20 8.14 -2.38 -0.02 -0.22 16 21 C 0.08 -0.14 6.66 71.98 0.48 0.34 16 22 O -0.59 -0.48 13.66 -148.98 -2.04 -2.51 16 23 C -0.14 0.63 7.07 31.12 0.22 0.85 16 24 C -0.14 -0.78 9.55 22.37 0.21 -0.56 16 25 H 0.40 -2.54 8.70 -74.06 -0.64 -3.19 16 26 H 0.11 0.25 7.96 -2.39 -0.02 0.23 16 27 H -0.30 -1.65 7.11 99.48 0.71 -0.94 16 28 H -0.28 -0.73 7.11 99.48 0.71 -0.02 16 29 H 0.15 -0.70 4.87 -2.91 -0.01 -0.72 16 30 H 0.15 -0.75 8.06 -2.91 -0.02 -0.77 16 31 H 0.14 0.20 6.30 -2.91 -0.02 0.18 16 32 H 0.07 0.17 7.61 -2.39 -0.02 0.15 16 33 H 0.07 0.17 7.63 -2.39 -0.02 0.15 16 34 H 0.12 -0.76 8.14 -2.39 -0.02 -0.78 16 35 H 0.13 -0.82 8.14 -2.39 -0.02 -0.84 16 36 H 0.42 -2.83 8.18 -92.71 -0.76 -3.59 16 37 H 0.07 -0.08 8.14 -2.38 -0.02 -0.10 16 38 H 0.10 -0.36 7.94 -2.38 -0.02 -0.38 16 39 H 0.09 -0.53 8.10 -2.39 -0.02 -0.55 16 40 H 0.13 -1.15 8.10 -2.39 -0.02 -1.17 16 41 H 0.05 -0.07 6.32 -2.38 -0.02 -0.09 16 42 H 0.06 -0.19 8.14 -2.39 -0.02 -0.21 16 43 H 0.40 -2.87 9.12 -74.06 -0.68 -3.54 16 44 H 0.11 -0.76 7.96 -2.39 -0.02 -0.78 16 45 H 0.08 -0.21 8.10 -2.39 -0.02 -0.23 16 46 H 0.13 0.77 8.06 -2.91 -0.02 0.75 16 Total: 0.00 -22.10 382.95 -2.18 -24.29 By element: Atomic # 1 Polarization: -15.67 SS G_CDS: -1.01 Total: -16.68 kcal Atomic # 6 Polarization: 0.94 SS G_CDS: 3.56 Total: 4.50 kcal Atomic # 7 Polarization: 2.21 SS G_CDS: -2.53 Total: -0.32 kcal Atomic # 8 Polarization: -8.26 SS G_CDS: -4.92 Total: -13.18 kcal Atomic # 9 Polarization: 0.08 SS G_CDS: 0.68 Total: 0.76 kcal Atomic # 14 Polarization: -1.41 SS G_CDS: 2.04 Total: 0.63 kcal Total: -22.10 -2.18 -24.29 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16500644_4549614.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -129.181 kcal (2) G-P(sol) polarization free energy of solvation -22.103 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -151.284 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.183 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.286 kcal (6) G-S(sol) free energy of system = (1) + (5) -153.467 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.18 seconds