Wall clock time and date at job start Sun Mar 7 2021 09:03:29 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86302 * 109.46914 * 2 1 4 4 C 1.50694 * 109.47589 * 239.99785 * 2 1 3 5 5 C 1.38242 * 119.97420 * 120.01726 * 4 2 1 6 6 C 1.38289 * 120.11288 * 179.97438 * 5 4 2 7 7 C 1.38125 * 120.05590 * 359.68352 * 6 5 4 8 8 C 1.38753 * 119.94059 * 0.59507 * 7 6 5 9 9 O 1.35901 * 120.05749 * 179.69680 * 8 7 6 10 10 C 1.42903 * 116.99844 * 359.73376 * 9 8 7 11 11 C 1.52998 * 109.47367 * 179.97438 * 10 9 8 12 12 C 1.52997 * 109.47270 * 179.97438 * 11 10 9 13 13 C 1.50700 * 109.47353 * 179.97438 * 12 11 10 14 14 O 1.21281 * 119.99689 * 0.02562 * 13 12 11 15 15 N 1.34776 * 120.00185 * 179.97438 * 13 12 11 16 16 C 1.46502 * 119.99854 * 180.02562 * 15 13 12 17 17 C 1.53006 * 109.46879 * 180.02562 * 16 15 13 18 18 F 1.39889 * 112.84950 * 316.19896 * 17 16 15 19 19 C 1.53784 * 113.61174 * 87.50174 * 17 16 15 20 20 C 1.53787 * 87.07648 * 139.98077 * 19 17 16 21 21 H 1.09003 * 113.68991 * 220.00775 * 20 19 17 22 22 C 1.52997 * 113.61418 * 89.11807 * 20 19 17 23 23 O 1.42898 * 109.47319 * 87.50225 * 22 20 19 24 24 C 1.53780 * 87.08169 * 334.56416 * 20 19 17 25 25 C 1.38169 * 119.97035 * 300.00376 * 4 2 1 26 26 H 0.96708 * 114.00024 * 60.00601 * 1 2 3 27 27 H 1.09003 * 109.46472 * 119.99689 * 2 1 3 28 28 H 1.48497 * 109.99992 * 59.99506 * 3 2 1 29 29 H 1.48494 * 109.99846 * 181.31649 * 3 2 1 30 30 H 1.07997 * 119.94067 * 359.97438 * 5 4 2 31 31 H 1.07994 * 119.97193 * 179.97438 * 6 5 4 32 32 H 1.07995 * 120.03247 * 180.32035 * 7 6 5 33 33 H 1.08999 * 109.47769 * 59.99238 * 10 9 8 34 34 H 1.09001 * 109.46558 * 299.99678 * 10 9 8 35 35 H 1.08999 * 109.47250 * 59.98979 * 11 10 9 36 36 H 1.09001 * 109.47066 * 299.99425 * 11 10 9 37 37 H 1.09007 * 109.47075 * 59.99661 * 12 11 10 38 38 H 1.09001 * 109.47028 * 299.99964 * 12 11 10 39 39 H 0.97001 * 120.00240 * 0.02562 * 15 13 12 40 40 H 1.08993 * 109.47242 * 60.00314 * 16 15 13 41 41 H 1.09001 * 109.47405 * 300.00184 * 16 15 13 42 42 H 1.08998 * 113.61666 * 25.43617 * 19 17 16 43 43 H 1.08994 * 113.61409 * 254.52493 * 19 17 16 44 44 H 1.09002 * 109.47153 * 327.49917 * 22 20 19 45 45 H 1.09001 * 109.46832 * 207.50108 * 22 20 19 46 46 H 0.96701 * 113.99881 * 180.02562 * 23 22 20 47 47 H 1.09002 * 113.60839 * 139.98089 * 24 20 19 48 48 H 1.08996 * 113.62098 * 270.79857 * 24 20 19 49 49 H 1.08002 * 120.03017 * 0.03609 * 25 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9314 -0.7104 -1.2304 5 6 2.7265 -0.0382 -2.1398 6 6 3.1896 -0.6874 -3.2695 7 6 2.8640 -2.0118 -3.4887 8 6 2.0613 -2.6870 -2.5804 9 8 1.7344 -3.9883 -2.7968 10 6 2.2473 -4.5973 -3.9835 11 6 1.7777 -6.0517 -4.0542 12 6 2.3263 -6.7035 -5.3251 13 6 1.8643 -8.1362 -5.3945 14 8 1.1647 -8.5910 -4.5144 15 7 2.2277 -8.9118 -6.4351 16 6 1.7780 -10.3045 -6.5027 17 6 2.3268 -10.9564 -7.7736 18 9 2.2138 -10.1329 -8.8988 19 6 3.7250 -11.5715 -7.5959 20 6 3.2354 -12.7400 -8.4677 21 1 3.5775 -13.7162 -8.1239 22 6 3.4624 -12.5244 -9.9653 23 8 4.7672 -12.9863 -10.3207 24 6 1.8125 -12.3873 -8.0032 25 6 1.5973 -2.0332 -1.4484 26 1 -0.3933 0.4417 -0.7651 27 1 1.7922 -0.5138 0.8901 28 1 1.5613 2.4679 1.2084 29 1 3.5345 1.7703 -0.0321 30 1 2.9864 0.9958 -1.9676 31 1 3.8102 -0.1600 -3.9787 32 1 3.2301 -2.5199 -4.3685 33 1 3.3368 -4.5681 -3.9653 34 1 1.8839 -4.0549 -4.8563 35 1 0.6883 -6.0813 -4.0722 36 1 2.1415 -6.5938 -3.1814 37 1 3.4158 -6.6738 -5.3074 38 1 1.9622 -6.1613 -6.1977 39 1 2.7869 -8.5480 -7.1392 40 1 0.6886 -10.3341 -6.5201 41 1 2.1424 -10.8468 -5.6302 42 1 3.9489 -11.8574 -6.5682 43 1 4.5210 -10.9867 -8.0567 44 1 3.3774 -11.4626 -10.1966 45 1 2.7139 -13.0803 -10.5299 46 1 4.9803 -12.8801 -11.2579 47 1 1.0647 -12.4611 -8.7928 48 1 1.5130 -12.8973 -7.0877 49 1 0.9758 -2.5579 -0.7378 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16500644_4549616.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:03:29 Heat of formation + Delta-G solvation = -157.157060 kcal Electronic energy + Delta-G solvation = -29945.997273 eV Core-core repulsion = 25369.096403 eV Total energy + Delta-G solvation = -4576.900870 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 354.172 amu Computer time = 1.18 seconds Orbital eigenvalues (eV) -49.03072 -41.28129 -40.82968 -39.93930 -39.15176 -37.31974 -37.24332 -35.67226 -34.93645 -32.43591 -31.37251 -30.50800 -28.45899 -27.25130 -26.97024 -26.47144 -23.76484 -23.52108 -22.82287 -21.87066 -21.48445 -20.25487 -19.22916 -18.72339 -18.28403 -17.79841 -17.57078 -17.47483 -17.23138 -17.05893 -16.89215 -16.69600 -16.36826 -16.07233 -16.00181 -15.53760 -15.41731 -15.26541 -14.96877 -14.91208 -14.64731 -14.19193 -14.16359 -14.11917 -13.82157 -13.61625 -13.42814 -13.34880 -13.25914 -13.04100 -12.74173 -12.58283 -12.40351 -12.24715 -11.94211 -11.89966 -11.68453 -11.67477 -11.58794 -11.45509 -10.98838 -10.86590 -10.47798 -10.23753 -9.88736 -9.20911 -5.01983 0.23473 0.43820 1.29274 1.56386 1.64831 1.80124 1.98056 2.27860 2.70471 2.82366 2.94308 3.03750 3.13399 3.32795 3.47074 3.53649 3.65539 3.74800 3.77066 3.80288 3.88697 4.01976 4.06740 4.13153 4.15565 4.21451 4.24975 4.25638 4.32057 4.36753 4.38965 4.42172 4.45933 4.50286 4.54138 4.56497 4.65513 4.68949 4.75702 4.92803 4.94140 4.99813 5.08587 5.13549 5.25648 5.30385 5.39219 5.46402 5.71929 6.31825 6.43155 6.57523 6.58977 7.11089 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.539 6.539 2 C -0.070 4.070 3 Si 0.694 3.306 4 C -0.081 4.081 5 C -0.157 4.157 6 C -0.073 4.073 7 C -0.206 4.206 8 C 0.132 3.868 9 O -0.311 6.311 10 C 0.060 3.940 11 C -0.105 4.105 12 C -0.137 4.137 13 C 0.516 3.484 14 O -0.533 6.533 15 N -0.730 5.730 16 C 0.112 3.888 17 C 0.078 3.922 18 F -0.184 7.184 19 C -0.146 4.146 20 C -0.112 4.112 21 H 0.097 0.903 22 C 0.085 3.915 23 O -0.573 6.573 24 C -0.142 4.142 25 C -0.126 4.126 26 H 0.379 0.621 27 H 0.115 0.885 28 H -0.255 1.255 29 H -0.258 1.258 30 H 0.128 0.872 31 H 0.130 0.870 32 H 0.130 0.870 33 H 0.064 0.936 34 H 0.065 0.935 35 H 0.084 0.916 36 H 0.083 0.917 37 H 0.099 0.901 38 H 0.099 0.901 39 H 0.405 0.595 40 H 0.081 0.919 41 H 0.090 0.910 42 H 0.104 0.896 43 H 0.085 0.915 44 H 0.058 0.942 45 H 0.051 0.949 46 H 0.383 0.617 47 H 0.088 0.912 48 H 0.111 0.889 49 H 0.134 0.866 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.200 0.948 -6.696 7.111 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.344 6.344 2 C -0.181 4.181 3 Si 0.596 3.404 4 C -0.081 4.081 5 C -0.175 4.175 6 C -0.091 4.091 7 C -0.224 4.224 8 C 0.087 3.913 9 O -0.225 6.225 10 C -0.016 4.016 11 C -0.143 4.143 12 C -0.177 4.177 13 C 0.302 3.698 14 O -0.409 6.409 15 N -0.384 5.384 16 C -0.012 4.012 17 C 0.059 3.941 18 F -0.165 7.165 19 C -0.184 4.184 20 C -0.130 4.130 21 H 0.115 0.885 22 C 0.007 3.993 23 O -0.379 6.379 24 C -0.180 4.180 25 C -0.145 4.145 26 H 0.227 0.773 27 H 0.133 0.867 28 H -0.180 1.180 29 H -0.183 1.183 30 H 0.145 0.855 31 H 0.148 0.852 32 H 0.147 0.853 33 H 0.082 0.918 34 H 0.083 0.917 35 H 0.103 0.897 36 H 0.102 0.898 37 H 0.117 0.883 38 H 0.118 0.882 39 H 0.240 0.760 40 H 0.099 0.901 41 H 0.108 0.892 42 H 0.123 0.877 43 H 0.104 0.896 44 H 0.076 0.924 45 H 0.069 0.931 46 H 0.230 0.770 47 H 0.106 0.894 48 H 0.129 0.871 49 H 0.152 0.848 Dipole moment (debyes) X Y Z Total from point charges 2.153 0.642 -4.345 4.891 hybrid contribution 0.502 -0.307 -1.261 1.392 sum 2.655 0.335 -5.606 6.212 Atomic orbital electron populations 1.86517 1.16925 1.81725 1.49213 1.25120 0.85384 1.10241 0.97346 0.94621 0.80915 0.77848 0.87065 1.20143 0.97484 0.93918 0.96572 1.20921 1.01101 0.99835 0.95615 1.20910 0.97838 0.93718 0.96676 1.21315 1.03477 0.96490 1.01148 1.19028 0.94364 0.83474 0.94441 1.86087 1.70889 1.22380 1.43121 1.22822 0.98572 0.93892 0.86280 1.21230 1.03066 0.92305 0.97709 1.21520 1.03108 0.92705 1.00391 1.20582 0.79960 0.88050 0.81181 1.90761 1.37104 1.74933 1.38147 1.45856 1.54573 1.12157 1.25775 1.21813 1.00791 0.82256 0.96340 1.22232 0.99338 0.89673 0.82857 1.92834 1.96851 1.73740 1.53030 1.23674 0.95449 0.97145 1.02083 1.22262 0.95869 1.00491 0.94383 0.88514 1.22064 0.84592 0.98765 0.93848 1.86448 1.33443 1.86613 1.31404 1.23572 0.97361 0.93226 1.03815 1.20273 1.03095 0.93985 0.97122 0.77320 0.86738 1.17980 1.18306 0.85457 0.85222 0.85261 0.91783 0.91698 0.89741 0.89783 0.88281 0.88229 0.76019 0.90072 0.89204 0.87748 0.89601 0.92410 0.93121 0.76967 0.89362 0.87110 0.84789 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.53 12.77 -35.23 -0.45 -0.98 16 2 C -0.07 -0.03 2.82 36.00 0.10 0.07 16 3 Si 0.69 -0.52 29.79 -169.99 -5.06 -5.58 16 4 C -0.08 -0.09 5.39 -104.65 -0.56 -0.65 16 5 C -0.16 0.00 8.67 -39.56 -0.34 -0.34 16 6 C -0.07 0.02 10.04 -39.60 -0.40 -0.38 16 7 C -0.21 -0.08 9.04 -39.43 -0.36 -0.44 16 8 C 0.13 0.29 6.69 -39.22 -0.26 0.03 16 9 O -0.31 -0.78 10.14 -19.43 -0.20 -0.98 16 10 C 0.06 -0.05 4.74 37.16 0.18 0.12 16 11 C -0.11 0.03 4.87 -26.73 -0.13 -0.10 16 12 C -0.14 0.35 5.70 -27.88 -0.16 0.19 16 13 C 0.52 0.31 7.83 -10.99 -0.09 0.22 16 14 O -0.53 -2.65 15.98 5.56 0.09 -2.57 16 15 N -0.73 0.94 5.45 -60.29 -0.33 0.61 16 16 C 0.11 -0.13 5.43 -4.04 -0.02 -0.16 16 17 C 0.08 -0.15 1.73 -89.80 -0.16 -0.30 16 18 F -0.18 0.05 14.80 2.25 0.03 0.08 16 19 C -0.15 0.29 7.07 -25.91 -0.18 0.11 16 20 C -0.11 0.16 4.20 -89.81 -0.38 -0.22 16 21 H 0.10 -0.09 8.14 -51.93 -0.42 -0.52 16 22 C 0.08 -0.08 6.66 37.16 0.25 0.17 16 23 O -0.57 -0.14 13.66 -35.23 -0.48 -0.62 16 24 C -0.14 0.37 7.13 -25.92 -0.18 0.18 16 25 C -0.13 -0.31 9.55 -39.43 -0.38 -0.68 16 26 H 0.38 -1.12 8.70 45.56 0.40 -0.72 16 27 H 0.12 0.11 7.96 -51.93 -0.41 -0.31 16 28 H -0.25 -0.63 7.11 56.52 0.40 -0.22 16 29 H -0.26 -0.38 7.11 56.52 0.40 0.02 16 30 H 0.13 -0.24 4.87 -52.49 -0.26 -0.49 16 31 H 0.13 -0.33 8.06 -52.49 -0.42 -0.75 16 32 H 0.13 -0.22 6.30 -52.49 -0.33 -0.55 16 33 H 0.06 -0.14 7.65 -51.93 -0.40 -0.54 16 34 H 0.06 -0.15 7.67 -51.93 -0.40 -0.54 16 35 H 0.08 0.10 8.10 -51.93 -0.42 -0.32 16 36 H 0.08 0.10 8.10 -51.93 -0.42 -0.32 16 37 H 0.10 -0.45 8.14 -51.93 -0.42 -0.87 16 38 H 0.10 -0.44 8.14 -51.93 -0.42 -0.86 16 39 H 0.40 -1.28 8.03 -40.82 -0.33 -1.61 16 40 H 0.08 -0.02 8.14 -51.93 -0.42 -0.45 16 41 H 0.09 -0.11 7.84 -51.93 -0.41 -0.52 16 42 H 0.10 -0.30 7.89 -51.93 -0.41 -0.71 16 43 H 0.09 -0.11 8.10 -51.93 -0.42 -0.53 16 44 H 0.06 -0.05 6.31 -51.93 -0.33 -0.38 16 45 H 0.05 -0.08 8.14 -51.93 -0.42 -0.51 16 46 H 0.38 -1.46 9.12 45.56 0.42 -1.04 16 47 H 0.09 -0.23 8.10 -51.93 -0.42 -0.65 16 48 H 0.11 -0.42 8.10 -51.93 -0.42 -0.85 16 49 H 0.13 0.38 8.06 -52.49 -0.42 -0.05 16 LS Contribution 404.01 15.07 6.09 6.09 Total: 0.00 -10.30 404.01 -10.10 -20.40 By element: Atomic # 1 Polarization: -7.57 SS G_CDS: -6.72 Total: -14.28 kcal Atomic # 6 Polarization: 0.90 SS G_CDS: -3.07 Total: -2.17 kcal Atomic # 7 Polarization: 0.94 SS G_CDS: -0.33 Total: 0.61 kcal Atomic # 8 Polarization: -4.10 SS G_CDS: -1.04 Total: -5.14 kcal Atomic # 9 Polarization: 0.05 SS G_CDS: 0.03 Total: 0.08 kcal Atomic # 14 Polarization: -0.52 SS G_CDS: -5.06 Total: -5.58 kcal Total LS contribution 6.09 Total: 6.09 kcal Total: -10.30 -10.10 -20.40 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16500644_4549616.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -136.762 kcal (2) G-P(sol) polarization free energy of solvation -10.297 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -147.059 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.098 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.395 kcal (6) G-S(sol) free energy of system = (1) + (5) -157.157 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.19 seconds