Wall clock time and date at job start Sun Mar 7 2021 09:03:36 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50708 * 1 3 3 C 1.36539 * 126.64921 * 2 1 4 4 C 1.46663 * 125.98443 * 359.97438 * 3 2 1 5 5 O 1.21688 * 120.00124 * 0.27642 * 4 3 2 6 6 N 1.34782 * 119.99825 * 180.26861 * 4 3 2 7 7 C 1.46499 * 120.00106 * 180.02562 * 6 4 3 8 8 C 1.52999 * 109.46999 * 180.02562 * 7 6 4 9 9 F 1.39897 * 112.84870 * 316.19741 * 8 7 6 10 10 C 1.53780 * 113.61377 * 87.50196 * 8 7 6 11 11 C 1.53784 * 87.08097 * 89.11683 * 10 8 7 12 12 H 1.09001 * 113.68918 * 270.87261 * 11 10 8 13 13 C 1.53003 * 113.61819 * 139.98131 * 11 10 8 14 14 O 1.42893 * 109.47177 * 87.50309 * 13 11 10 15 15 C 1.53777 * 113.61295 * 185.00156 * 8 7 6 16 16 O 1.34914 * 108.02483 * 180.23224 * 3 2 1 17 17 C 1.33929 * 109.38545 * 359.76300 * 16 3 2 18 18 C 1.50696 * 125.61494 * 179.97438 * 17 16 3 19 19 O 1.42893 * 109.47167 * 270.00300 * 18 17 16 20 20 C 1.35902 * 116.99947 * 180.02562 * 19 18 17 21 21 C 1.38730 * 120.05430 * 359.72428 * 20 19 18 22 22 C 1.38149 * 119.94323 * 179.74221 * 21 20 19 23 23 C 1.38267 * 120.05507 * 0.51270 * 22 21 20 24 24 C 1.50701 * 119.94600 * 179.74135 * 23 22 21 25 25 O 1.42900 * 109.47101 * 245.02358 * 24 23 22 26 26 Si 1.86297 * 109.46987 * 5.02099 * 24 23 22 27 27 C 1.38264 * 120.11190 * 359.76555 * 23 22 21 28 28 C 1.38148 * 120.05444 * 359.97438 * 27 23 22 29 29 C 1.35136 * 108.76488 * 0.02562 * 17 16 3 30 30 H 1.08996 * 109.46933 * 270.18940 * 1 2 3 31 31 H 1.09006 * 109.46803 * 30.18189 * 1 2 3 32 32 H 1.08997 * 109.47007 * 150.18130 * 1 2 3 33 33 H 0.97001 * 119.99861 * 0.02562 * 6 4 3 34 34 H 1.09000 * 109.47060 * 300.00396 * 7 6 4 35 35 H 1.08998 * 109.46765 * 60.00589 * 7 6 4 36 36 H 1.08997 * 113.61546 * 203.65845 * 10 8 7 37 37 H 1.08996 * 113.61731 * 334.57054 * 10 8 7 38 38 H 1.08998 * 109.46733 * 207.49970 * 13 11 10 39 39 H 1.08998 * 109.46794 * 327.50051 * 13 11 10 40 40 H 0.96697 * 114.00512 * 180.02562 * 14 13 11 41 41 H 1.09006 * 113.61473 * 25.43177 * 15 8 7 42 42 H 1.08998 * 113.61418 * 156.25384 * 15 8 7 43 43 H 1.08997 * 109.47455 * 30.00484 * 18 17 16 44 44 H 1.09005 * 109.46770 * 150.00439 * 18 17 16 45 45 H 1.07996 * 120.02942 * 0.02562 * 21 20 19 46 46 H 1.07995 * 119.97504 * 180.23318 * 22 21 20 47 47 H 1.08999 * 109.47013 * 125.02479 * 24 23 22 48 48 H 0.96702 * 114.00269 * 60.00051 * 25 24 23 49 49 H 1.48503 * 109.99707 * 58.68137 * 26 24 23 50 50 H 1.48500 * 110.00139 * 179.97438 * 26 24 23 51 51 H 1.08001 * 119.97693 * 179.97438 * 27 23 22 52 52 H 1.07998 * 120.02750 * 179.97438 * 28 27 23 53 53 H 1.08002 * 126.43745 * 179.97438 * 29 17 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5071 0.0000 0.0000 3 6 2.3221 1.0955 0.0000 4 6 1.8843 2.4952 -0.0005 5 8 0.6969 2.7614 0.0041 6 7 2.7973 3.4868 -0.0059 7 6 2.3600 4.8850 -0.0059 8 6 3.5846 5.8022 -0.0132 9 9 4.5815 5.3845 0.8749 10 6 4.1076 6.1203 -1.4240 11 6 3.1437 7.3186 -1.4258 12 1 2.1505 7.0811 -1.8067 13 6 3.7358 8.5805 -2.0566 14 8 3.4998 8.5644 -3.4658 15 6 3.2367 7.2951 0.1091 16 8 3.6006 0.6646 -0.0052 17 6 3.6184 -0.6746 -0.0033 18 6 4.8550 -1.5358 -0.0082 19 8 5.2392 -1.8100 -1.3569 20 6 6.3436 -2.5806 -1.5394 21 6 7.0464 -3.0582 -0.4427 22 6 8.1657 -3.8459 -0.6308 23 6 8.5917 -4.1495 -1.9107 24 6 9.8164 -5.0040 -2.1130 25 8 10.8378 -4.2305 -2.7459 26 14 10.4301 -5.6105 -0.4618 27 6 7.8963 -3.6699 -3.0053 28 6 6.7734 -2.8863 -2.8225 29 6 2.3448 -1.1262 0.0027 30 1 -0.3633 0.0034 1.0276 31 1 -0.3633 0.8884 -0.5167 32 1 -0.3633 -0.8916 -0.5110 33 1 3.7438 3.2746 -0.0099 34 1 1.7572 5.0772 -0.8934 35 1 1.7653 5.0796 0.8865 36 1 5.1592 6.4059 -1.4457 37 1 3.8593 5.3591 -2.1636 38 1 3.2645 9.4607 -1.6193 39 1 4.8090 8.6116 -1.8682 40 1 3.8493 9.3361 -3.9320 41 1 2.2854 7.4824 0.6071 42 1 4.0499 7.9017 0.5078 43 1 5.6643 -1.0124 0.5009 44 1 4.6471 -2.4730 0.5081 45 1 6.7162 -2.8183 0.5571 46 1 8.7110 -4.2211 0.2225 47 1 9.5641 -5.8573 -2.7426 48 1 11.1126 -3.4532 -2.2405 49 1 9.3658 -6.3897 0.2205 50 1 11.6373 -6.4551 -0.6476 51 1 8.2313 -3.9080 -4.0040 52 1 6.2308 -2.5116 -3.6778 53 1 2.0306 -2.1596 0.0051 There are 75 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 75 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16500644_4549632.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:03:36 Heat of formation + Delta-G solvation = -130.839507 kcal Electronic energy + Delta-G solvation = -37369.531056 eV Core-core repulsion = 32090.410788 eV Total energy + Delta-G solvation = -5279.120269 eV No. of doubly occupied orbitals = 75 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 406.172 amu Computer time = 1.94 seconds Orbital eigenvalues (eV) -48.80631 -43.97927 -41.31014 -40.87974 -39.97748 -39.22299 -37.28420 -37.17978 -36.01438 -35.08383 -33.25356 -32.08485 -31.55963 -30.41074 -28.90660 -28.40413 -27.11652 -26.70225 -26.14643 -24.11935 -22.98053 -22.83758 -22.50579 -22.24405 -21.06367 -20.28731 -19.47987 -19.28720 -18.34163 -18.27355 -17.86751 -17.61864 -17.43138 -17.05135 -16.91048 -16.80451 -16.60939 -16.34262 -16.08011 -15.97167 -15.74577 -15.70175 -15.45192 -15.15393 -14.89844 -14.69494 -14.61203 -14.41337 -14.32668 -14.23968 -14.10429 -13.87392 -13.82137 -13.72130 -13.50834 -13.44700 -13.42319 -12.85092 -12.83937 -12.39137 -12.26262 -12.15733 -12.06673 -12.04672 -11.75213 -11.62017 -11.42360 -11.33884 -10.85006 -10.84117 -10.51237 -10.40177 -10.04192 -9.76737 -9.24344 -4.99197 -0.31659 0.27355 0.30728 0.93181 1.29615 1.34026 1.64819 1.82070 1.87775 1.98858 2.34414 2.65547 2.97175 3.04532 3.19754 3.21053 3.29210 3.44271 3.57079 3.60172 3.62061 3.71688 3.81434 3.88364 3.94646 4.00947 4.06809 4.22945 4.25824 4.31002 4.31648 4.34734 4.41846 4.45381 4.45661 4.49946 4.56313 4.59047 4.63114 4.66259 4.68070 4.69321 4.70991 4.85706 4.92543 4.94480 4.97529 5.03468 5.09259 5.15553 5.25599 5.30000 5.32009 5.50232 5.61892 5.69203 6.15226 6.28005 6.76077 6.79744 6.87230 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.095 4.095 2 C -0.091 4.091 3 C -0.097 4.097 4 C 0.605 3.395 5 O -0.540 6.540 6 N -0.711 5.711 7 C 0.119 3.881 8 C 0.077 3.923 9 F -0.206 7.206 10 C -0.146 4.146 11 C -0.109 4.109 12 H 0.101 0.899 13 C 0.084 3.916 14 O -0.598 6.598 15 C -0.131 4.131 16 O -0.162 6.162 17 C 0.012 3.988 18 C 0.135 3.865 19 O -0.327 6.327 20 C 0.124 3.876 21 C -0.201 4.201 22 C -0.075 4.075 23 C -0.161 4.161 24 C -0.071 4.071 25 O -0.558 6.558 26 Si 0.777 3.223 27 C -0.062 4.062 28 C -0.163 4.163 29 C -0.187 4.187 30 H 0.082 0.918 31 H 0.070 0.930 32 H 0.087 0.913 33 H 0.414 0.586 34 H 0.097 0.903 35 H 0.088 0.912 36 H 0.102 0.898 37 H 0.077 0.923 38 H 0.063 0.937 39 H 0.058 0.942 40 H 0.397 0.603 41 H 0.100 0.900 42 H 0.112 0.888 43 H 0.105 0.895 44 H 0.131 0.869 45 H 0.161 0.839 46 H 0.153 0.847 47 H 0.103 0.897 48 H 0.395 0.605 49 H -0.283 1.283 50 H -0.304 1.304 51 H 0.133 0.867 52 H 0.131 0.869 53 H 0.185 0.815 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.831 3.044 3.704 5.568 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.151 4.151 2 C -0.094 4.094 3 C -0.149 4.149 4 C 0.393 3.607 5 O -0.420 6.420 6 N -0.362 5.362 7 C -0.005 4.005 8 C 0.058 3.942 9 F -0.187 7.187 10 C -0.183 4.183 11 C -0.128 4.128 12 H 0.119 0.881 13 C 0.006 3.994 14 O -0.406 6.406 15 C -0.169 4.169 16 O -0.059 6.059 17 C -0.040 4.040 18 C 0.061 3.939 19 O -0.242 6.242 20 C 0.080 3.920 21 C -0.219 4.219 22 C -0.093 4.093 23 C -0.162 4.162 24 C -0.181 4.181 25 O -0.366 6.366 26 Si 0.683 3.317 27 C -0.080 4.080 28 C -0.182 4.182 29 C -0.206 4.206 30 H 0.100 0.900 31 H 0.089 0.911 32 H 0.106 0.894 33 H 0.251 0.749 34 H 0.115 0.885 35 H 0.107 0.893 36 H 0.121 0.879 37 H 0.095 0.905 38 H 0.081 0.919 39 H 0.076 0.924 40 H 0.247 0.753 41 H 0.119 0.881 42 H 0.131 0.869 43 H 0.123 0.877 44 H 0.148 0.852 45 H 0.178 0.822 46 H 0.170 0.830 47 H 0.121 0.879 48 H 0.245 0.755 49 H -0.210 1.210 50 H -0.232 1.232 51 H 0.151 0.849 52 H 0.149 0.851 53 H 0.202 0.798 Dipole moment (debyes) X Y Z Total from point charges 1.965 1.862 3.790 4.657 hybrid contribution 0.324 0.130 -0.718 0.798 sum 2.289 1.992 3.072 4.318 Atomic orbital electron populations 1.20469 0.87250 1.03916 1.03503 1.20986 0.98513 0.91165 0.98743 1.21772 0.81811 0.94710 1.16615 1.16546 0.85412 0.82252 0.76531 1.90860 1.16525 1.82733 1.51883 1.45679 1.10503 1.05835 1.74203 1.21781 0.95226 0.78553 1.04903 1.22654 0.86139 0.95512 0.89849 1.92843 1.63000 1.91939 1.70888 1.23742 1.01302 0.98929 0.94348 1.22382 1.00245 0.94928 0.95200 0.88106 1.22196 0.99330 0.96938 0.80893 1.86435 1.83357 1.50174 1.20673 1.23590 1.05195 0.92276 0.95803 1.83971 1.28092 1.22704 1.71088 1.22457 0.97094 0.80219 1.04228 1.21266 0.91771 0.98129 0.82703 1.86106 1.42508 1.66418 1.29143 1.19097 0.86525 0.91721 0.94696 1.21497 0.98384 1.03066 0.99000 1.21047 0.95795 0.96108 0.96302 1.20347 0.99288 1.02723 0.93811 1.25139 0.87314 0.96171 1.09500 1.86469 1.55255 1.43829 1.51082 0.93821 0.76865 0.84351 0.76656 1.20926 0.92817 0.94726 0.99518 1.20623 0.99175 1.02977 0.95392 1.21900 0.90834 1.01256 1.06601 0.89957 0.91085 0.89374 0.74941 0.88485 0.89344 0.87924 0.90461 0.91913 0.92355 0.75260 0.88096 0.86928 0.87712 0.85174 0.82155 0.83027 0.87930 0.75527 1.21026 1.23197 0.84928 0.85139 0.79816 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 -0.32 9.81 71.24 0.70 0.38 16 2 C -0.09 -0.49 6.20 -19.74 -0.12 -0.61 16 3 C -0.10 -0.69 7.13 24.07 0.17 -0.52 16 4 C 0.61 4.89 7.79 86.44 0.67 5.57 16 5 O -0.54 -6.87 14.74 -4.31 -0.06 -6.93 16 6 N -0.71 -2.39 5.45 -467.10 -2.54 -4.93 16 7 C 0.12 0.06 5.27 86.38 0.45 0.52 16 8 C 0.08 -0.11 1.91 -10.27 -0.02 -0.13 16 9 F -0.21 -0.56 16.61 44.97 0.75 0.19 16 10 C -0.15 0.28 7.06 31.12 0.22 0.50 16 11 C -0.11 0.35 3.66 -10.26 -0.04 0.31 16 12 H 0.10 -0.18 7.72 -2.39 -0.02 -0.20 16 13 C 0.08 -0.33 6.89 71.98 0.50 0.17 16 14 O -0.60 0.09 13.66 -148.98 -2.03 -1.95 16 15 C -0.13 0.66 7.12 31.12 0.22 0.88 16 16 O -0.16 -0.81 10.40 -5.02 -0.05 -0.86 16 17 C 0.01 0.02 6.94 24.97 0.17 0.19 16 18 C 0.14 -0.56 5.27 71.23 0.38 -0.19 16 19 O -0.33 -0.57 10.12 -92.44 -0.94 -1.51 16 20 C 0.12 0.10 6.69 22.51 0.15 0.25 16 21 C -0.20 0.73 9.04 22.37 0.20 0.93 16 22 C -0.08 0.27 8.66 22.26 0.19 0.47 16 23 C -0.16 0.12 5.35 -19.85 -0.11 0.01 16 24 C -0.07 0.07 2.80 71.24 0.20 0.27 16 25 O -0.56 -0.05 12.83 -148.98 -1.91 -1.97 16 26 Si 0.78 -2.51 29.80 68.60 2.04 -0.46 16 27 C -0.06 -0.08 9.68 22.25 0.22 0.13 16 28 C -0.16 -0.36 9.99 22.37 0.22 -0.14 16 29 C -0.19 -0.23 10.73 22.07 0.24 0.00 16 30 H 0.08 0.18 8.14 -2.39 -0.02 0.16 16 31 H 0.07 0.51 6.46 -2.38 -0.02 0.50 16 32 H 0.09 -0.04 8.14 -2.39 -0.02 -0.06 16 33 H 0.41 0.67 7.78 -92.71 -0.72 -0.05 16 34 H 0.10 0.03 7.39 -2.39 -0.02 0.01 16 35 H 0.09 0.05 8.14 -2.39 -0.02 0.03 16 36 H 0.10 -0.26 7.90 -2.39 -0.02 -0.28 16 37 H 0.08 -0.02 8.10 -2.39 -0.02 -0.04 16 38 H 0.06 -0.39 8.14 -2.39 -0.02 -0.41 16 39 H 0.06 -0.33 7.84 -2.39 -0.02 -0.35 16 40 H 0.40 -3.31 9.12 -74.06 -0.68 -3.99 16 41 H 0.10 -0.70 8.10 -2.38 -0.02 -0.72 16 42 H 0.11 -0.73 8.10 -2.39 -0.02 -0.75 16 43 H 0.10 -0.80 7.65 -2.39 -0.02 -0.82 16 44 H 0.13 -1.30 7.67 -2.38 -0.02 -1.31 16 45 H 0.16 -1.56 6.30 -2.91 -0.02 -1.58 16 46 H 0.15 -1.31 4.90 -2.91 -0.01 -1.32 16 47 H 0.10 0.05 7.96 -2.39 -0.02 0.03 16 48 H 0.39 -3.17 8.70 -74.06 -0.64 -3.82 16 49 H -0.28 -0.30 7.11 99.48 0.71 0.41 16 50 H -0.30 -1.51 7.11 99.48 0.71 -0.80 16 51 H 0.13 0.07 8.06 -2.91 -0.02 0.05 16 52 H 0.13 0.24 8.06 -2.91 -0.02 0.21 16 53 H 0.18 -0.77 8.06 -2.91 -0.02 -0.79 16 Total: 0.00 -24.17 444.22 -1.14 -25.31 By element: Atomic # 1 Polarization: -14.88 SS G_CDS: -1.01 Total: -15.89 kcal Atomic # 6 Polarization: 4.38 SS G_CDS: 4.62 Total: 9.00 kcal Atomic # 7 Polarization: -2.39 SS G_CDS: -2.54 Total: -4.93 kcal Atomic # 8 Polarization: -8.22 SS G_CDS: -5.00 Total: -13.22 kcal Atomic # 9 Polarization: -0.56 SS G_CDS: 0.75 Total: 0.19 kcal Atomic # 14 Polarization: -2.51 SS G_CDS: 2.04 Total: -0.46 kcal Total: -24.17 -1.14 -25.31 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16500644_4549632.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -105.525 kcal (2) G-P(sol) polarization free energy of solvation -24.172 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -129.696 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.143 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.315 kcal (6) G-S(sol) free energy of system = (1) + (5) -130.840 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.94 seconds