Wall clock time and date at job start Sun Mar 7 2021 09:03:42 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86302 * 109.46711 * 2 1 4 4 C 1.50698 * 109.47461 * 119.99923 * 2 1 3 5 5 C 1.38263 * 119.94500 * 64.99949 * 4 2 1 6 6 C 1.38138 * 120.05743 * 180.02562 * 5 4 2 7 7 C 1.38728 * 119.94387 * 0.02562 * 6 5 4 8 8 O 1.35904 * 120.05306 * 180.02562 * 7 6 5 9 9 C 1.42908 * 116.99868 * 180.02562 * 8 7 6 10 10 C 1.50700 * 109.46967 * 179.97438 * 9 8 7 11 11 C 1.36414 * 125.80382 * 89.99699 * 10 9 8 12 12 C 1.47375 * 127.18949 * 359.97438 * 11 10 9 13 13 O 1.21610 * 120.00322 * 359.43281 * 12 11 10 14 14 N 1.34784 * 119.99840 * 179.70617 * 12 11 10 15 15 C 1.46499 * 119.99893 * 179.72634 * 14 12 11 16 16 C 1.53003 * 109.46708 * 180.02562 * 15 14 12 17 17 F 1.39896 * 112.85350 * 48.79874 * 16 15 14 18 18 C 1.53783 * 113.61190 * 179.97438 * 16 15 14 19 19 C 1.53783 * 87.08229 * 139.97785 * 18 16 15 20 20 H 1.08997 * 113.61539 * 220.02144 * 19 18 16 21 21 C 1.53001 * 113.61546 * 89.11327 * 19 18 16 22 22 O 1.42895 * 109.47069 * 175.00029 * 21 19 18 23 23 C 1.53787 * 87.08181 * 334.56734 * 19 18 16 24 24 C 1.47024 * 105.61607 * 179.73601 * 11 10 9 25 25 C 1.34179 * 105.94911 * 0.22593 * 24 11 10 26 26 O 1.33658 * 125.80002 * 270.11455 * 10 9 8 27 27 C 1.38732 * 119.89092 * 0.27601 * 7 6 5 28 28 C 1.38140 * 119.93956 * 359.46781 * 27 7 6 29 29 H 0.96705 * 113.99981 * 59.99824 * 1 2 3 30 30 H 1.08999 * 109.47260 * 239.99987 * 2 1 3 31 31 H 1.48499 * 110.00167 * 60.00157 * 3 2 1 32 32 H 1.48508 * 109.99762 * 181.31969 * 3 2 1 33 33 H 1.08004 * 119.96734 * 359.97438 * 5 4 2 34 34 H 1.08008 * 120.02621 * 179.97438 * 6 5 4 35 35 H 1.08998 * 109.47096 * 59.99519 * 9 8 7 36 36 H 1.08999 * 109.46621 * 299.99428 * 9 8 7 37 37 H 0.97005 * 119.99846 * 359.72422 * 14 12 11 38 38 H 1.08998 * 109.47134 * 299.99552 * 15 14 12 39 39 H 1.08994 * 109.47397 * 59.99843 * 15 14 12 40 40 H 1.08993 * 113.61212 * 254.52620 * 18 16 15 41 41 H 1.09000 * 113.61448 * 25.34594 * 18 16 15 42 42 H 1.09001 * 109.47253 * 295.00428 * 21 19 18 43 43 H 1.09002 * 109.46659 * 54.99950 * 21 19 18 44 44 H 0.96702 * 114.00055 * 179.97438 * 22 21 19 45 45 H 1.09004 * 113.61378 * 270.88693 * 23 19 18 46 46 H 1.08999 * 113.61823 * 139.97673 * 23 19 18 47 47 H 1.07998 * 127.02477 * 180.20779 * 24 11 10 48 48 H 1.08008 * 125.43217 * 179.97438 * 25 24 11 49 49 H 1.07998 * 120.02793 * 179.72697 * 27 7 6 50 50 H 1.08001 * 119.97313 * 180.23513 * 28 27 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9314 -0.7104 1.2304 5 6 1.6841 -2.0604 1.3972 6 6 2.1431 -2.7138 2.5245 7 6 2.8523 -2.0141 3.4899 8 8 3.3054 -2.6548 4.5995 9 6 4.0276 -1.8711 5.5517 10 6 4.4466 -2.7443 6.7063 11 6 5.6145 -3.4436 6.7951 12 6 6.6994 -3.4961 5.7990 13 8 6.5989 -2.8768 4.7573 14 7 7.8005 -4.2351 6.0403 15 6 8.8763 -4.2921 5.0475 16 6 9.9997 -5.1932 5.5642 17 9 9.5335 -6.4219 6.0438 18 6 11.1835 -5.3213 4.5909 19 6 12.1020 -5.2469 5.8221 20 1 12.9988 -4.6483 5.6622 21 6 12.4001 -6.6109 6.4477 22 8 13.3475 -6.4528 7.5057 23 6 10.9677 -4.4817 6.5243 24 6 5.5672 -4.1293 8.0948 25 6 4.3947 -3.7867 8.6501 26 8 3.7362 -2.9668 7.8163 27 6 3.0937 -0.6581 3.3232 28 6 2.6372 -0.0105 2.1916 29 1 -0.3933 0.4417 -0.7651 30 1 1.7924 -0.5138 -0.8900 31 1 1.5614 2.4679 1.2085 32 1 3.5346 1.7704 -0.0321 33 1 1.1309 -2.6044 0.6459 34 1 1.9493 -3.7684 2.6545 35 1 3.3903 -1.0662 5.9178 36 1 4.9122 -1.4469 5.0767 37 1 7.8806 -4.7291 6.8713 38 1 8.4873 -4.6966 4.1131 39 1 9.2652 -3.2886 4.8751 40 1 11.2223 -6.2804 4.0746 41 1 11.2871 -4.4723 3.9153 42 1 11.4791 -7.0374 6.8453 43 1 12.8108 -7.2768 5.6887 44 1 13.5835 -7.2792 7.9491 45 1 11.0132 -3.4025 6.3780 46 1 10.8324 -4.7631 7.5686 47 1 6.3219 -4.7767 8.5164 48 1 4.0378 -4.1182 9.6140 49 1 3.6417 -0.1103 4.0755 50 1 2.8281 1.0442 2.0596 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16500644_4549634.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:03:42 Heat of formation + Delta-G solvation = -119.822134 kcal Electronic energy + Delta-G solvation = -35906.438483 eV Core-core repulsion = 30783.333582 eV Total energy + Delta-G solvation = -5123.104900 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 392.156 amu Computer time = 1.48 seconds Orbital eigenvalues (eV) -48.99767 -43.75382 -41.18861 -40.60052 -39.84560 -39.04824 -37.27760 -37.17716 -35.64890 -34.13050 -32.87876 -31.94146 -31.42461 -30.44110 -28.04031 -27.25624 -26.94214 -26.01848 -24.44857 -23.76668 -23.02568 -22.23536 -21.96919 -21.11636 -20.23373 -19.41515 -19.31330 -18.52785 -18.34562 -17.72643 -17.50042 -17.29657 -17.12046 -16.89954 -16.79873 -16.62429 -16.53048 -16.15605 -15.85869 -15.79411 -15.55835 -15.43450 -15.30829 -15.09561 -14.64226 -14.41779 -14.29820 -14.21457 -13.97603 -13.81942 -13.76842 -13.70564 -13.59609 -13.44161 -13.35124 -13.02443 -12.58432 -12.38416 -12.08697 -11.92970 -11.85764 -11.77130 -11.67056 -11.44072 -11.06311 -10.98388 -10.88389 -10.25873 -10.25006 -9.96468 -9.88434 -9.12090 -4.94249 0.01390 0.35556 0.38916 0.91469 1.32878 1.46893 1.67617 1.97493 2.01040 2.14573 2.51311 2.70635 2.83470 2.96335 3.05350 3.14135 3.27708 3.33818 3.48199 3.59671 3.65237 3.72967 3.75616 3.86958 3.91027 4.01696 4.08492 4.13606 4.26203 4.31508 4.31569 4.32749 4.38012 4.42649 4.43486 4.47928 4.52814 4.53901 4.58500 4.69958 4.72035 4.73251 4.76743 4.94556 4.99544 5.08061 5.11050 5.22869 5.25179 5.32315 5.56670 5.74767 5.82985 6.34476 6.35389 6.58539 6.67553 7.09903 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.546 6.546 2 C -0.066 4.066 3 Si 0.680 3.320 4 C -0.114 4.114 5 C -0.048 4.048 6 C -0.146 4.146 7 C 0.143 3.857 8 O -0.302 6.302 9 C 0.135 3.865 10 C 0.066 3.934 11 C -0.210 4.210 12 C 0.591 3.409 13 O -0.532 6.532 14 N -0.719 5.719 15 C 0.114 3.886 16 C 0.077 3.923 17 F -0.184 7.184 18 C -0.141 4.141 19 C -0.111 4.111 20 H 0.097 0.903 21 C 0.085 3.915 22 O -0.573 6.573 23 C -0.146 4.146 24 C -0.195 4.195 25 C -0.014 4.014 26 O -0.164 6.164 27 C -0.200 4.200 28 C -0.081 4.081 29 H 0.381 0.619 30 H 0.073 0.927 31 H -0.251 1.251 32 H -0.255 1.255 33 H 0.135 0.865 34 H 0.136 0.864 35 H 0.083 0.917 36 H 0.115 0.885 37 H 0.405 0.595 38 H 0.083 0.917 39 H 0.092 0.908 40 H 0.088 0.912 41 H 0.111 0.889 42 H 0.058 0.942 43 H 0.051 0.949 44 H 0.383 0.617 45 H 0.104 0.896 46 H 0.085 0.915 47 H 0.162 0.838 48 H 0.215 0.785 49 H 0.132 0.868 50 H 0.121 0.879 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.931 -0.279 -0.142 1.956 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.353 6.353 2 C -0.176 4.176 3 Si 0.581 3.419 4 C -0.114 4.114 5 C -0.067 4.067 6 C -0.165 4.165 7 C 0.098 3.902 8 O -0.216 6.216 9 C 0.060 3.940 10 C 0.013 3.987 11 C -0.215 4.215 12 C 0.379 3.621 13 O -0.410 6.410 14 N -0.372 5.372 15 C -0.010 4.010 16 C 0.058 3.942 17 F -0.164 7.164 18 C -0.179 4.179 19 C -0.129 4.129 20 H 0.115 0.885 21 C 0.007 3.993 22 O -0.379 6.379 23 C -0.184 4.184 24 C -0.214 4.214 25 C -0.080 4.080 26 O -0.059 6.059 27 C -0.219 4.219 28 C -0.098 4.098 29 H 0.228 0.772 30 H 0.091 0.909 31 H -0.176 1.176 32 H -0.180 1.180 33 H 0.153 0.847 34 H 0.154 0.846 35 H 0.102 0.898 36 H 0.133 0.867 37 H 0.240 0.760 38 H 0.101 0.899 39 H 0.110 0.890 40 H 0.107 0.893 41 H 0.129 0.871 42 H 0.076 0.924 43 H 0.069 0.931 44 H 0.230 0.770 45 H 0.123 0.877 46 H 0.104 0.896 47 H 0.180 0.820 48 H 0.232 0.768 49 H 0.149 0.851 50 H 0.138 0.862 Dipole moment (debyes) X Y Z Total from point charges 2.095 0.959 0.036 2.304 hybrid contribution 0.400 -1.585 1.062 1.950 sum 2.494 -0.626 1.098 2.796 Atomic orbital electron populations 1.86502 1.17368 1.81769 1.49618 1.24601 0.85556 1.10115 0.97366 0.95453 0.80820 0.78292 0.87289 1.19231 1.01629 0.94455 0.96104 1.20811 0.96175 0.93351 0.96320 1.20495 1.01527 1.00899 0.93576 1.18922 0.93940 0.90790 0.86595 1.86091 1.68725 1.37733 1.29060 1.21109 0.98352 0.90380 0.84113 1.21925 0.90083 0.99115 0.87593 1.21159 0.97546 1.05099 0.97682 1.17151 0.80892 0.78774 0.85277 1.90809 1.79618 1.44533 1.26089 1.45569 1.18564 1.50621 1.22410 1.21825 0.86378 1.00251 0.92541 1.22233 0.93099 0.81314 0.97518 1.92847 1.89826 1.44550 1.89185 1.23562 0.92655 1.05078 0.96595 1.22257 0.98572 0.96753 0.95344 0.88494 1.22065 0.92298 0.95428 0.89486 1.86446 1.63622 1.37037 1.50800 1.23668 0.93941 1.00887 0.99881 1.22902 0.99826 1.04446 0.94275 1.24071 0.92871 0.94532 0.96554 1.83803 1.43796 1.53304 1.25027 1.21120 1.06471 0.93850 1.00454 1.20654 0.97350 0.98639 0.93199 0.77150 0.90886 1.17634 1.17982 0.84672 0.84640 0.89846 0.86701 0.75988 0.89903 0.89017 0.89314 0.87107 0.92397 0.93104 0.76966 0.87736 0.89593 0.82049 0.76833 0.85056 0.86201 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -0.56 12.81 -35.23 -0.45 -1.01 16 2 C -0.07 -0.06 2.79 36.00 0.10 0.04 16 3 Si 0.68 -0.11 29.85 -169.99 -5.07 -5.18 16 4 C -0.11 -0.41 5.38 -104.60 -0.56 -0.97 16 5 C -0.05 -0.16 9.68 -39.61 -0.38 -0.54 16 6 C -0.15 -0.56 9.99 -39.44 -0.39 -0.96 16 7 C 0.14 0.65 6.69 -39.22 -0.26 0.39 16 8 O -0.30 -1.47 10.12 -19.44 -0.20 -1.67 16 9 C 0.14 0.37 4.73 36.01 0.17 0.54 16 10 C 0.07 0.19 7.00 -34.97 -0.24 -0.05 16 11 C -0.21 -0.51 6.31 -103.28 -0.65 -1.16 16 12 C 0.59 1.93 7.81 -12.54 -0.10 1.83 16 13 O -0.53 -3.24 14.85 5.27 0.08 -3.16 16 14 N -0.72 -0.40 5.46 -61.40 -0.34 -0.74 16 15 C 0.11 -0.04 5.36 -4.04 -0.02 -0.06 16 16 C 0.08 -0.09 1.66 -89.80 -0.15 -0.24 16 17 F -0.18 -0.11 15.01 2.25 0.03 -0.07 16 18 C -0.14 0.31 7.13 -25.92 -0.18 0.12 16 19 C -0.11 0.12 4.20 -89.80 -0.38 -0.25 16 20 H 0.10 -0.07 8.14 -51.93 -0.42 -0.50 16 21 C 0.08 -0.05 6.66 37.16 0.25 0.20 16 22 O -0.57 -0.28 13.66 -35.23 -0.48 -0.76 16 23 C -0.15 0.23 7.07 -25.91 -0.18 0.04 16 24 C -0.20 0.08 10.60 -37.45 -0.40 -0.32 16 25 C -0.01 0.01 12.03 29.30 0.35 0.36 16 26 O -0.16 -0.33 10.52 7.67 0.08 -0.25 16 27 C -0.20 -0.74 9.04 -39.43 -0.36 -1.10 16 28 C -0.08 -0.31 8.66 -39.61 -0.34 -0.66 16 29 H 0.38 -1.57 8.74 45.56 0.40 -1.17 16 30 H 0.07 -0.06 7.96 -51.93 -0.41 -0.47 16 31 H -0.25 -0.73 7.04 56.52 0.40 -0.33 16 32 H -0.25 -0.61 7.11 56.52 0.40 -0.21 16 33 H 0.14 0.20 8.06 -52.48 -0.42 -0.22 16 34 H 0.14 0.34 8.06 -52.48 -0.42 -0.08 16 35 H 0.08 0.06 7.65 -51.93 -0.40 -0.34 16 36 H 0.12 0.33 6.03 -51.93 -0.31 0.02 16 37 H 0.41 -0.45 7.36 -40.82 -0.30 -0.75 16 38 H 0.08 0.05 8.14 -51.93 -0.42 -0.37 16 39 H 0.09 -0.08 7.94 -51.93 -0.41 -0.49 16 40 H 0.09 -0.20 8.10 -51.93 -0.42 -0.62 16 41 H 0.11 -0.39 8.10 -51.93 -0.42 -0.81 16 42 H 0.06 -0.03 6.31 -51.93 -0.33 -0.36 16 43 H 0.05 -0.07 8.14 -51.93 -0.42 -0.49 16 44 H 0.38 -1.37 9.12 45.56 0.42 -0.95 16 45 H 0.10 -0.26 7.96 -51.93 -0.41 -0.67 16 46 H 0.09 -0.08 8.10 -51.93 -0.42 -0.50 16 47 H 0.16 -0.51 7.74 -52.49 -0.41 -0.91 16 48 H 0.22 -1.02 8.06 -52.48 -0.42 -1.45 16 49 H 0.13 0.21 6.30 -52.49 -0.33 -0.12 16 50 H 0.12 0.36 4.86 -52.49 -0.26 0.10 16 LS Contribution 420.11 15.07 6.33 6.33 Total: 0.00 -11.48 420.11 -9.51 -20.99 By element: Atomic # 1 Polarization: -5.93 SS G_CDS: -5.76 Total: -11.68 kcal Atomic # 6 Polarization: 0.95 SS G_CDS: -3.74 Total: -2.79 kcal Atomic # 7 Polarization: -0.40 SS G_CDS: -0.34 Total: -0.74 kcal Atomic # 8 Polarization: -5.89 SS G_CDS: -0.97 Total: -6.86 kcal Atomic # 9 Polarization: -0.11 SS G_CDS: 0.03 Total: -0.07 kcal Atomic # 14 Polarization: -0.11 SS G_CDS: -5.07 Total: -5.18 kcal Total LS contribution 6.33 Total: 6.33 kcal Total: -11.48 -9.51 -20.99 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16500644_4549634.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -98.832 kcal (2) G-P(sol) polarization free energy of solvation -11.481 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -110.313 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.509 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.990 kcal (6) G-S(sol) free energy of system = (1) + (5) -119.822 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.49 seconds