Wall clock time and date at job start Sun Mar 7 2021 09:03:41 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86302 * 109.46711 * 2 1 4 4 C 1.50698 * 109.47461 * 119.99923 * 2 1 3 5 5 C 1.38263 * 119.94500 * 64.99949 * 4 2 1 6 6 C 1.38138 * 120.05743 * 180.02562 * 5 4 2 7 7 C 1.38728 * 119.94387 * 0.02562 * 6 5 4 8 8 O 1.35904 * 120.05306 * 180.02562 * 7 6 5 9 9 C 1.42908 * 116.99868 * 180.02562 * 8 7 6 10 10 C 1.50700 * 109.46967 * 179.97438 * 9 8 7 11 11 C 1.36414 * 125.80382 * 89.99699 * 10 9 8 12 12 C 1.47375 * 127.18949 * 359.97438 * 11 10 9 13 13 O 1.21610 * 120.00322 * 359.43281 * 12 11 10 14 14 N 1.34784 * 119.99840 * 179.70617 * 12 11 10 15 15 C 1.46499 * 119.99893 * 179.72634 * 14 12 11 16 16 C 1.53003 * 109.46708 * 180.02562 * 15 14 12 17 17 F 1.39896 * 112.85350 * 48.79874 * 16 15 14 18 18 C 1.53783 * 113.61190 * 179.97438 * 16 15 14 19 19 C 1.53783 * 87.08229 * 139.97785 * 18 16 15 20 20 H 1.08997 * 113.61539 * 220.02144 * 19 18 16 21 21 C 1.53001 * 113.61546 * 89.11327 * 19 18 16 22 22 O 1.42895 * 109.47069 * 175.00029 * 21 19 18 23 23 C 1.53787 * 87.08181 * 334.56734 * 19 18 16 24 24 C 1.47024 * 105.61607 * 179.73601 * 11 10 9 25 25 C 1.34179 * 105.94911 * 0.22593 * 24 11 10 26 26 O 1.33658 * 125.80002 * 270.11455 * 10 9 8 27 27 C 1.38732 * 119.89092 * 0.27601 * 7 6 5 28 28 C 1.38140 * 119.93956 * 359.46781 * 27 7 6 29 29 H 0.96705 * 113.99981 * 59.99824 * 1 2 3 30 30 H 1.08999 * 109.47260 * 239.99987 * 2 1 3 31 31 H 1.48499 * 110.00167 * 60.00157 * 3 2 1 32 32 H 1.48508 * 109.99762 * 181.31969 * 3 2 1 33 33 H 1.08004 * 119.96734 * 359.97438 * 5 4 2 34 34 H 1.08008 * 120.02621 * 179.97438 * 6 5 4 35 35 H 1.08998 * 109.47096 * 59.99519 * 9 8 7 36 36 H 1.08999 * 109.46621 * 299.99428 * 9 8 7 37 37 H 0.97005 * 119.99846 * 359.72422 * 14 12 11 38 38 H 1.08998 * 109.47134 * 299.99552 * 15 14 12 39 39 H 1.08994 * 109.47397 * 59.99843 * 15 14 12 40 40 H 1.08993 * 113.61212 * 254.52620 * 18 16 15 41 41 H 1.09000 * 113.61448 * 25.34594 * 18 16 15 42 42 H 1.09001 * 109.47253 * 295.00428 * 21 19 18 43 43 H 1.09002 * 109.46659 * 54.99950 * 21 19 18 44 44 H 0.96702 * 114.00055 * 179.97438 * 22 21 19 45 45 H 1.09004 * 113.61378 * 270.88693 * 23 19 18 46 46 H 1.08999 * 113.61823 * 139.97673 * 23 19 18 47 47 H 1.07998 * 127.02477 * 180.20779 * 24 11 10 48 48 H 1.08008 * 125.43217 * 179.97438 * 25 24 11 49 49 H 1.07998 * 120.02793 * 179.72697 * 27 7 6 50 50 H 1.08001 * 119.97313 * 180.23513 * 28 27 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9314 -0.7104 1.2304 5 6 1.6841 -2.0604 1.3972 6 6 2.1431 -2.7138 2.5245 7 6 2.8523 -2.0141 3.4899 8 8 3.3054 -2.6548 4.5995 9 6 4.0276 -1.8711 5.5517 10 6 4.4466 -2.7443 6.7063 11 6 5.6145 -3.4436 6.7951 12 6 6.6994 -3.4961 5.7990 13 8 6.5989 -2.8768 4.7573 14 7 7.8005 -4.2351 6.0403 15 6 8.8763 -4.2921 5.0475 16 6 9.9997 -5.1932 5.5642 17 9 9.5335 -6.4219 6.0438 18 6 11.1835 -5.3213 4.5909 19 6 12.1020 -5.2469 5.8221 20 1 12.9988 -4.6483 5.6622 21 6 12.4001 -6.6109 6.4477 22 8 13.3475 -6.4528 7.5057 23 6 10.9677 -4.4817 6.5243 24 6 5.5672 -4.1293 8.0948 25 6 4.3947 -3.7867 8.6501 26 8 3.7362 -2.9668 7.8163 27 6 3.0937 -0.6581 3.3232 28 6 2.6372 -0.0105 2.1916 29 1 -0.3933 0.4417 -0.7651 30 1 1.7924 -0.5138 -0.8900 31 1 1.5614 2.4679 1.2085 32 1 3.5346 1.7704 -0.0321 33 1 1.1309 -2.6044 0.6459 34 1 1.9493 -3.7684 2.6545 35 1 3.3903 -1.0662 5.9178 36 1 4.9122 -1.4469 5.0767 37 1 7.8806 -4.7291 6.8713 38 1 8.4873 -4.6966 4.1131 39 1 9.2652 -3.2886 4.8751 40 1 11.2223 -6.2804 4.0746 41 1 11.2871 -4.4723 3.9153 42 1 11.4791 -7.0374 6.8453 43 1 12.8108 -7.2768 5.6887 44 1 13.5835 -7.2792 7.9491 45 1 11.0132 -3.4025 6.3780 46 1 10.8324 -4.7631 7.5686 47 1 6.3219 -4.7767 8.5164 48 1 4.0378 -4.1182 9.6140 49 1 3.6417 -0.1103 4.0755 50 1 2.8281 1.0442 2.0596 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16500644_4549634.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:03:41 Heat of formation + Delta-G solvation = -123.643311 kcal Electronic energy + Delta-G solvation = -35906.604182 eV Core-core repulsion = 30783.333582 eV Total energy + Delta-G solvation = -5123.270599 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 392.156 amu Computer time = 1.72 seconds Orbital eigenvalues (eV) -48.98581 -43.80766 -41.42770 -40.74991 -39.81624 -39.24177 -37.28204 -37.22873 -35.78361 -34.20637 -33.01842 -32.15724 -31.57768 -30.45104 -28.11872 -27.15781 -26.91812 -26.15698 -24.56037 -23.95754 -22.98994 -22.38452 -22.08330 -21.21413 -20.16031 -19.65911 -19.36128 -18.49269 -18.36802 -17.84151 -17.54959 -17.38303 -17.15483 -17.00360 -16.93855 -16.79060 -16.59670 -16.22793 -15.96568 -15.87550 -15.66713 -15.43312 -15.37846 -15.12049 -14.76791 -14.56871 -14.38591 -14.28882 -14.02310 -13.95694 -13.87749 -13.74844 -13.58790 -13.51554 -13.22613 -13.17281 -12.55364 -12.50189 -12.29776 -12.06122 -11.91201 -11.83638 -11.65215 -11.35207 -11.25648 -11.06522 -10.82950 -10.36123 -10.29953 -10.21730 -9.92301 -9.37879 -4.96373 -0.14384 0.08257 0.13765 0.94968 1.30034 1.40587 1.63051 1.88873 1.96004 1.99139 2.34928 2.46808 2.96431 3.06785 3.13064 3.21126 3.23444 3.40263 3.44642 3.51590 3.52828 3.62678 3.69093 3.79949 3.86157 3.91655 3.98923 4.11410 4.17531 4.28088 4.33241 4.37135 4.38273 4.38924 4.44713 4.52741 4.55537 4.58139 4.62132 4.66169 4.72054 4.77578 4.82933 4.88867 4.99547 5.00927 5.06217 5.13591 5.19858 5.25780 5.32074 5.52730 5.79379 6.10218 6.25422 6.80766 6.92817 6.93779 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.564 6.564 2 C -0.073 4.073 3 Si 0.773 3.227 4 C -0.128 4.128 5 C -0.053 4.053 6 C -0.157 4.157 7 C 0.125 3.875 8 O -0.318 6.318 9 C 0.134 3.866 10 C 0.042 3.958 11 C -0.223 4.223 12 C 0.586 3.414 13 O -0.569 6.569 14 N -0.708 5.708 15 C 0.114 3.886 16 C 0.080 3.920 17 F -0.194 7.194 18 C -0.134 4.134 19 C -0.116 4.116 20 H 0.094 0.906 21 C 0.083 3.917 22 O -0.593 6.593 23 C -0.142 4.142 24 C -0.198 4.198 25 C -0.008 4.008 26 O -0.176 6.176 27 C -0.206 4.206 28 C -0.098 4.098 29 H 0.403 0.597 30 H 0.096 0.904 31 H -0.296 1.296 32 H -0.291 1.291 33 H 0.153 0.847 34 H 0.143 0.857 35 H 0.098 0.902 36 H 0.107 0.893 37 H 0.414 0.586 38 H 0.073 0.927 39 H 0.098 0.902 40 H 0.090 0.910 41 H 0.126 0.874 42 H 0.055 0.945 43 H 0.057 0.943 44 H 0.397 0.603 45 H 0.114 0.886 46 H 0.080 0.920 47 H 0.189 0.811 48 H 0.255 0.745 49 H 0.144 0.856 50 H 0.123 0.877 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.945 -0.746 -0.002 2.083 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.374 6.374 2 C -0.183 4.183 3 Si 0.680 3.320 4 C -0.129 4.129 5 C -0.071 4.071 6 C -0.175 4.175 7 C 0.080 3.920 8 O -0.233 6.233 9 C 0.060 3.940 10 C -0.011 4.011 11 C -0.228 4.228 12 C 0.374 3.626 13 O -0.450 6.450 14 N -0.359 5.359 15 C -0.010 4.010 16 C 0.061 3.939 17 F -0.174 7.174 18 C -0.172 4.172 19 C -0.135 4.135 20 H 0.112 0.888 21 C 0.005 3.995 22 O -0.402 6.402 23 C -0.179 4.179 24 C -0.217 4.217 25 C -0.073 4.073 26 O -0.071 6.071 27 C -0.225 4.225 28 C -0.116 4.116 29 H 0.254 0.746 30 H 0.113 0.887 31 H -0.225 1.225 32 H -0.219 1.219 33 H 0.171 0.829 34 H 0.161 0.839 35 H 0.116 0.884 36 H 0.125 0.875 37 H 0.251 0.749 38 H 0.091 0.909 39 H 0.116 0.884 40 H 0.109 0.891 41 H 0.144 0.856 42 H 0.073 0.927 43 H 0.075 0.925 44 H 0.247 0.753 45 H 0.133 0.867 46 H 0.099 0.901 47 H 0.206 0.794 48 H 0.270 0.730 49 H 0.162 0.838 50 H 0.140 0.860 Dipole moment (debyes) X Y Z Total from point charges 2.108 0.455 0.169 2.163 hybrid contribution 0.430 -1.474 1.100 1.889 sum 2.538 -1.019 1.269 3.014 Atomic orbital electron populations 1.86447 1.17177 1.82378 1.51387 1.24735 0.85866 1.10744 0.96926 0.94518 0.77230 0.75648 0.84624 1.19668 1.01281 0.94927 0.96998 1.21055 0.96087 0.93471 0.96450 1.20741 1.01518 1.01452 0.93793 1.19133 0.94627 0.91267 0.86952 1.86057 1.69049 1.38667 1.29483 1.21138 0.98125 0.90795 0.83941 1.21968 0.90742 1.00255 0.88156 1.21344 0.97165 1.05524 0.98738 1.17386 0.81558 0.78628 0.85021 1.90785 1.80425 1.46195 1.27579 1.45523 1.17973 1.49645 1.22804 1.21892 0.86314 1.00817 0.92010 1.22254 0.92824 0.80689 0.98122 1.92826 1.89998 1.45250 1.89374 1.23594 0.91351 1.05899 0.96347 1.22296 0.98638 0.96593 0.95940 0.88765 1.22120 0.92036 0.95858 0.89457 1.86404 1.63878 1.38628 1.51278 1.23670 0.93445 1.01419 0.99383 1.23234 1.00838 1.04627 0.93003 1.24937 0.92400 0.92892 0.97103 1.83798 1.44281 1.53985 1.25083 1.21314 1.06448 0.93859 1.00874 1.20848 0.98042 0.98975 0.93694 0.74555 0.88670 1.22455 1.21882 0.82909 0.83874 0.88408 0.87517 0.74934 0.90905 0.88366 0.89120 0.85580 0.92705 0.92465 0.75265 0.86724 0.90146 0.79376 0.72961 0.83822 0.85992 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -0.68 12.81 -148.98 -1.91 -2.59 16 2 C -0.07 -0.10 2.79 71.24 0.20 0.10 16 3 Si 0.77 -0.08 29.85 68.60 2.05 1.96 16 4 C -0.13 -1.01 5.38 -19.85 -0.11 -1.11 16 5 C -0.05 -0.38 9.68 22.25 0.22 -0.16 16 6 C -0.16 -1.43 9.99 22.36 0.22 -1.21 16 7 C 0.13 1.40 6.69 22.50 0.15 1.55 16 8 O -0.32 -3.82 10.12 -92.46 -0.94 -4.76 16 9 C 0.13 1.03 4.73 71.24 0.34 1.37 16 10 C 0.04 0.30 7.00 25.26 0.18 0.48 16 11 C -0.22 -1.28 6.31 -18.99 -0.12 -1.40 16 12 C 0.59 4.60 7.81 86.65 0.68 5.27 16 13 O -0.57 -8.18 14.85 -4.06 -0.06 -8.24 16 14 N -0.71 -1.17 5.46 -466.42 -2.55 -3.71 16 15 C 0.11 -0.02 5.36 86.38 0.46 0.45 16 16 C 0.08 -0.20 1.66 -10.26 -0.02 -0.22 16 17 F -0.19 -0.23 15.01 44.97 0.68 0.44 16 18 C -0.13 0.64 7.13 31.12 0.22 0.86 16 19 C -0.12 0.28 4.20 -10.26 -0.04 0.24 16 20 H 0.09 -0.16 8.14 -2.39 -0.02 -0.18 16 21 C 0.08 -0.10 6.66 71.98 0.48 0.38 16 22 O -0.59 -0.57 13.66 -148.98 -2.03 -2.60 16 23 C -0.14 0.47 7.07 31.12 0.22 0.69 16 24 C -0.20 0.30 10.60 23.65 0.25 0.55 16 25 C -0.01 0.02 12.03 66.89 0.80 0.83 16 26 O -0.18 -0.77 10.52 4.52 0.05 -0.72 16 27 C -0.21 -1.94 9.04 22.36 0.20 -1.74 16 28 C -0.10 -0.91 8.66 22.25 0.19 -0.72 16 29 H 0.40 -3.90 8.74 -74.05 -0.65 -4.54 16 30 H 0.10 -0.28 7.96 -2.39 -0.02 -0.30 16 31 H -0.30 -2.14 7.04 99.48 0.70 -1.44 16 32 H -0.29 -1.68 7.11 99.48 0.71 -0.97 16 33 H 0.15 0.42 8.06 -2.91 -0.02 0.40 16 34 H 0.14 0.92 8.06 -2.91 -0.02 0.90 16 35 H 0.10 0.33 7.65 -2.39 -0.02 0.31 16 36 H 0.11 0.93 6.03 -2.39 -0.01 0.91 16 37 H 0.41 -0.95 7.36 -92.70 -0.68 -1.63 16 38 H 0.07 0.16 8.14 -2.39 -0.02 0.14 16 39 H 0.10 -0.12 7.94 -2.39 -0.02 -0.14 16 40 H 0.09 -0.44 8.10 -2.39 -0.02 -0.46 16 41 H 0.13 -0.99 8.10 -2.39 -0.02 -1.01 16 42 H 0.05 -0.05 6.31 -2.39 -0.02 -0.06 16 43 H 0.06 -0.17 8.14 -2.39 -0.02 -0.19 16 44 H 0.40 -2.83 9.12 -74.06 -0.68 -3.51 16 45 H 0.11 -0.62 7.96 -2.39 -0.02 -0.64 16 46 H 0.08 -0.16 8.10 -2.39 -0.02 -0.18 16 47 H 0.19 -1.50 7.74 -2.91 -0.02 -1.52 16 48 H 0.25 -3.06 8.06 -2.91 -0.02 -3.09 16 49 H 0.14 0.78 6.30 -2.91 -0.02 0.76 16 50 H 0.12 0.95 4.86 -2.91 -0.01 0.94 16 Total: 0.00 -28.38 420.11 -1.13 -29.51 By element: Atomic # 1 Polarization: -14.55 SS G_CDS: -0.94 Total: -15.50 kcal Atomic # 6 Polarization: 1.67 SS G_CDS: 4.53 Total: 6.20 kcal Atomic # 7 Polarization: -1.17 SS G_CDS: -2.55 Total: -3.71 kcal Atomic # 8 Polarization: -14.01 SS G_CDS: -4.89 Total: -18.91 kcal Atomic # 9 Polarization: -0.23 SS G_CDS: 0.68 Total: 0.44 kcal Atomic # 14 Polarization: -0.08 SS G_CDS: 2.05 Total: 1.96 kcal Total: -28.38 -1.13 -29.51 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16500644_4549634.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -94.130 kcal (2) G-P(sol) polarization free energy of solvation -28.379 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -122.509 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.134 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -29.513 kcal (6) G-S(sol) free energy of system = (1) + (5) -123.643 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.72 seconds