Wall clock time and date at job start Sun Mar 7 2021 09:03:45 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42896 * 1 3 3 C 1.35997 * 116.99962 * 2 1 4 4 C 1.39157 * 120.07185 * 180.02562 * 3 2 1 5 5 O 1.35994 * 120.07152 * 359.94886 * 4 3 2 6 6 C 1.42903 * 116.99566 * 180.02562 * 5 4 3 7 7 C 1.50703 * 109.46904 * 179.97438 * 6 5 4 8 8 O 1.21278 * 119.99985 * 0.02562 * 7 6 5 9 9 N 1.34779 * 119.99944 * 180.02562 * 7 6 5 10 10 C 1.46499 * 119.99872 * 180.02562 * 9 7 6 11 11 C 1.53000 * 109.46840 * 180.02562 * 10 9 7 12 12 F 1.39900 * 112.84807 * 314.66198 * 11 10 9 13 13 C 1.53778 * 113.61854 * 85.86223 * 11 10 9 14 14 C 1.54058 * 86.98600 * 89.15808 * 13 11 10 15 15 H 1.08993 * 113.68813 * 270.87639 * 14 13 11 16 16 C 1.52996 * 113.61555 * 139.97921 * 14 13 11 17 17 O 1.42907 * 109.46860 * 87.50873 * 16 14 13 18 18 C 1.53782 * 87.07427 * 25.43353 * 14 13 11 19 19 C 1.38564 * 119.85311 * 180.22655 * 4 3 2 20 20 C 1.38247 * 119.99575 * 359.49173 * 19 4 3 21 21 N 1.48012 * 119.92372 * 180.25025 * 20 19 4 22 22 O 1.21798 * 119.99737 * 0.25749 * 21 20 19 23 23 O 1.21803 * 120.00017 * 180.25318 * 21 20 19 24 24 C 1.38249 * 120.15142 * 0.50953 * 20 19 4 25 25 C 1.50691 * 119.93106 * 179.76954 * 24 20 19 26 26 O 1.42896 * 109.47337 * 74.97237 * 25 24 20 27 27 Si 1.86297 * 109.47386 * 194.97648 * 25 24 20 28 28 C 1.38251 * 120.14346 * 359.74148 * 24 20 19 29 29 H 1.09002 * 109.46996 * 180.02562 * 1 2 3 30 30 H 1.09004 * 109.47574 * 300.00540 * 1 2 3 31 31 H 1.09004 * 109.47164 * 60.00276 * 1 2 3 32 32 H 1.09002 * 109.47196 * 59.99994 * 6 5 4 33 33 H 1.09001 * 109.47404 * 299.99808 * 6 5 4 34 34 H 0.97000 * 119.99708 * 359.97438 * 9 7 6 35 35 H 1.09002 * 109.47391 * 59.99686 * 10 9 7 36 36 H 1.09001 * 109.46813 * 299.99742 * 10 9 7 37 37 H 1.08996 * 113.61633 * 203.66284 * 13 11 10 38 38 H 1.09000 * 113.60934 * 334.56823 * 13 11 10 39 39 H 1.09004 * 109.46694 * 207.50409 * 16 14 13 40 40 H 1.08998 * 109.47344 * 327.50408 * 16 14 13 41 41 H 0.96703 * 113.99634 * 179.97438 * 17 16 14 42 42 H 1.08996 * 113.61289 * 220.02129 * 18 14 13 43 43 H 1.09000 * 113.69453 * 89.12902 * 18 14 13 44 44 H 1.07997 * 120.00241 * 179.72119 * 19 4 3 45 45 H 1.09007 * 109.46872 * 314.97287 * 25 24 20 46 46 H 0.96702 * 114.00382 * 60.00450 * 26 25 24 47 47 H 1.48501 * 110.00303 * 58.67589 * 27 25 24 48 48 H 1.48499 * 110.00185 * 179.97438 * 27 25 24 49 49 H 1.07994 * 119.99862 * 180.02562 * 28 24 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0464 1.2117 0.0000 4 6 3.4359 1.2863 -0.0005 5 8 4.1795 0.1476 0.0000 6 6 5.6003 0.3007 0.0000 7 6 6.2519 -1.0582 0.0012 8 8 5.5670 -2.0591 0.0016 9 7 7.5957 -1.1612 0.0019 10 6 8.2291 -2.4822 0.0026 11 6 9.7503 -2.3183 0.0039 12 9 10.1942 -1.3592 -0.9127 13 6 10.3507 -2.1512 1.4098 14 6 10.4626 -3.6870 1.4560 15 1 9.5743 -4.1791 1.8520 16 6 11.7566 -4.1881 2.1003 17 8 11.5740 -4.2965 3.5136 18 6 10.5134 -3.6508 -0.0806 19 6 4.0603 2.5233 0.0042 20 6 3.3029 3.6798 -0.0011 21 7 3.9715 5.0003 -0.0017 22 8 5.1876 5.0671 -0.0021 23 8 3.3055 6.0202 -0.0017 24 6 1.9223 3.6058 -0.0006 25 6 1.1016 4.8696 -0.0012 26 8 1.1346 5.4584 -1.3028 27 14 -0.6595 4.4666 0.4536 28 6 1.2931 2.3748 -0.0001 29 1 -0.3633 -1.0277 0.0005 30 1 -0.3634 0.5139 0.8899 31 1 -0.3634 0.5138 -0.8900 32 1 5.9065 0.8509 0.8897 33 1 5.9066 0.8501 -0.8903 34 1 8.1434 -0.3606 0.0012 35 1 7.9233 -3.0322 -0.8874 36 1 7.9224 -3.0317 0.8926 37 1 11.3148 -1.6428 1.4152 38 1 9.6505 -1.7410 2.1375 39 1 12.0114 -5.1657 1.6909 40 1 12.5628 -3.4851 1.8909 41 1 12.3561 -4.6099 3.9882 42 1 9.9447 -4.4503 -0.5552 43 1 11.5215 -3.5518 -0.4833 44 1 5.1385 2.5840 0.0084 45 1 1.5132 5.5704 0.7252 46 1 0.7827 4.8894 -2.0010 47 1 -0.7043 3.8245 1.7918 48 1 -1.4792 5.7049 0.4571 49 1 0.2146 2.3197 -0.0001 There are 74 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 74 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16500644_4549636.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:03:45 Heat of formation + Delta-G solvation = -170.294469 kcal Electronic energy + Delta-G solvation = -38199.736215 eV Core-core repulsion = 32628.104655 eV Total energy + Delta-G solvation = -5571.631559 eV No. of doubly occupied orbitals = 74 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 401.150 amu Computer time = 1.72 seconds Orbital eigenvalues (eV) -48.77936 -43.41627 -42.13466 -41.12084 -40.15160 -39.55976 -39.19477 -37.75850 -37.26535 -37.13384 -35.70437 -32.70061 -32.60702 -30.99763 -29.33966 -28.73533 -27.92852 -27.13209 -26.79900 -25.72285 -23.87870 -23.21723 -22.86183 -21.87528 -20.79094 -20.39052 -19.84553 -19.51699 -18.80075 -18.69643 -18.54830 -18.26999 -17.85731 -17.76680 -17.61689 -17.29462 -16.97653 -16.74812 -16.66369 -16.40912 -16.12620 -16.07900 -15.75959 -15.66741 -15.45403 -15.00551 -14.89485 -14.73092 -14.44387 -14.38446 -13.96874 -13.91975 -13.80138 -13.50145 -13.41054 -13.03854 -12.82928 -12.68036 -12.51894 -12.45195 -12.37862 -12.33999 -12.28809 -12.21528 -12.14702 -11.79431 -11.57341 -11.38252 -11.18394 -10.84762 -10.54227 -10.47178 -10.40648 -9.50944 -5.13747 -1.38058 -0.45057 0.14725 0.29164 1.12172 1.14799 1.29066 1.57222 1.88010 1.88812 1.93713 2.22468 2.96707 2.97896 3.06962 3.13731 3.21581 3.23496 3.26259 3.42125 3.45070 3.50604 3.55276 3.84174 3.87192 3.91050 3.92141 4.04174 4.10322 4.21785 4.24128 4.33055 4.35237 4.39025 4.41483 4.49391 4.54024 4.57812 4.64963 4.66284 4.71218 4.72068 4.81931 4.89032 4.96239 5.12567 5.23584 5.31048 5.54642 6.03808 6.21592 6.45048 6.71150 6.86264 6.91785 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.005 4.005 2 O -0.307 6.307 3 C 0.173 3.827 4 C 0.100 3.900 5 O -0.289 6.289 6 C 0.028 3.972 7 C 0.520 3.480 8 O -0.560 6.560 9 N -0.712 5.712 10 C 0.121 3.879 11 C 0.080 3.920 12 F -0.205 7.205 13 C -0.143 4.143 14 C -0.111 4.111 15 H 0.099 0.901 16 C 0.083 3.917 17 O -0.597 6.597 18 C -0.135 4.135 19 C -0.111 4.111 20 C -0.046 4.046 21 N 0.035 4.965 22 O -0.189 6.189 23 O -0.163 6.163 24 C -0.039 4.039 25 C -0.092 4.092 26 O -0.536 6.536 27 Si 0.788 3.212 28 C -0.162 4.162 29 H 0.121 0.879 30 H 0.080 0.920 31 H 0.094 0.906 32 H 0.128 0.872 33 H 0.128 0.872 34 H 0.420 0.580 35 H 0.081 0.919 36 H 0.092 0.908 37 H 0.103 0.897 38 H 0.082 0.918 39 H 0.060 0.940 40 H 0.059 0.941 41 H 0.397 0.603 42 H 0.097 0.903 43 H 0.111 0.889 44 H 0.181 0.819 45 H 0.115 0.885 46 H 0.393 0.607 47 H -0.271 1.271 48 H -0.290 1.290 49 H 0.195 0.805 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.388 -6.015 -0.767 6.076 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.098 4.098 2 O -0.218 6.218 3 C 0.124 3.876 4 C 0.053 3.947 5 O -0.201 6.201 6 C -0.050 4.050 7 C 0.306 3.694 8 O -0.438 6.438 9 N -0.367 5.367 10 C -0.003 4.003 11 C 0.062 3.938 12 F -0.185 7.185 13 C -0.181 4.181 14 C -0.129 4.129 15 H 0.117 0.883 16 C 0.006 3.994 17 O -0.406 6.406 18 C -0.173 4.173 19 C -0.130 4.130 20 C -0.131 4.131 21 N 0.548 4.452 22 O -0.399 6.399 23 O -0.378 6.378 24 C -0.041 4.041 25 C -0.200 4.200 26 O -0.343 6.343 27 Si 0.690 3.310 28 C -0.181 4.181 29 H 0.140 0.860 30 H 0.098 0.902 31 H 0.112 0.888 32 H 0.146 0.854 33 H 0.146 0.854 34 H 0.257 0.743 35 H 0.099 0.901 36 H 0.111 0.889 37 H 0.121 0.879 38 H 0.101 0.899 39 H 0.078 0.922 40 H 0.077 0.923 41 H 0.247 0.753 42 H 0.115 0.885 43 H 0.129 0.871 44 H 0.199 0.801 45 H 0.132 0.868 46 H 0.242 0.758 47 H -0.197 1.197 48 H -0.218 1.218 49 H 0.212 0.788 Dipole moment (debyes) X Y Z Total from point charges -2.098 -6.920 -0.066 7.231 hybrid contribution 1.947 1.205 0.295 2.309 sum -0.151 -5.715 0.229 5.722 Atomic orbital electron populations 1.23822 0.74636 1.07107 1.04219 1.86335 1.24903 1.24439 1.86151 1.18661 0.89062 0.86441 0.93473 1.17963 0.88863 0.85026 1.02896 1.86293 1.18228 1.26851 1.88773 1.22861 0.78969 0.95804 1.07330 1.20251 0.82518 0.90649 0.75971 1.90787 1.63703 1.39639 1.49669 1.45533 1.05622 1.10296 1.75203 1.21657 0.88970 0.85219 1.04429 1.22600 0.92937 0.89143 0.89140 1.92853 1.90319 1.66193 1.69146 1.23775 1.02790 0.97219 0.94275 1.22427 0.99546 0.95887 0.95049 0.88265 1.22201 0.96097 1.00374 0.80746 1.86436 1.43642 1.90542 1.19998 1.23597 1.02420 0.95515 0.95755 1.20899 1.02960 0.88251 1.00938 1.20557 0.92791 0.81867 1.17839 1.43730 1.00828 1.03460 0.97159 1.94508 0.96531 1.94136 1.54732 1.94573 1.64389 1.25427 1.53384 1.20238 0.90999 0.97730 0.95172 1.25788 1.10696 0.92746 0.90797 1.86669 1.87120 1.44590 1.15943 0.94384 0.71656 0.82168 0.82772 1.21092 1.01804 0.88031 1.07148 0.86046 0.90156 0.88792 0.85436 0.85433 0.74299 0.90124 0.88947 0.87900 0.89905 0.92162 0.92305 0.75273 0.88473 0.87053 0.80147 0.86823 0.75786 1.19719 1.21766 0.78844 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.00 0.05 9.81 113.37 1.11 1.16 16 2 O -0.31 0.12 10.28 -79.65 -0.82 -0.69 16 3 C 0.17 -0.17 6.70 22.57 0.15 -0.02 16 4 C 0.10 0.10 6.70 22.57 0.15 0.25 16 5 O -0.29 -1.07 9.45 -67.07 -0.63 -1.70 16 6 C 0.03 -0.09 5.22 71.24 0.37 0.28 16 7 C 0.52 1.21 7.91 87.66 0.69 1.91 16 8 O -0.56 -7.02 16.50 16.01 0.26 -6.76 16 9 N -0.71 1.95 5.45 -463.05 -2.53 -0.58 16 10 C 0.12 -0.25 5.26 86.38 0.45 0.21 16 11 C 0.08 -0.31 1.88 -10.27 -0.02 -0.33 16 12 F -0.20 0.03 16.67 44.97 0.75 0.78 16 13 C -0.14 0.63 7.09 31.21 0.22 0.85 16 14 C -0.11 0.48 3.67 -10.17 -0.04 0.44 16 15 H 0.10 -0.27 7.70 -2.39 -0.02 -0.29 16 16 C 0.08 -0.39 6.89 71.98 0.50 0.11 16 17 O -0.60 0.58 13.66 -148.98 -2.04 -1.46 16 18 C -0.13 0.81 7.12 31.12 0.22 1.03 16 19 C -0.11 -0.02 8.54 22.35 0.19 0.17 16 20 C -0.05 -0.18 6.85 36.38 0.25 0.07 16 21 N 0.04 0.36 4.45 -46.46 -0.21 0.16 16 22 O -0.19 -2.19 18.44 18.89 0.35 -1.84 16 23 O -0.16 -2.18 14.62 25.10 0.37 -1.81 16 24 C -0.04 0.01 5.26 -19.86 -0.10 -0.09 16 25 C -0.09 -0.03 1.74 71.23 0.12 0.10 16 26 O -0.54 -0.76 11.80 -129.63 -1.53 -2.29 16 27 Si 0.79 -4.14 29.91 68.60 2.05 -2.09 16 28 C -0.16 0.83 7.65 22.35 0.17 1.01 16 29 H 0.12 -1.41 8.14 -2.39 -0.02 -1.43 16 30 H 0.08 -1.06 7.66 -2.38 -0.02 -1.08 16 31 H 0.09 -1.44 7.66 -2.39 -0.02 -1.45 16 32 H 0.13 -1.14 7.65 -2.39 -0.02 -1.16 16 33 H 0.13 -1.11 7.67 -2.39 -0.02 -1.13 16 34 H 0.42 -3.15 8.08 -92.71 -0.75 -3.90 16 35 H 0.08 -0.04 8.14 -2.39 -0.02 -0.06 16 36 H 0.09 -0.13 7.37 -2.39 -0.02 -0.15 16 37 H 0.10 -0.50 7.90 -2.39 -0.02 -0.52 16 38 H 0.08 -0.32 8.10 -2.39 -0.02 -0.34 16 39 H 0.06 -0.39 8.14 -2.39 -0.02 -0.41 16 40 H 0.06 -0.39 7.85 -2.39 -0.02 -0.40 16 41 H 0.40 -3.57 9.12 -74.05 -0.68 -4.25 16 42 H 0.10 -0.70 8.10 -2.39 -0.02 -0.72 16 43 H 0.11 -0.80 8.10 -2.39 -0.02 -0.82 16 44 H 0.18 -0.71 5.85 -2.91 -0.02 -0.73 16 45 H 0.11 0.59 6.07 -2.38 -0.01 0.57 16 46 H 0.39 -3.39 8.70 -74.06 -0.64 -4.03 16 47 H -0.27 0.53 7.11 99.48 0.71 1.24 16 48 H -0.29 -0.82 7.11 99.48 0.71 -0.11 16 49 H 0.20 -2.44 3.36 -2.91 -0.01 -2.45 16 Total: 0.00 -34.28 415.10 -0.48 -34.76 By element: Atomic # 1 Polarization: -22.67 SS G_CDS: -0.96 Total: -23.62 kcal Atomic # 6 Polarization: 2.71 SS G_CDS: 4.45 Total: 7.15 kcal Atomic # 7 Polarization: 2.31 SS G_CDS: -2.73 Total: -0.42 kcal Atomic # 8 Polarization: -12.52 SS G_CDS: -4.04 Total: -16.56 kcal Atomic # 9 Polarization: 0.03 SS G_CDS: 0.75 Total: 0.78 kcal Atomic # 14 Polarization: -4.14 SS G_CDS: 2.05 Total: -2.09 kcal Total: -34.28 -0.48 -34.76 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16500644_4549636.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -135.530 kcal (2) G-P(sol) polarization free energy of solvation -34.283 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -169.814 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.481 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.764 kcal (6) G-S(sol) free energy of system = (1) + (5) -170.294 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.72 seconds