Wall clock time and date at job start Sun Mar 7 2021 09:03:50 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42899 * 1 3 3 Si 1.86298 * 109.46748 * 2 1 4 4 C 1.50696 * 109.46950 * 240.00432 * 2 1 3 5 5 C 1.38252 * 119.94647 * 120.01998 * 4 2 1 6 6 C 1.38162 * 120.05904 * 179.71844 * 5 4 2 7 7 C 1.38713 * 119.93793 * 0.53348 * 6 5 4 8 8 O 1.35906 * 120.05283 * 179.74511 * 7 6 5 9 9 C 1.42908 * 117.00029 * 359.72200 * 8 7 6 10 10 C 1.50698 * 109.47052 * 180.02562 * 9 8 7 11 11 O 1.21281 * 119.99976 * 359.97438 * 10 9 8 12 12 N 1.34777 * 119.99827 * 180.02562 * 10 9 8 13 13 C 1.46499 * 120.00034 * 180.02562 * 12 10 9 14 14 C 1.52998 * 109.47132 * 179.97438 * 13 12 10 15 15 F 1.39898 * 112.85098 * 48.79918 * 14 13 12 16 16 C 1.53781 * 113.61406 * 179.97438 * 14 13 12 17 17 C 1.53786 * 87.17350 * 140.02181 * 16 14 13 18 18 H 1.09000 * 113.61138 * 220.06261 * 17 16 14 19 19 C 1.52993 * 113.61559 * 89.15694 * 17 16 14 20 20 O 1.42906 * 109.47197 * 175.00064 * 19 17 16 21 21 C 1.53782 * 113.68747 * 277.53280 * 14 13 12 22 22 C 1.38745 * 119.89516 * 359.46652 * 7 6 5 23 23 N 1.48004 * 120.03331 * 180.23130 * 22 7 6 24 24 O 1.21793 * 120.00034 * 179.97438 * 23 22 7 25 25 O 1.21801 * 119.99929 * 0.02562 * 23 22 7 26 26 C 1.38128 * 119.94233 * 0.25646 * 22 7 6 27 27 H 0.96702 * 114.00481 * 60.00287 * 1 2 3 28 28 H 1.08996 * 109.47301 * 119.99878 * 2 1 3 29 29 H 1.48500 * 110.00154 * 60.00302 * 3 2 1 30 30 H 1.48505 * 110.00018 * 181.32031 * 3 2 1 31 31 H 1.08002 * 119.96991 * 359.97438 * 5 4 2 32 32 H 1.07997 * 120.03198 * 180.25225 * 6 5 4 33 33 H 1.08995 * 109.46567 * 59.99814 * 9 8 7 34 34 H 1.08998 * 109.46939 * 299.99826 * 9 8 7 35 35 H 0.96998 * 120.00059 * 359.97438 * 12 10 9 36 36 H 1.08992 * 109.47451 * 59.99363 * 13 12 10 37 37 H 1.08998 * 109.46738 * 299.99199 * 13 12 10 38 38 H 1.09002 * 113.61445 * 254.61180 * 16 14 13 39 39 H 1.09002 * 113.61408 * 25.42911 * 16 14 13 40 40 H 1.08998 * 109.47144 * 294.99941 * 19 17 16 41 41 H 1.08996 * 109.47235 * 55.00309 * 19 17 16 42 42 H 0.96700 * 114.00004 * 180.02562 * 20 19 17 43 43 H 1.08997 * 113.61668 * 334.55355 * 21 14 13 44 44 H 1.08994 * 113.61387 * 105.46089 * 21 14 13 45 45 H 1.08000 * 119.97458 * 180.02562 * 26 22 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9313 -0.7103 -1.2305 5 6 2.7264 -0.0374 -2.1396 6 6 3.1929 -0.6881 -3.2656 7 6 2.8538 -2.0144 -3.4891 8 8 3.3072 -2.6552 -4.5985 9 6 4.1241 -1.9000 -5.4956 10 6 4.5288 -2.7687 -6.6586 11 8 4.1551 -3.9212 -6.7135 12 7 5.3071 -2.2652 -7.6370 13 6 5.7001 -3.1096 -8.7678 14 6 6.5747 -2.3011 -9.7282 15 9 7.6071 -1.6170 -9.0775 16 6 7.0436 -3.1004 -10.9555 17 6 6.7923 -1.8295 -11.7841 18 1 6.3435 -2.0249 -12.7580 19 6 8.0046 -0.8995 -11.8629 20 8 7.7143 0.1881 -12.7432 21 6 5.7730 -1.4232 -10.7036 22 6 2.0558 -2.6876 -2.5753 23 7 1.6963 -4.1043 -2.8082 24 8 0.9961 -4.6948 -2.0055 25 8 2.1015 -4.6799 -3.8022 26 6 1.5966 -2.0343 -1.4483 27 1 -0.3934 0.4417 -0.7651 28 1 1.7923 -0.5138 0.8899 29 1 1.5614 2.4679 1.2085 30 1 3.5345 1.7704 -0.0322 31 1 2.9864 0.9966 -1.9673 32 1 3.8174 -0.1632 -3.9733 33 1 5.0154 -1.5547 -4.9719 34 1 3.5625 -1.0409 -5.8625 35 1 5.6063 -1.3436 -7.5928 36 1 4.8084 -3.4538 -9.2915 37 1 6.2610 -3.9694 -8.4015 38 1 8.0928 -3.3926 -10.9114 39 1 6.3841 -3.9285 -11.2152 40 1 8.2308 -0.5124 -10.8694 41 1 8.8637 -1.4536 -12.2412 42 1 8.4404 0.8191 -12.8416 43 1 4.7653 -1.7918 -10.8954 44 1 5.7968 -0.3620 -10.4564 45 1 0.9757 -2.5579 -0.7364 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16500644_4549638.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:03:50 Heat of formation + Delta-G solvation = -140.498410 kcal Electronic energy + Delta-G solvation = -33394.950796 eV Core-core repulsion = 28298.831102 eV Total energy + Delta-G solvation = -5096.119694 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 371.135 amu Computer time = 1.36 seconds Orbital eigenvalues (eV) -48.92581 -43.30141 -41.78660 -40.78699 -39.85355 -39.35209 -37.59860 -37.39522 -37.17856 -35.70479 -33.50111 -32.28099 -31.17480 -29.24169 -27.82876 -27.08892 -26.86130 -26.30750 -24.09426 -22.96831 -22.73676 -21.81799 -20.54502 -20.12955 -19.78034 -19.26466 -18.85934 -18.64804 -18.32344 -18.13425 -17.66104 -17.37358 -17.19275 -16.92948 -16.62171 -16.35906 -16.13331 -15.95904 -15.77359 -15.58205 -15.34763 -15.24431 -14.84260 -14.69483 -14.37711 -14.04379 -13.90928 -13.77538 -13.61344 -13.45525 -13.23864 -13.17232 -12.70982 -12.45564 -12.37853 -12.28029 -12.25896 -12.19887 -11.95416 -11.79031 -11.58730 -11.30286 -11.07679 -10.84431 -10.78236 -10.56819 -10.31477 -9.79827 -4.99864 -1.31855 -0.25119 0.15215 0.34722 1.15720 1.26795 1.40097 1.63839 2.01770 2.04813 2.24249 3.00540 3.09600 3.12138 3.15175 3.25647 3.27473 3.38824 3.49307 3.50812 3.60994 3.70643 3.79280 3.89902 3.92125 3.98664 4.22217 4.28378 4.35411 4.38031 4.43383 4.50371 4.56957 4.58255 4.62683 4.67534 4.71005 4.83268 4.87935 4.94042 5.05509 5.06767 5.17283 5.19929 5.30980 5.73211 6.32152 6.41722 6.73410 6.84652 7.04939 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.558 6.558 2 C -0.082 4.082 3 Si 0.799 3.201 4 C -0.150 4.150 5 C -0.005 4.005 6 C -0.189 4.189 7 C 0.193 3.807 8 O -0.291 6.291 9 C 0.025 3.975 10 C 0.510 3.490 11 O -0.562 6.562 12 N -0.709 5.709 13 C 0.114 3.886 14 C 0.084 3.916 15 F -0.192 7.192 16 C -0.138 4.138 17 C -0.119 4.119 18 H 0.091 0.909 19 C 0.083 3.917 20 O -0.594 6.594 21 C -0.139 4.139 22 C -0.104 4.104 23 N 0.034 4.966 24 O -0.203 6.203 25 O -0.172 6.172 26 C -0.003 4.003 27 H 0.398 0.602 28 H 0.110 0.890 29 H -0.306 1.306 30 H -0.264 1.264 31 H 0.188 0.812 32 H 0.206 0.794 33 H 0.141 0.859 34 H 0.148 0.852 35 H 0.420 0.580 36 H 0.094 0.906 37 H 0.071 0.929 38 H 0.088 0.912 39 H 0.123 0.877 40 H 0.058 0.942 41 H 0.054 0.946 42 H 0.397 0.603 43 H 0.114 0.886 44 H 0.085 0.915 45 H 0.150 0.850 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.150 13.638 -4.050 15.130 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.366 6.366 2 C -0.190 4.190 3 Si 0.703 3.297 4 C -0.151 4.151 5 C -0.022 4.022 6 C -0.207 4.207 7 C 0.144 3.856 8 O -0.201 6.201 9 C -0.052 4.052 10 C 0.296 3.704 11 O -0.439 6.439 12 N -0.364 5.364 13 C -0.010 4.010 14 C 0.066 3.934 15 F -0.172 7.172 16 C -0.176 4.176 17 C -0.137 4.137 18 H 0.109 0.891 19 C 0.006 3.994 20 O -0.402 6.402 21 C -0.177 4.177 22 C -0.189 4.189 23 N 0.544 4.456 24 O -0.411 6.411 25 O -0.386 6.386 26 C -0.022 4.022 27 H 0.248 0.752 28 H 0.127 0.873 29 H -0.234 1.234 30 H -0.190 1.190 31 H 0.205 0.795 32 H 0.223 0.777 33 H 0.159 0.841 34 H 0.165 0.835 35 H 0.258 0.742 36 H 0.112 0.888 37 H 0.089 0.911 38 H 0.107 0.893 39 H 0.141 0.859 40 H 0.076 0.924 41 H 0.072 0.928 42 H 0.247 0.753 43 H 0.132 0.868 44 H 0.104 0.896 45 H 0.168 0.832 Dipole moment (debyes) X Y Z Total from point charges 5.036 13.197 -3.122 14.466 hybrid contribution 0.614 -1.010 0.416 1.253 sum 5.650 12.187 -2.706 13.703 Atomic orbital electron populations 1.86529 1.17217 1.82217 1.50640 1.25469 0.85497 1.12026 0.96006 0.93799 0.77928 0.72564 0.85431 1.20459 1.02102 0.92678 0.99886 1.21719 0.89458 1.01171 0.89861 1.21811 1.05957 0.90544 1.02397 1.18957 0.89672 0.92067 0.84951 1.86466 1.63591 1.39711 1.30351 1.23093 0.98168 0.94532 0.89360 1.20467 0.78417 0.87680 0.83814 1.90858 1.55033 1.19988 1.78035 1.45498 1.51840 1.16910 1.22179 1.21824 0.99019 0.93502 0.86670 1.22178 0.86233 0.94103 0.90932 1.92831 1.60507 1.81019 1.82857 1.23604 1.04411 0.97488 0.92131 1.22344 0.96342 0.95272 0.99779 0.89095 1.22116 0.96054 0.87808 0.93446 1.86409 1.46153 1.39262 1.68409 1.23690 0.99413 1.00971 0.93606 1.20855 1.13417 0.81531 1.03093 1.43897 0.98234 1.03998 0.99467 1.94504 1.36079 1.68324 1.42148 1.94675 1.56287 1.69342 1.18336 1.20840 0.94162 0.94768 0.92464 0.75170 0.87285 1.23430 1.19040 0.79492 0.77742 0.84105 0.83473 0.74184 0.88787 0.91102 0.89301 0.85910 0.92375 0.92766 0.75266 0.86795 0.89648 0.83221 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 2.05 12.77 -148.98 -1.90 0.15 16 2 C -0.08 0.51 2.82 71.23 0.20 0.71 16 3 Si 0.80 -8.21 29.78 68.60 2.04 -6.17 16 4 C -0.15 0.87 5.39 -19.85 -0.11 0.77 16 5 C 0.00 0.06 8.66 22.25 0.19 0.25 16 6 C -0.19 2.08 9.04 22.37 0.20 2.28 16 7 C 0.19 0.05 6.67 22.50 0.15 0.20 16 8 O -0.29 -1.19 7.68 -63.47 -0.49 -1.68 16 9 C 0.03 -0.19 5.22 71.24 0.37 0.18 16 10 C 0.51 0.35 7.91 87.66 0.69 1.04 16 11 O -0.56 -7.78 16.50 16.00 0.26 -7.52 16 12 N -0.71 4.04 5.47 -463.08 -2.53 1.51 16 13 C 0.11 -0.44 5.37 86.38 0.46 0.03 16 14 C 0.08 -0.50 1.66 -10.27 -0.02 -0.52 16 15 F -0.19 0.61 15.02 44.97 0.68 1.28 16 16 C -0.14 0.91 7.12 31.12 0.22 1.13 16 17 C -0.12 0.52 4.21 -10.19 -0.04 0.48 16 18 H 0.09 -0.27 8.14 -2.39 -0.02 -0.29 16 19 C 0.08 -0.28 6.66 71.98 0.48 0.20 16 20 O -0.59 0.58 13.66 -148.98 -2.04 -1.46 16 21 C -0.14 0.92 7.08 31.20 0.22 1.14 16 22 C -0.10 -0.70 6.87 36.47 0.25 -0.45 16 23 N 0.03 0.56 4.45 -46.25 -0.21 0.36 16 24 O -0.20 -3.79 18.45 18.90 0.35 -3.44 16 25 O -0.17 -3.68 17.24 25.61 0.44 -3.24 16 26 C 0.00 -0.01 9.12 22.26 0.20 0.20 16 27 H 0.40 -4.94 8.70 -74.06 -0.64 -5.58 16 28 H 0.11 -0.46 7.96 -2.39 -0.02 -0.48 16 29 H -0.31 0.13 7.11 99.48 0.71 0.83 16 30 H -0.26 2.17 7.11 99.48 0.71 2.87 16 31 H 0.19 -3.65 4.87 -2.91 -0.01 -3.67 16 32 H 0.21 -4.29 6.30 -2.91 -0.02 -4.31 16 33 H 0.14 -2.18 7.65 -2.39 -0.02 -2.20 16 34 H 0.15 -2.45 7.67 -2.39 -0.02 -2.46 16 35 H 0.42 -5.09 8.19 -92.71 -0.76 -5.85 16 36 H 0.09 -0.34 7.95 -2.39 -0.02 -0.36 16 37 H 0.07 -0.05 8.14 -2.39 -0.02 -0.07 16 38 H 0.09 -0.56 8.10 -2.39 -0.02 -0.58 16 39 H 0.12 -1.09 8.10 -2.39 -0.02 -1.11 16 40 H 0.06 -0.21 6.32 -2.39 -0.02 -0.23 16 41 H 0.05 -0.24 8.14 -2.39 -0.02 -0.26 16 42 H 0.40 -3.58 9.12 -74.06 -0.68 -4.26 16 43 H 0.11 -0.94 7.97 -2.39 -0.02 -0.96 16 44 H 0.08 -0.52 8.10 -2.39 -0.02 -0.54 16 45 H 0.15 0.58 7.61 -2.91 -0.02 0.56 16 Total: 0.00 -40.67 388.05 -0.85 -41.52 By element: Atomic # 1 Polarization: -28.00 SS G_CDS: -0.94 Total: -28.94 kcal Atomic # 6 Polarization: 4.15 SS G_CDS: 3.48 Total: 7.63 kcal Atomic # 7 Polarization: 4.60 SS G_CDS: -2.74 Total: 1.86 kcal Atomic # 8 Polarization: -13.81 SS G_CDS: -3.37 Total: -17.18 kcal Atomic # 9 Polarization: 0.61 SS G_CDS: 0.68 Total: 1.28 kcal Atomic # 14 Polarization: -8.21 SS G_CDS: 2.04 Total: -6.17 kcal Total: -40.67 -0.85 -41.52 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16500644_4549638.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -98.981 kcal (2) G-P(sol) polarization free energy of solvation -40.666 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -139.647 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.851 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -41.517 kcal (6) G-S(sol) free energy of system = (1) + (5) -140.498 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.36 seconds