Wall clock time and date at job start Sun Mar 7 2021 09:03:55 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42907 * 1 3 3 Si 1.86298 * 109.46940 * 2 1 4 4 C 1.50700 * 109.46720 * 240.00085 * 2 1 3 5 5 C 1.38264 * 119.94517 * 299.99444 * 4 2 1 6 6 C 1.38146 * 120.05611 * 180.02562 * 5 4 2 7 7 C 1.38736 * 119.94338 * 0.02562 * 6 5 4 8 8 O 1.35899 * 120.05305 * 180.02562 * 7 6 5 9 9 C 1.42908 * 116.99727 * 179.97438 * 8 7 6 10 10 F 1.39905 * 109.46763 * 60.00423 * 9 8 7 11 11 F 1.39892 * 109.47324 * 300.00302 * 9 8 7 12 12 C 1.50698 * 109.46887 * 179.97438 * 9 8 7 13 13 O 1.21283 * 120.00472 * 0.02562 * 12 9 8 14 14 N 1.34777 * 119.99538 * 180.02562 * 12 9 8 15 15 C 1.46499 * 119.99665 * 179.72653 * 14 12 9 16 16 C 1.53004 * 109.47198 * 180.27868 * 15 14 12 17 17 F 1.39900 * 112.84832 * 48.80297 * 16 15 14 18 18 C 1.53786 * 113.61436 * 180.02562 * 16 15 14 19 19 C 1.53781 * 87.07707 * 139.98143 * 18 16 15 20 20 H 1.09003 * 113.61260 * 219.92971 * 19 18 16 21 21 C 1.52998 * 113.61355 * 89.11690 * 19 18 16 22 22 O 1.42899 * 109.46955 * 174.99614 * 21 19 18 23 23 C 1.53775 * 113.61161 * 277.49852 * 16 15 14 24 24 C 1.38734 * 119.88685 * 0.27331 * 7 6 5 25 25 C 1.38144 * 119.94149 * 359.47542 * 24 7 6 26 26 H 0.96696 * 113.99992 * 60.00036 * 1 2 3 27 27 H 1.08999 * 109.47076 * 120.00037 * 2 1 3 28 28 H 1.48494 * 109.99962 * 60.00298 * 3 2 1 29 29 H 1.48504 * 109.99657 * 181.32124 * 3 2 1 30 30 H 1.08002 * 119.97086 * 0.02985 * 5 4 2 31 31 H 1.08002 * 120.02856 * 179.97438 * 6 5 4 32 32 H 0.97001 * 120.00485 * 0.02562 * 14 12 9 33 33 H 1.09009 * 109.47454 * 300.27637 * 15 14 12 34 34 H 1.08998 * 109.47492 * 60.27932 * 15 14 12 35 35 H 1.09002 * 113.61232 * 254.52878 * 18 16 15 36 36 H 1.08995 * 113.61289 * 25.34340 * 18 16 15 37 37 H 1.08991 * 109.47205 * 294.99343 * 21 19 18 38 38 H 1.09003 * 109.47637 * 54.99951 * 21 19 18 39 39 H 0.96703 * 114.00124 * 179.97438 * 22 21 19 40 40 H 1.09003 * 113.61837 * 334.56289 * 23 16 15 41 41 H 1.09005 * 113.61447 * 105.47028 * 23 16 15 42 42 H 1.08003 * 120.02498 * 179.72091 * 24 7 6 43 43 H 1.08009 * 119.96662 * 180.22952 * 25 24 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7104 -1.2305 5 6 1.5966 -2.0342 -1.4481 6 6 2.0562 -2.6878 -2.5751 7 6 2.8546 -2.0149 -3.4886 8 8 3.3075 -2.6556 -4.5982 9 6 4.1244 -1.9004 -5.4953 10 9 5.2689 -1.4578 -4.8234 11 9 3.4039 -0.7974 -5.9658 12 6 4.5296 -2.7694 -6.6579 13 8 4.1555 -3.9218 -6.7132 14 7 5.3079 -2.2660 -7.6363 15 6 5.7069 -3.1125 -8.7635 16 6 6.5866 -2.3058 -9.7208 17 9 7.6156 -1.6206 -9.0660 18 6 7.0608 -3.1071 -10.9448 19 6 6.8125 -1.8363 -11.7744 20 1 6.3696 -2.0320 -12.7509 21 6 8.0247 -0.9056 -11.8476 22 8 7.7376 0.1818 -12.7291 23 6 5.7883 -1.4311 -10.7018 24 6 3.1941 -0.6885 -3.2648 25 6 2.7277 -0.0379 -2.1389 26 1 -0.3933 0.4417 -0.7650 27 1 1.7924 -0.5138 0.8900 28 1 1.5615 2.4678 1.2085 29 1 3.5346 1.7702 -0.0322 30 1 0.9753 -2.5576 -0.7365 31 1 1.7948 -3.7219 -2.7444 32 1 5.6076 -1.3445 -7.5920 33 1 6.2662 -3.9715 -8.3927 34 1 4.8178 -3.4580 -9.2910 35 1 8.1100 -3.3986 -10.8960 36 1 6.4029 -3.9360 -11.2056 37 1 8.2460 -0.5184 -10.8532 38 1 8.8858 -1.4592 -12.2220 39 1 8.4636 0.8137 -12.8237 40 1 4.7818 -1.8012 -10.8972 41 1 5.8098 -0.3692 -10.4568 42 1 3.8193 -0.1639 -3.9722 43 1 2.9887 0.9958 -1.9661 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16500644_4549640.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:03:55 Heat of formation + Delta-G solvation = -233.428413 kcal Electronic energy + Delta-G solvation = -32799.242977 eV Core-core repulsion = 27591.202020 eV Total energy + Delta-G solvation = -5208.040957 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 362.122 amu Computer time = 1.03 seconds Orbital eigenvalues (eV) -50.82726 -49.11968 -48.80303 -41.38513 -41.06684 -40.03888 -39.22353 -37.38932 -37.22725 -36.06795 -32.43134 -32.02046 -31.03400 -28.86236 -27.34120 -27.00638 -26.07797 -24.43786 -23.18898 -22.69935 -22.31517 -20.68654 -20.34704 -19.98163 -19.62457 -18.65172 -18.49147 -17.76151 -17.57135 -17.26240 -17.21813 -16.90215 -16.63126 -16.30688 -16.23065 -15.98731 -15.79241 -15.69472 -15.49683 -15.40753 -15.30970 -15.27329 -15.04287 -14.96509 -14.42803 -14.36279 -14.28626 -14.15802 -13.95143 -13.67774 -13.58177 -13.43730 -12.97605 -12.69045 -12.35425 -12.12255 -12.01074 -11.88791 -11.79068 -11.55786 -11.47383 -10.94787 -10.71256 -10.49087 -10.15605 -9.51835 -5.07383 0.07368 0.18922 0.45219 0.67376 1.25537 1.59317 1.73509 1.94011 1.98840 2.50098 2.63424 2.76712 2.84479 2.95717 2.98138 3.24991 3.29035 3.41179 3.54393 3.64195 3.66083 3.75080 3.99627 4.10364 4.12376 4.21444 4.23687 4.28169 4.30582 4.38748 4.41179 4.46862 4.50778 4.59194 4.62754 4.71438 4.82623 4.89574 4.94435 5.04270 5.08268 5.37235 5.40646 5.66604 5.88416 6.32510 6.53842 6.55876 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.540 6.540 2 C -0.065 4.065 3 Si 0.686 3.314 4 C -0.142 4.142 5 C -0.056 4.056 6 C -0.126 4.126 7 C 0.106 3.894 8 O -0.286 6.286 9 C 0.433 3.567 10 F -0.174 7.174 11 F -0.173 7.173 12 C 0.517 3.483 13 O -0.467 6.467 14 N -0.702 5.702 15 C 0.112 3.888 16 C 0.075 3.925 17 F -0.182 7.182 18 C -0.139 4.139 19 C -0.110 4.110 20 H 0.098 0.902 21 C 0.084 3.916 22 O -0.573 6.573 23 C -0.148 4.148 24 C -0.186 4.186 25 C -0.078 4.078 26 H 0.380 0.620 27 H 0.116 0.884 28 H -0.253 1.253 29 H -0.257 1.257 30 H 0.140 0.860 31 H 0.141 0.859 32 H 0.414 0.586 33 H 0.092 0.908 34 H 0.101 0.899 35 H 0.090 0.910 36 H 0.112 0.888 37 H 0.058 0.942 38 H 0.051 0.949 39 H 0.384 0.616 40 H 0.106 0.894 41 H 0.088 0.912 42 H 0.136 0.864 43 H 0.134 0.866 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.579 2.152 -4.362 5.114 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.345 6.345 2 C -0.176 4.176 3 Si 0.588 3.412 4 C -0.143 4.143 5 C -0.074 4.074 6 C -0.144 4.144 7 C 0.063 3.937 8 O -0.202 6.202 9 C 0.355 3.645 10 F -0.155 7.155 11 F -0.155 7.155 12 C 0.295 3.705 13 O -0.337 6.337 14 N -0.356 5.356 15 C -0.011 4.011 16 C 0.056 3.944 17 F -0.162 7.162 18 C -0.177 4.177 19 C -0.129 4.129 20 H 0.117 0.883 21 C 0.007 3.993 22 O -0.379 6.379 23 C -0.185 4.185 24 C -0.205 4.205 25 C -0.095 4.095 26 H 0.227 0.773 27 H 0.133 0.867 28 H -0.178 1.178 29 H -0.182 1.182 30 H 0.158 0.842 31 H 0.159 0.841 32 H 0.250 0.750 33 H 0.110 0.890 34 H 0.120 0.880 35 H 0.109 0.891 36 H 0.131 0.869 37 H 0.076 0.924 38 H 0.069 0.931 39 H 0.231 0.769 40 H 0.125 0.875 41 H 0.106 0.894 42 H 0.154 0.846 43 H 0.151 0.849 Dipole moment (debyes) X Y Z Total from point charges 1.313 1.119 -3.507 3.908 hybrid contribution 1.122 0.539 0.347 1.292 sum 2.434 1.658 -3.160 4.319 Atomic orbital electron populations 1.86507 1.16997 1.81686 1.49310 1.25008 0.85301 1.10007 0.97253 0.94753 0.81016 0.78075 0.87328 1.20375 1.00616 0.95509 0.97772 1.20891 0.97166 0.93462 0.95871 1.20540 0.99121 1.01241 0.93526 1.18983 0.96449 0.91779 0.86461 1.86669 1.63436 1.38355 1.31758 1.21740 0.76820 0.79422 0.86469 1.93204 1.50864 1.89875 1.81575 1.93196 1.78191 1.55552 1.88535 1.19275 0.80988 0.87639 0.82568 1.90886 1.51915 1.15631 1.75262 1.45600 1.50761 1.16962 1.22321 1.22074 0.99519 0.93554 0.85965 1.22258 0.86724 0.94316 0.91058 1.92868 1.60174 1.80748 1.82390 1.23568 1.04162 0.97509 0.92485 1.22243 0.96126 0.94665 0.99842 0.88338 1.22066 0.95657 0.87951 0.93670 1.86446 1.45017 1.38491 1.67938 1.23694 0.99233 1.01379 0.94219 1.21475 1.04511 0.93630 1.00861 1.20807 0.96316 0.99358 0.93044 0.77286 0.86708 1.17796 1.18230 0.84212 0.84124 0.75032 0.88971 0.88044 0.89138 0.86937 0.92386 0.93063 0.76897 0.87518 0.89362 0.84613 0.84861 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.02 12.77 -35.23 -0.45 -0.47 16 2 C -0.06 0.02 2.82 36.01 0.10 0.12 16 3 Si 0.69 -0.73 29.78 -169.99 -5.06 -5.79 16 4 C -0.14 -0.05 5.39 -104.60 -0.56 -0.61 16 5 C -0.06 -0.04 9.60 -39.61 -0.38 -0.42 16 6 C -0.13 -0.20 9.99 -39.43 -0.39 -0.59 16 7 C 0.11 0.28 6.48 -39.21 -0.25 0.03 16 8 O -0.29 -1.00 9.60 -39.33 -0.38 -1.38 16 9 C 0.43 0.76 2.05 36.00 0.07 0.83 16 10 F -0.17 -0.25 15.27 2.25 0.03 -0.22 16 11 F -0.17 -0.15 15.31 2.25 0.03 -0.12 16 12 C 0.52 0.84 7.34 -10.99 -0.08 0.76 16 13 O -0.47 -2.16 16.50 -14.35 -0.24 -2.40 16 14 N -0.70 0.86 5.47 -60.29 -0.33 0.53 16 15 C 0.11 -0.27 5.36 -4.04 -0.02 -0.29 16 16 C 0.08 -0.21 1.66 -89.81 -0.15 -0.36 16 17 F -0.18 0.15 15.01 2.25 0.03 0.18 16 18 C -0.14 0.51 7.13 -25.92 -0.18 0.32 16 19 C -0.11 0.25 4.20 -89.83 -0.38 -0.13 16 20 H 0.10 -0.18 8.14 -51.93 -0.42 -0.60 16 21 C 0.08 -0.12 6.66 37.16 0.25 0.12 16 22 O -0.57 0.11 13.66 -35.23 -0.48 -0.37 16 23 C -0.15 0.42 7.07 -25.94 -0.18 0.24 16 24 C -0.19 -0.28 8.26 -39.43 -0.33 -0.61 16 25 C -0.08 -0.02 8.66 -39.61 -0.34 -0.36 16 26 H 0.38 -1.42 8.70 45.56 0.40 -1.02 16 27 H 0.12 0.00 7.96 -51.93 -0.41 -0.42 16 28 H -0.25 -0.55 7.11 56.52 0.40 -0.14 16 29 H -0.26 -0.32 7.11 56.52 0.40 0.08 16 30 H 0.14 -0.07 8.06 -52.49 -0.42 -0.49 16 31 H 0.14 0.06 8.06 -52.49 -0.42 -0.37 16 32 H 0.41 -1.10 8.19 -40.82 -0.33 -1.44 16 33 H 0.09 -0.20 8.14 -51.92 -0.42 -0.62 16 34 H 0.10 -0.33 7.94 -51.93 -0.41 -0.74 16 35 H 0.09 -0.33 8.10 -51.93 -0.42 -0.75 16 36 H 0.11 -0.58 8.10 -51.93 -0.42 -1.00 16 37 H 0.06 -0.08 6.31 -51.93 -0.33 -0.41 16 38 H 0.05 -0.11 8.14 -51.93 -0.42 -0.54 16 39 H 0.38 -1.59 9.12 45.56 0.42 -1.18 16 40 H 0.11 -0.42 7.96 -51.93 -0.41 -0.83 16 41 H 0.09 -0.18 8.10 -51.93 -0.42 -0.60 16 42 H 0.14 0.10 5.10 -52.48 -0.27 -0.17 16 43 H 0.13 -0.23 4.87 -52.48 -0.26 -0.49 16 LS Contribution 371.26 15.07 5.59 5.59 Total: 0.00 -8.85 371.26 -8.26 -17.11 By element: Atomic # 1 Polarization: -7.54 SS G_CDS: -4.19 Total: -11.73 kcal Atomic # 6 Polarization: 1.89 SS G_CDS: -2.83 Total: -0.95 kcal Atomic # 7 Polarization: 0.86 SS G_CDS: -0.33 Total: 0.53 kcal Atomic # 8 Polarization: -3.08 SS G_CDS: -1.55 Total: -4.62 kcal Atomic # 9 Polarization: -0.25 SS G_CDS: 0.10 Total: -0.15 kcal Atomic # 14 Polarization: -0.73 SS G_CDS: -5.06 Total: -5.79 kcal Total LS contribution 5.59 Total: 5.59 kcal Total: -8.85 -8.26 -17.11 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16500644_4549640.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -216.315 kcal (2) G-P(sol) polarization free energy of solvation -8.852 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -225.167 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.261 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.113 kcal (6) G-S(sol) free energy of system = (1) + (5) -233.428 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.03 seconds