Wall clock time and date at job start Sun Mar 7 2021 09:04:20 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42899 * 1 3 3 Si 1.86301 * 109.47339 * 2 1 4 4 C 1.50697 * 109.47465 * 120.00737 * 2 1 3 5 5 C 1.38237 * 119.94346 * 64.99474 * 4 2 1 6 6 C 1.38184 * 120.07588 * 180.02562 * 5 4 2 7 7 C 1.38678 * 119.95109 * 359.97438 * 6 5 4 8 8 O 1.35918 * 120.05818 * 179.97438 * 7 6 5 9 9 C 1.42900 * 117.00194 * 359.97438 * 8 7 6 10 10 C 1.50698 * 109.47305 * 180.02562 * 9 8 7 11 11 O 1.21280 * 119.99790 * 359.97438 * 10 9 8 12 12 N 1.34773 * 119.99980 * 180.02562 * 10 9 8 13 13 C 1.46503 * 120.00036 * 179.97438 * 12 10 9 14 14 C 1.52992 * 109.47166 * 180.02562 * 13 12 10 15 15 F 1.39898 * 112.90917 * 316.24772 * 14 13 12 16 16 C 1.53784 * 113.61673 * 87.50094 * 14 13 12 17 17 C 1.53779 * 87.08045 * 89.11647 * 16 14 13 18 18 H 1.09006 * 113.61307 * 270.88660 * 17 16 14 19 19 C 1.52998 * 113.61561 * 139.98260 * 17 16 14 20 20 O 1.42900 * 109.47401 * 87.49974 * 19 17 16 21 21 C 1.53779 * 87.08402 * 25.43458 * 17 16 14 22 22 C 1.38832 * 119.88343 * 0.25125 * 7 6 5 23 23 Br 1.89098 * 120.03895 * 179.72987 * 22 7 6 24 24 C 1.38196 * 119.92827 * 359.53616 * 22 7 6 25 25 H 0.96707 * 113.99547 * 299.99776 * 1 2 3 26 26 H 1.09007 * 109.46467 * 240.00271 * 2 1 3 27 27 H 1.48500 * 110.00013 * 300.00741 * 3 2 1 28 28 H 1.48498 * 109.99630 * 61.32467 * 3 2 1 29 29 H 1.08008 * 119.96096 * 359.97438 * 5 4 2 30 30 H 1.08000 * 120.02809 * 179.97438 * 6 5 4 31 31 H 1.08998 * 109.46590 * 60.00019 * 9 8 7 32 32 H 1.08995 * 109.46858 * 300.00498 * 9 8 7 33 33 H 0.97004 * 119.99934 * 359.97438 * 12 10 9 34 34 H 1.08996 * 109.47072 * 59.99516 * 13 12 10 35 35 H 1.09007 * 109.46579 * 299.99681 * 13 12 10 36 36 H 1.09002 * 113.61478 * 203.66611 * 16 14 13 37 37 H 1.09004 * 113.61162 * 334.56789 * 16 14 13 38 38 H 1.09007 * 109.47269 * 207.50282 * 19 17 16 39 39 H 1.08998 * 109.47235 * 327.49891 * 19 17 16 40 40 H 0.96697 * 114.00419 * 180.02562 * 20 19 17 41 41 H 1.08997 * 113.61646 * 220.02209 * 21 17 16 42 42 H 1.09000 * 113.61527 * 89.11480 * 21 17 16 43 43 H 1.07997 * 119.97835 * 180.18349 * 24 22 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9314 -0.7105 1.2303 5 6 1.6841 -2.0604 1.3969 6 6 2.1430 -2.7145 2.5243 7 6 2.8530 -2.0160 3.4892 8 8 3.3050 -2.6571 4.5992 9 6 3.0122 -4.0516 4.7074 10 6 3.5873 -4.5874 5.9931 11 8 4.1892 -3.8480 6.7428 12 7 3.4338 -5.8884 6.3095 13 6 3.9934 -6.4095 7.5591 14 6 3.6809 -7.9027 7.6744 15 9 2.3637 -8.2124 7.3191 16 6 4.7288 -8.8051 7.0017 17 6 5.4773 -8.8037 8.3450 18 1 6.1912 -7.9861 8.4462 19 6 6.0725 -10.1634 8.7164 20 8 7.3773 -10.2840 8.1463 21 6 4.1203 -8.5226 9.0114 22 6 3.0963 -0.6594 3.3223 23 35 4.0573 0.2991 4.6389 24 6 2.6388 -0.0110 2.1908 25 1 -0.3933 0.4417 0.7651 26 1 1.7922 -0.5138 -0.8901 27 1 1.5614 2.4679 -1.2084 28 1 1.5880 2.4584 1.2243 29 1 1.1307 -2.6041 0.6455 30 1 1.9490 -3.7690 2.6538 31 1 3.4527 -4.5818 3.8631 32 1 1.9320 -4.1973 4.7044 33 1 2.9527 -6.4799 5.7097 34 1 3.5527 -5.8793 8.4034 35 1 5.0737 -6.2634 7.5621 36 1 4.3437 -9.7844 6.7175 37 1 5.2756 -8.3142 6.1966 38 1 6.1409 -10.2460 9.8012 39 1 5.4329 -10.9575 8.3312 40 1 7.8156 -11.1237 8.3411 41 1 4.1757 -7.8036 9.8287 42 1 3.5688 -9.4247 9.2766 43 1 2.8302 1.0437 2.0587 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16500644_6201210.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:04:20 Heat of formation + Delta-G solvation = -136.104460 kcal Electronic energy + Delta-G solvation = -28898.514146 eV Core-core repulsion = 24293.783420 eV Total energy + Delta-G solvation = -4604.730725 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 404.051 amu Computer time = 0.96 seconds Orbital eigenvalues (eV) -48.84494 -41.72921 -40.83364 -40.12978 -39.14191 -37.43417 -37.31130 -35.63642 -33.50935 -32.24581 -31.14372 -30.21294 -29.25754 -27.30160 -27.00118 -26.26111 -24.05019 -23.01160 -22.49913 -21.74040 -20.47234 -19.63770 -18.76767 -18.41227 -18.35424 -17.74964 -17.57176 -17.30205 -16.91622 -16.77919 -16.49829 -16.27864 -16.04076 -15.85997 -15.74047 -15.60809 -15.07137 -14.93864 -14.78937 -14.51583 -14.35386 -14.08654 -14.00736 -13.84971 -13.49116 -13.39708 -12.97406 -12.53543 -12.50020 -12.33138 -12.28765 -12.27380 -11.81105 -11.71302 -11.69135 -11.52461 -11.06678 -11.03651 -10.99052 -10.66859 -10.35985 -10.02689 -9.33326 -5.00061 -0.06996 0.02992 0.70537 1.21769 1.23316 1.39589 1.55232 1.92252 2.31340 2.33288 2.80039 2.94892 3.05059 3.06369 3.27774 3.29714 3.36858 3.44742 3.64222 3.67648 3.71848 3.78177 3.84216 3.99653 4.07417 4.16500 4.21981 4.26770 4.34810 4.38557 4.39762 4.44308 4.48112 4.53901 4.55846 4.70749 4.73124 4.82053 4.94745 5.08765 5.14033 5.22436 5.36438 5.94291 6.19301 6.33023 6.54262 6.96890 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.529 6.529 2 C -0.067 4.067 3 Si 0.677 3.323 4 C -0.150 4.150 5 C -0.034 4.034 6 C -0.204 4.204 7 C 0.162 3.838 8 O -0.274 6.274 9 C 0.039 3.961 10 C 0.518 3.482 11 O -0.505 6.505 12 N -0.726 5.726 13 C 0.123 3.877 14 C 0.079 3.921 15 F -0.195 7.195 16 C -0.146 4.146 17 C -0.109 4.109 18 H 0.108 0.892 19 C 0.087 3.913 20 O -0.573 6.573 21 C -0.141 4.141 22 C -0.119 4.119 23 Br -0.024 7.024 24 C -0.051 4.051 25 H 0.377 0.623 26 H 0.121 0.879 27 H -0.253 1.253 28 H -0.256 1.256 29 H 0.137 0.863 30 H 0.140 0.860 31 H 0.099 0.901 32 H 0.099 0.901 33 H 0.407 0.593 34 H 0.086 0.914 35 H 0.094 0.906 36 H 0.099 0.901 37 H 0.085 0.915 38 H 0.051 0.949 39 H 0.050 0.950 40 H 0.383 0.617 41 H 0.090 0.910 42 H 0.103 0.897 43 H 0.143 0.857 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.319 -6.220 -0.870 6.289 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.335 6.335 2 C -0.177 4.177 3 Si 0.578 3.422 4 C -0.151 4.151 5 C -0.053 4.053 6 C -0.224 4.224 7 C 0.113 3.887 8 O -0.185 6.185 9 C -0.040 4.040 10 C 0.302 3.698 11 O -0.378 6.378 12 N -0.381 5.381 13 C -0.001 4.001 14 C 0.060 3.940 15 F -0.175 7.175 16 C -0.183 4.183 17 C -0.127 4.127 18 H 0.126 0.874 19 C 0.009 3.991 20 O -0.379 6.379 21 C -0.179 4.179 22 C -0.199 4.199 23 Br 0.062 6.938 24 C -0.070 4.070 25 H 0.225 0.775 26 H 0.139 0.861 27 H -0.178 1.178 28 H -0.181 1.181 29 H 0.155 0.845 30 H 0.157 0.843 31 H 0.117 0.883 32 H 0.116 0.884 33 H 0.242 0.758 34 H 0.105 0.895 35 H 0.112 0.888 36 H 0.117 0.883 37 H 0.104 0.896 38 H 0.070 0.930 39 H 0.068 0.932 40 H 0.230 0.770 41 H 0.108 0.892 42 H 0.122 0.878 43 H 0.160 0.840 Dipole moment (debyes) X Y Z Total from point charges 0.940 -4.094 -0.419 4.221 hybrid contribution -1.677 -1.602 0.102 2.321 sum -0.737 -5.696 -0.316 5.752 Atomic orbital electron populations 1.86609 1.17572 1.79948 1.49407 1.24906 0.84000 1.10823 0.97969 0.95006 0.91774 0.74720 0.80724 1.20184 1.02264 0.95020 0.97646 1.20952 0.94913 0.93397 0.96022 1.21296 1.04166 1.00991 0.95935 1.18635 0.92990 0.90706 0.86345 1.86274 1.72792 1.21434 1.38013 1.22511 1.02054 0.81879 0.97561 1.19918 0.80590 0.82005 0.87241 1.90820 1.39554 1.56678 1.50714 1.45584 1.58951 1.09820 1.23748 1.21642 1.00800 0.90265 0.87404 1.22586 0.78170 0.94556 0.98686 1.92865 1.37868 1.93881 1.92919 1.23741 0.95811 1.00638 0.98143 1.22395 0.95606 0.98741 0.95990 0.87430 1.22105 0.84171 0.95866 0.96979 1.86480 1.30562 1.42900 1.77952 1.23609 0.95894 1.02344 0.96090 1.20989 1.08333 0.92354 0.98253 1.96815 1.72600 1.72733 1.51671 1.20905 0.95175 0.99862 0.91079 0.77527 0.86093 1.17752 1.18091 0.84478 0.84268 0.88297 0.88359 0.75829 0.89541 0.88767 0.88266 0.89631 0.93032 0.93218 0.76968 0.89155 0.87826 0.83982 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.22 12.83 -35.23 -0.45 -0.67 16 2 C -0.07 0.06 2.80 36.00 0.10 0.17 16 3 Si 0.68 -0.69 29.88 -169.99 -5.08 -5.77 16 4 C -0.15 0.07 5.35 -104.60 -0.56 -0.49 16 5 C -0.03 0.03 9.68 -39.60 -0.38 -0.35 16 6 C -0.20 0.19 9.04 -39.44 -0.36 -0.17 16 7 C 0.16 0.24 6.68 -39.20 -0.26 -0.02 16 8 O -0.27 -0.67 9.01 -39.39 -0.35 -1.02 16 9 C 0.04 -0.05 5.22 36.00 0.19 0.14 16 10 C 0.52 0.58 7.91 -10.99 -0.09 0.49 16 11 O -0.50 -2.99 16.50 -14.35 -0.24 -3.22 16 12 N -0.73 1.05 5.45 -60.30 -0.33 0.73 16 13 C 0.12 -0.15 5.27 -4.04 -0.02 -0.17 16 14 C 0.08 -0.16 1.91 -89.81 -0.17 -0.33 16 15 F -0.20 0.02 16.61 2.25 0.04 0.06 16 16 C -0.15 0.34 7.06 -25.92 -0.18 0.15 16 17 C -0.11 0.24 3.66 -89.81 -0.33 -0.09 16 18 H 0.11 -0.17 7.72 -51.93 -0.40 -0.57 16 19 C 0.09 -0.19 6.88 37.16 0.26 0.06 16 20 O -0.57 0.31 13.66 -35.23 -0.48 -0.17 16 21 C -0.14 0.40 7.13 -25.92 -0.18 0.22 16 22 C -0.12 -0.25 6.24 -39.38 -0.25 -0.50 16 23 Br -0.02 -0.08 33.16 -68.01 -2.26 -2.33 16 24 C -0.05 -0.02 8.40 -39.58 -0.33 -0.35 16 25 H 0.38 -0.82 8.70 45.56 0.40 -0.42 16 26 H 0.12 -0.24 7.96 -51.93 -0.41 -0.65 16 27 H -0.25 -0.54 7.11 56.52 0.40 -0.14 16 28 H -0.26 -0.25 7.00 56.52 0.40 0.14 16 29 H 0.14 -0.31 8.06 -52.48 -0.42 -0.73 16 30 H 0.14 -0.52 6.30 -52.49 -0.33 -0.85 16 31 H 0.10 -0.41 7.66 -51.93 -0.40 -0.80 16 32 H 0.10 -0.37 7.66 -51.93 -0.40 -0.77 16 33 H 0.41 -1.52 8.03 -40.82 -0.33 -1.84 16 34 H 0.09 -0.05 8.14 -51.93 -0.42 -0.47 16 35 H 0.09 -0.10 7.39 -51.93 -0.38 -0.48 16 36 H 0.10 -0.24 7.90 -51.93 -0.41 -0.65 16 37 H 0.08 -0.18 8.10 -51.93 -0.42 -0.60 16 38 H 0.05 -0.16 8.14 -51.93 -0.42 -0.58 16 39 H 0.05 -0.15 7.84 -51.93 -0.41 -0.56 16 40 H 0.38 -1.75 9.12 45.56 0.42 -1.33 16 41 H 0.09 -0.31 8.10 -51.93 -0.42 -0.73 16 42 H 0.10 -0.34 8.10 -51.93 -0.42 -0.76 16 43 H 0.14 -0.10 4.84 -52.49 -0.25 -0.35 16 LS Contribution 384.17 15.07 5.79 5.79 Total: 0.00 -10.42 384.17 -10.58 -21.00 By element: Atomic # 1 Polarization: -8.50 SS G_CDS: -4.64 Total: -13.14 kcal Atomic # 6 Polarization: 1.33 SS G_CDS: -2.57 Total: -1.24 kcal Atomic # 7 Polarization: 1.05 SS G_CDS: -0.33 Total: 0.73 kcal Atomic # 8 Polarization: -3.56 SS G_CDS: -1.52 Total: -5.08 kcal Atomic # 9 Polarization: 0.02 SS G_CDS: 0.04 Total: 0.06 kcal Atomic # 14 Polarization: -0.69 SS G_CDS: -5.08 Total: -5.77 kcal Atomic # 35 Polarization: -0.08 SS G_CDS: -2.26 Total: -2.33 kcal Total LS contribution 5.79 Total: 5.79 kcal Total: -10.42 -10.58 -21.00 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16500644_6201210.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -115.109 kcal (2) G-P(sol) polarization free energy of solvation -10.420 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -125.529 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.576 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.996 kcal (6) G-S(sol) free energy of system = (1) + (5) -136.104 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.96 seconds