Wall clock time and date at job start Sun Mar 7 2021 09:04:19 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42899 * 1 3 3 Si 1.86301 * 109.47339 * 2 1 4 4 C 1.50697 * 109.47465 * 120.00737 * 2 1 3 5 5 C 1.38237 * 119.94346 * 64.99474 * 4 2 1 6 6 C 1.38184 * 120.07588 * 180.02562 * 5 4 2 7 7 C 1.38678 * 119.95109 * 359.97438 * 6 5 4 8 8 O 1.35918 * 120.05818 * 179.97438 * 7 6 5 9 9 C 1.42900 * 117.00194 * 359.97438 * 8 7 6 10 10 C 1.50698 * 109.47305 * 180.02562 * 9 8 7 11 11 O 1.21280 * 119.99790 * 359.97438 * 10 9 8 12 12 N 1.34773 * 119.99980 * 180.02562 * 10 9 8 13 13 C 1.46503 * 120.00036 * 179.97438 * 12 10 9 14 14 C 1.52992 * 109.47166 * 180.02562 * 13 12 10 15 15 F 1.39898 * 112.90917 * 316.24772 * 14 13 12 16 16 C 1.53784 * 113.61673 * 87.50094 * 14 13 12 17 17 C 1.53779 * 87.08045 * 89.11647 * 16 14 13 18 18 H 1.09006 * 113.61307 * 270.88660 * 17 16 14 19 19 C 1.52998 * 113.61561 * 139.98260 * 17 16 14 20 20 O 1.42900 * 109.47401 * 87.49974 * 19 17 16 21 21 C 1.53779 * 87.08402 * 25.43458 * 17 16 14 22 22 C 1.38832 * 119.88343 * 0.25125 * 7 6 5 23 23 Br 1.89098 * 120.03895 * 179.72987 * 22 7 6 24 24 C 1.38196 * 119.92827 * 359.53616 * 22 7 6 25 25 H 0.96707 * 113.99547 * 299.99776 * 1 2 3 26 26 H 1.09007 * 109.46467 * 240.00271 * 2 1 3 27 27 H 1.48500 * 110.00013 * 300.00741 * 3 2 1 28 28 H 1.48498 * 109.99630 * 61.32467 * 3 2 1 29 29 H 1.08008 * 119.96096 * 359.97438 * 5 4 2 30 30 H 1.08000 * 120.02809 * 179.97438 * 6 5 4 31 31 H 1.08998 * 109.46590 * 60.00019 * 9 8 7 32 32 H 1.08995 * 109.46858 * 300.00498 * 9 8 7 33 33 H 0.97004 * 119.99934 * 359.97438 * 12 10 9 34 34 H 1.08996 * 109.47072 * 59.99516 * 13 12 10 35 35 H 1.09007 * 109.46579 * 299.99681 * 13 12 10 36 36 H 1.09002 * 113.61478 * 203.66611 * 16 14 13 37 37 H 1.09004 * 113.61162 * 334.56789 * 16 14 13 38 38 H 1.09007 * 109.47269 * 207.50282 * 19 17 16 39 39 H 1.08998 * 109.47235 * 327.49891 * 19 17 16 40 40 H 0.96697 * 114.00419 * 180.02562 * 20 19 17 41 41 H 1.08997 * 113.61646 * 220.02209 * 21 17 16 42 42 H 1.09000 * 113.61527 * 89.11480 * 21 17 16 43 43 H 1.07997 * 119.97835 * 180.18349 * 24 22 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9314 -0.7105 1.2303 5 6 1.6841 -2.0604 1.3969 6 6 2.1430 -2.7145 2.5243 7 6 2.8530 -2.0160 3.4892 8 8 3.3050 -2.6571 4.5992 9 6 3.0122 -4.0516 4.7074 10 6 3.5873 -4.5874 5.9931 11 8 4.1892 -3.8480 6.7428 12 7 3.4338 -5.8884 6.3095 13 6 3.9934 -6.4095 7.5591 14 6 3.6809 -7.9027 7.6744 15 9 2.3637 -8.2124 7.3191 16 6 4.7288 -8.8051 7.0017 17 6 5.4773 -8.8037 8.3450 18 1 6.1912 -7.9861 8.4462 19 6 6.0725 -10.1634 8.7164 20 8 7.3773 -10.2840 8.1463 21 6 4.1203 -8.5226 9.0114 22 6 3.0963 -0.6594 3.3223 23 35 4.0573 0.2991 4.6389 24 6 2.6388 -0.0110 2.1908 25 1 -0.3933 0.4417 0.7651 26 1 1.7922 -0.5138 -0.8901 27 1 1.5614 2.4679 -1.2084 28 1 1.5880 2.4584 1.2243 29 1 1.1307 -2.6041 0.6455 30 1 1.9490 -3.7690 2.6538 31 1 3.4527 -4.5818 3.8631 32 1 1.9320 -4.1973 4.7044 33 1 2.9527 -6.4799 5.7097 34 1 3.5527 -5.8793 8.4034 35 1 5.0737 -6.2634 7.5621 36 1 4.3437 -9.7844 6.7175 37 1 5.2756 -8.3142 6.1966 38 1 6.1409 -10.2460 9.8012 39 1 5.4329 -10.9575 8.3312 40 1 7.8156 -11.1237 8.3411 41 1 4.1757 -7.8036 9.8287 42 1 3.5688 -9.4247 9.2766 43 1 2.8302 1.0437 2.0587 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16500644_6201210.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:04:19 Heat of formation + Delta-G solvation = -138.845940 kcal Electronic energy + Delta-G solvation = -28898.633025 eV Core-core repulsion = 24293.783420 eV Total energy + Delta-G solvation = -4604.849605 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 404.051 amu Computer time = 1.11 seconds Orbital eigenvalues (eV) -48.77310 -41.71437 -40.81785 -40.02100 -39.13588 -37.37918 -37.22105 -35.66918 -33.52396 -32.19830 -31.10147 -30.23346 -29.13698 -27.13102 -26.87419 -26.18393 -24.00359 -22.86739 -22.46728 -21.74462 -20.32162 -19.58662 -18.72130 -18.31872 -18.26138 -17.68660 -17.52872 -17.27441 -16.82913 -16.63526 -16.44758 -16.22035 -15.99761 -15.80945 -15.69436 -15.55886 -14.96495 -14.87927 -14.80355 -14.45726 -14.31485 -14.06488 -13.94117 -13.76771 -13.40227 -13.37508 -12.81929 -12.44864 -12.37011 -12.36007 -12.22553 -12.13792 -11.87754 -11.73932 -11.55486 -11.36435 -11.21260 -11.10319 -10.83858 -10.63631 -10.36797 -10.00972 -9.33901 -4.95432 -0.03974 0.07066 0.62849 1.27835 1.30264 1.36265 1.55768 1.91952 2.38268 2.39277 2.99042 3.08241 3.22621 3.23627 3.41024 3.43233 3.48858 3.51473 3.76959 3.80917 3.90463 4.00563 4.01929 4.07317 4.25119 4.32994 4.34424 4.36354 4.48600 4.51141 4.58518 4.65922 4.66960 4.67122 4.72248 4.78560 4.90544 4.98022 5.02884 5.16046 5.29417 5.32026 5.45304 6.01211 6.29206 6.46967 6.87447 6.99076 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.543 6.543 2 C -0.062 4.062 3 Si 0.737 3.263 4 C -0.148 4.148 5 C -0.032 4.032 6 C -0.195 4.195 7 C 0.149 3.851 8 O -0.303 6.303 9 C 0.035 3.965 10 C 0.515 3.485 11 O -0.563 6.563 12 N -0.711 5.711 13 C 0.121 3.879 14 C 0.082 3.918 15 F -0.204 7.204 16 C -0.141 4.141 17 C -0.112 4.112 18 H 0.098 0.902 19 C 0.084 3.916 20 O -0.597 6.597 21 C -0.136 4.136 22 C -0.140 4.140 23 Br -0.050 7.050 24 C -0.056 4.056 25 H 0.386 0.614 26 H 0.138 0.862 27 H -0.296 1.296 28 H -0.286 1.286 29 H 0.157 0.843 30 H 0.172 0.828 31 H 0.132 0.868 32 H 0.128 0.872 33 H 0.420 0.580 34 H 0.077 0.923 35 H 0.090 0.910 36 H 0.104 0.896 37 H 0.083 0.917 38 H 0.059 0.941 39 H 0.060 0.940 40 H 0.397 0.603 41 H 0.094 0.906 42 H 0.112 0.888 43 H 0.146 0.854 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.571 -8.283 -1.927 8.524 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.351 6.351 2 C -0.173 4.173 3 Si 0.644 3.356 4 C -0.149 4.149 5 C -0.050 4.050 6 C -0.214 4.214 7 C 0.101 3.899 8 O -0.216 6.216 9 C -0.043 4.043 10 C 0.302 3.698 11 O -0.440 6.440 12 N -0.367 5.367 13 C -0.003 4.003 14 C 0.063 3.937 15 F -0.184 7.184 16 C -0.179 4.179 17 C -0.130 4.130 18 H 0.116 0.884 19 C 0.006 3.994 20 O -0.406 6.406 21 C -0.174 4.174 22 C -0.220 4.220 23 Br 0.035 6.965 24 C -0.076 4.076 25 H 0.236 0.764 26 H 0.155 0.845 27 H -0.224 1.224 28 H -0.213 1.213 29 H 0.175 0.825 30 H 0.189 0.811 31 H 0.150 0.850 32 H 0.146 0.854 33 H 0.258 0.742 34 H 0.095 0.905 35 H 0.108 0.892 36 H 0.122 0.878 37 H 0.102 0.898 38 H 0.077 0.923 39 H 0.078 0.922 40 H 0.247 0.753 41 H 0.113 0.887 42 H 0.130 0.870 43 H 0.163 0.837 Dipole moment (debyes) X Y Z Total from point charges 0.043 -6.217 -1.483 6.391 hybrid contribution -1.440 -0.982 0.412 1.791 sum -1.397 -7.199 -1.070 7.411 Atomic orbital electron populations 1.86584 1.18156 1.80146 1.50249 1.24914 0.83478 1.10396 0.98489 0.94281 0.90934 0.73740 0.76680 1.20222 1.01900 0.95462 0.97327 1.21228 0.94367 0.93115 0.96322 1.21610 1.02654 1.02349 0.94829 1.18808 0.93666 0.90574 0.86805 1.86234 1.73398 1.23243 1.38699 1.22784 1.03853 0.80604 0.97014 1.20457 0.79658 0.82125 0.87597 1.90796 1.42371 1.58163 1.52707 1.45510 1.58111 1.09361 1.23677 1.21625 1.00554 0.90818 0.87293 1.22568 0.77693 0.93907 0.99495 1.92847 1.38600 1.93897 1.93065 1.23722 0.95442 1.00671 0.98026 1.22379 0.95689 0.98684 0.96266 0.88420 1.22196 0.83765 0.95962 0.97452 1.86434 1.31431 1.44333 1.78402 1.23614 0.95386 1.02679 0.95753 1.21129 1.09435 0.92998 0.98402 1.96771 1.73359 1.73353 1.52976 1.20964 0.95475 1.00142 0.90973 0.76439 0.84470 1.22396 1.21322 0.82530 0.81079 0.85017 0.85428 0.74247 0.90466 0.89168 0.87757 0.89840 0.92283 0.92186 0.75269 0.88701 0.86996 0.83717 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.13 12.83 -148.98 -1.91 -1.78 16 2 C -0.06 0.19 2.80 71.24 0.20 0.39 16 3 Si 0.74 -1.13 29.88 68.60 2.05 0.92 16 4 C -0.15 0.30 5.35 -19.85 -0.11 0.20 16 5 C -0.03 0.13 9.68 22.26 0.22 0.35 16 6 C -0.20 0.81 9.04 22.36 0.20 1.01 16 7 C 0.15 0.37 6.68 22.52 0.15 0.52 16 8 O -0.30 -1.50 9.01 -73.59 -0.66 -2.16 16 9 C 0.04 -0.14 5.22 71.24 0.37 0.24 16 10 C 0.52 1.30 7.91 87.66 0.69 1.99 16 11 O -0.56 -7.71 16.50 16.01 0.26 -7.45 16 12 N -0.71 2.19 5.45 -463.07 -2.52 -0.33 16 13 C 0.12 -0.22 5.27 86.38 0.45 0.24 16 14 C 0.08 -0.34 1.91 -10.27 -0.02 -0.36 16 15 F -0.20 0.20 16.61 44.97 0.75 0.95 16 16 C -0.14 0.70 7.06 31.12 0.22 0.92 16 17 C -0.11 0.49 3.66 -10.27 -0.04 0.45 16 18 H 0.10 -0.23 7.72 -2.38 -0.02 -0.25 16 19 C 0.08 -0.40 6.88 71.98 0.50 0.09 16 20 O -0.60 0.69 13.66 -148.98 -2.03 -1.34 16 21 C -0.14 0.81 7.13 31.12 0.22 1.03 16 22 C -0.14 -0.67 6.24 22.40 0.14 -0.53 16 23 Br -0.05 -0.42 33.16 -20.37 -0.68 -1.09 16 24 C -0.06 -0.06 8.40 22.27 0.19 0.13 16 25 H 0.39 -1.91 8.70 -74.05 -0.64 -2.55 16 26 H 0.14 -0.82 7.96 -2.38 -0.02 -0.84 16 27 H -0.30 -1.70 7.11 99.48 0.71 -0.99 16 28 H -0.29 -0.95 7.00 99.48 0.70 -0.25 16 29 H 0.16 -1.23 8.06 -2.91 -0.02 -1.26 16 30 H 0.17 -1.93 6.30 -2.91 -0.02 -1.95 16 31 H 0.13 -1.42 7.66 -2.39 -0.02 -1.44 16 32 H 0.13 -1.28 7.66 -2.39 -0.02 -1.30 16 33 H 0.42 -3.62 8.03 -92.70 -0.74 -4.36 16 34 H 0.08 0.02 8.14 -2.39 -0.02 0.00 16 35 H 0.09 -0.07 7.39 -2.38 -0.02 -0.09 16 36 H 0.10 -0.60 7.90 -2.39 -0.02 -0.62 16 37 H 0.08 -0.37 8.10 -2.39 -0.02 -0.39 16 38 H 0.06 -0.39 8.14 -2.38 -0.02 -0.40 16 39 H 0.06 -0.42 7.84 -2.39 -0.02 -0.44 16 40 H 0.40 -3.67 9.12 -74.06 -0.68 -4.34 16 41 H 0.09 -0.64 8.10 -2.39 -0.02 -0.66 16 42 H 0.11 -0.82 8.10 -2.39 -0.02 -0.84 16 43 H 0.15 -0.08 4.84 -2.91 -0.01 -0.09 16 Total: 0.00 -26.38 384.17 -2.30 -28.69 By element: Atomic # 1 Polarization: -22.13 SS G_CDS: -0.94 Total: -23.07 kcal Atomic # 6 Polarization: 3.28 SS G_CDS: 3.39 Total: 6.67 kcal Atomic # 7 Polarization: 2.19 SS G_CDS: -2.52 Total: -0.33 kcal Atomic # 8 Polarization: -8.38 SS G_CDS: -4.35 Total: -12.73 kcal Atomic # 9 Polarization: 0.20 SS G_CDS: 0.75 Total: 0.95 kcal Atomic # 14 Polarization: -1.13 SS G_CDS: 2.05 Total: 0.92 kcal Atomic # 35 Polarization: -0.42 SS G_CDS: -0.68 Total: -1.09 kcal Total: -26.38 -2.30 -28.69 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16500644_6201210.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -110.159 kcal (2) G-P(sol) polarization free energy of solvation -26.384 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -136.543 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.303 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -28.687 kcal (6) G-S(sol) free energy of system = (1) + (5) -138.846 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.12 seconds