Wall clock time and date at job start Sun Mar 7 2021 09:04:22 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46895 * 1 3 3 C 1.46902 * 111.00200 * 2 1 4 4 C 1.50695 * 109.47233 * 293.95794 * 3 2 1 5 5 O 1.21288 * 119.99807 * 359.97438 * 4 3 2 6 6 N 1.34776 * 120.00149 * 180.02562 * 4 3 2 7 7 C 1.46504 * 120.00069 * 180.02562 * 6 4 3 8 8 C 1.52998 * 109.47013 * 179.97438 * 7 6 4 9 9 F 1.39895 * 112.91159 * 48.74505 * 8 7 6 10 10 C 1.53784 * 113.61395 * 179.97438 * 8 7 6 11 11 C 1.53787 * 87.07923 * 89.11282 * 10 8 7 12 12 H 1.09000 * 113.61529 * 270.88430 * 11 10 8 13 13 C 1.53000 * 113.60890 * 139.98364 * 11 10 8 14 14 O 1.42904 * 109.46797 * 175.00157 * 13 11 10 15 15 C 1.53779 * 113.61251 * 277.49226 * 8 7 6 16 16 C 1.39675 * 111.00463 * 123.95831 * 2 1 3 17 17 C 1.38890 * 120.07565 * 115.76338 * 16 2 1 18 18 C 1.50699 * 120.03818 * 0.02562 * 17 16 2 19 19 O 1.42900 * 109.46775 * 75.00014 * 18 17 16 20 20 Si 1.86300 * 109.47014 * 194.99673 * 18 17 16 21 21 C 1.38132 * 119.92342 * 179.79295 * 17 16 2 22 22 C 1.38269 * 120.07098 * 0.48616 * 21 17 16 23 23 C 1.50701 * 119.92134 * 179.76633 * 22 21 17 24 24 F 1.39904 * 109.47101 * 179.97438 * 23 22 21 25 25 F 1.39897 * 109.47239 * 299.97701 * 23 22 21 26 26 F 1.39899 * 109.47056 * 59.97802 * 23 22 21 27 27 C 1.38303 * 120.15418 * 359.74619 * 22 21 17 28 28 C 1.38088 * 120.07248 * 0.02562 * 27 22 21 29 29 H 1.08993 * 109.47488 * 59.99407 * 1 2 3 30 30 H 1.08994 * 109.47569 * 180.02562 * 1 2 3 31 31 H 1.09009 * 109.46474 * 299.99895 * 1 2 3 32 32 H 1.08999 * 109.46949 * 173.95852 * 3 2 1 33 33 H 1.08999 * 109.47047 * 53.96147 * 3 2 1 34 34 H 0.96999 * 120.00298 * 359.97438 * 6 4 3 35 35 H 1.09004 * 109.47328 * 59.99245 * 7 6 4 36 36 H 1.09004 * 109.46557 * 299.99403 * 7 6 4 37 37 H 1.09004 * 113.61451 * 334.56768 * 10 8 7 38 38 H 1.08994 * 113.61477 * 203.66069 * 10 8 7 39 39 H 1.09003 * 109.47303 * 294.99508 * 13 11 10 40 40 H 1.08993 * 109.47406 * 54.99787 * 13 11 10 41 41 H 0.96703 * 114.00131 * 179.97438 * 14 13 11 42 42 H 1.09006 * 113.61307 * 156.33907 * 15 8 7 43 43 H 1.08999 * 113.69146 * 25.44393 * 15 8 7 44 44 H 1.08997 * 109.46805 * 315.00026 * 18 17 16 45 45 H 0.96693 * 114.00414 * 60.00350 * 19 18 17 46 46 H 1.48498 * 109.99868 * 179.97438 * 20 18 17 47 47 H 1.48501 * 110.00152 * 301.32136 * 20 18 17 48 48 H 1.07996 * 119.96616 * 180.23002 * 21 17 16 49 49 H 1.07998 * 119.96625 * 179.97438 * 27 22 21 50 50 H 1.08004 * 120.03736 * 179.97438 * 28 27 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4689 0.0000 0.0000 3 6 1.9954 1.3714 0.0000 4 6 1.6369 2.0472 -1.2984 5 8 1.0053 1.4454 -2.1410 6 7 2.0189 3.3199 -1.5236 7 6 1.6698 3.9770 -2.7856 8 6 2.2183 5.4053 -2.7857 9 9 3.5622 5.4726 -2.4031 10 6 1.9050 6.1855 -4.0733 11 6 0.5994 6.6298 -3.3929 12 1 -0.2339 5.9470 -3.5588 13 6 0.2347 8.0911 -3.6621 14 8 -1.0432 8.3763 -3.0895 15 6 1.3172 6.4111 -2.0500 16 6 1.9696 -0.7284 1.0815 17 6 2.7068 -1.8845 0.8606 18 6 2.9683 -2.3550 -0.5471 19 8 3.9664 -1.5275 -1.1480 20 14 3.5639 -4.1198 -0.5114 21 6 3.2041 -2.6001 1.9323 22 6 2.9601 -2.1720 3.2243 23 6 3.4998 -2.9581 4.3912 24 9 3.1269 -2.3339 5.5864 25 9 2.9782 -4.2559 4.3604 26 9 4.8953 -3.0144 4.3102 27 6 2.2223 -1.0238 3.4480 28 6 1.7263 -0.3011 2.3810 29 1 -0.3634 0.5139 -0.8898 30 1 -0.3634 -1.0276 0.0005 31 1 -0.3632 0.5139 0.8901 32 1 3.0797 1.3443 0.1082 33 1 1.5612 1.9273 0.8310 34 1 2.5243 3.8011 -0.8499 35 1 0.5854 4.0045 -2.8932 36 1 2.1034 3.4209 -3.6168 37 1 1.7487 5.5475 -4.9433 38 1 2.5973 7.0048 -4.2668 39 1 0.9864 8.7416 -3.2149 40 1 0.1978 8.2643 -4.7375 41 1 -1.3389 9.2875 -3.2216 42 1 1.8490 7.2922 -1.6906 43 1 0.6861 5.9567 -1.2862 44 1 2.0478 -2.2937 -1.1275 45 1 4.8142 -1.5332 -0.6832 46 1 3.8248 -4.5958 -1.8936 47 1 4.8011 -4.2220 0.3036 48 1 3.7805 -3.4972 1.7612 49 1 2.0332 -0.6924 4.4583 50 1 1.1498 0.5952 2.5564 There are 75 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 75 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16500644_6406254.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:04:22 Heat of formation + Delta-G solvation = -236.662235 kcal Electronic energy + Delta-G solvation = -39616.268521 eV Core-core repulsion = 33725.276783 eV Total energy + Delta-G solvation = -5890.991738 eV No. of doubly occupied orbitals = 75 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 407.155 amu Computer time = 1.62 seconds Orbital eigenvalues (eV) -51.21357 -48.76370 -48.73803 -48.67843 -41.73674 -40.75363 -39.97302 -37.88410 -37.65334 -37.19111 -35.52128 -33.02515 -32.16557 -30.70299 -29.05453 -27.64928 -27.12406 -27.03112 -26.66367 -24.94446 -23.30198 -22.83888 -22.12753 -21.49370 -20.24454 -19.66132 -19.53583 -19.42927 -18.53603 -18.25693 -18.10491 -17.80664 -17.42719 -17.00341 -16.85747 -16.64254 -16.56460 -16.24541 -16.05424 -15.90898 -15.67278 -15.58219 -15.49885 -15.28188 -15.15101 -15.11569 -14.96992 -14.88465 -14.83648 -14.80795 -14.60947 -14.29207 -14.20671 -13.94080 -13.83387 -13.68332 -13.43897 -13.23339 -12.90781 -12.82503 -12.77080 -12.61856 -12.37348 -12.22462 -12.13385 -11.79379 -11.54096 -11.36380 -10.96736 -10.84310 -10.58047 -10.25249 -10.21465 -10.10401 -9.55127 -4.98469 -0.33617 0.01727 1.25367 1.49949 1.55289 1.58806 1.82290 1.90664 2.18921 2.61631 2.73701 2.93393 3.00410 3.11011 3.23287 3.26766 3.34234 3.44234 3.45425 3.61102 3.66366 3.68704 3.89776 4.03096 4.05022 4.09151 4.20958 4.25626 4.29555 4.35064 4.36436 4.46641 4.48487 4.52682 4.56286 4.58106 4.65556 4.65933 4.66573 4.71758 4.89773 4.92067 4.98624 4.99437 5.05631 5.18320 5.29446 5.31775 5.41260 5.64161 6.16900 6.41133 6.55122 6.86676 7.15920 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.024 3.976 2 N -0.500 5.500 3 C 0.047 3.953 4 C 0.518 3.482 5 O -0.556 6.556 6 N -0.722 5.722 7 C 0.124 3.876 8 C 0.079 3.921 9 F -0.207 7.207 10 C -0.137 4.137 11 C -0.109 4.109 12 H 0.099 0.901 13 C 0.084 3.916 14 O -0.597 6.597 15 C -0.140 4.140 16 C 0.143 3.857 17 C -0.096 4.096 18 C -0.056 4.056 19 O -0.533 6.533 20 Si 0.744 3.256 21 C -0.069 4.069 22 C -0.186 4.186 23 C 0.508 3.492 24 F -0.177 7.177 25 F -0.178 7.178 26 F -0.183 7.183 27 C -0.052 4.052 28 C -0.143 4.143 29 H 0.076 0.924 30 H 0.074 0.926 31 H 0.047 0.953 32 H 0.115 0.885 33 H 0.098 0.902 34 H 0.414 0.586 35 H 0.091 0.909 36 H 0.070 0.930 37 H 0.094 0.906 38 H 0.110 0.890 39 H 0.059 0.941 40 H 0.059 0.941 41 H 0.397 0.603 42 H 0.102 0.898 43 H 0.083 0.917 44 H 0.117 0.883 45 H 0.380 0.620 46 H -0.301 1.301 47 H -0.273 1.273 48 H 0.144 0.856 49 H 0.157 0.843 50 H 0.157 0.843 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.073 6.103 1.899 6.720 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.122 4.122 2 N -0.221 5.221 3 C -0.083 4.083 4 C 0.304 3.696 5 O -0.434 6.434 6 N -0.376 5.376 7 C 0.000 4.000 8 C 0.061 3.939 9 F -0.188 7.188 10 C -0.175 4.175 11 C -0.127 4.127 12 H 0.117 0.883 13 C 0.006 3.994 14 O -0.405 6.405 15 C -0.178 4.178 16 C 0.049 3.951 17 C -0.098 4.098 18 C -0.166 4.166 19 O -0.340 6.340 20 Si 0.650 3.350 21 C -0.087 4.087 22 C -0.187 4.187 23 C 0.454 3.546 24 F -0.158 7.158 25 F -0.159 7.159 26 F -0.165 7.165 27 C -0.070 4.070 28 C -0.162 4.162 29 H 0.094 0.906 30 H 0.093 0.907 31 H 0.066 0.934 32 H 0.133 0.867 33 H 0.116 0.884 34 H 0.250 0.750 35 H 0.109 0.891 36 H 0.088 0.912 37 H 0.112 0.888 38 H 0.128 0.872 39 H 0.077 0.923 40 H 0.077 0.923 41 H 0.247 0.753 42 H 0.120 0.880 43 H 0.102 0.898 44 H 0.135 0.865 45 H 0.228 0.772 46 H -0.228 1.228 47 H -0.199 1.199 48 H 0.162 0.838 49 H 0.175 0.825 50 H 0.175 0.825 Dipole moment (debyes) X Y Z Total from point charges -2.135 4.383 0.436 4.895 hybrid contribution 1.195 1.693 0.869 2.247 sum -0.940 6.076 1.306 6.285 Atomic orbital electron populations 1.22611 0.84119 1.03387 1.02105 1.59075 1.09627 1.12795 1.40636 1.22031 1.03143 0.88330 0.94763 1.20758 0.78519 0.81059 0.89235 1.90704 1.40586 1.64522 1.47559 1.45723 1.58226 1.13728 1.19887 1.21524 1.01327 0.89844 0.87320 1.22616 0.76908 0.95053 0.99339 1.92846 1.36164 1.97352 1.92389 1.23603 0.97071 1.00431 0.96410 1.22368 0.96862 0.97284 0.96198 0.88299 1.22190 0.84874 0.94682 0.97616 1.86432 1.36625 1.36488 1.80984 1.23702 0.97328 0.98954 0.97778 1.18852 0.94280 0.93074 0.88941 1.20116 0.98778 0.95381 0.95479 1.24887 0.95940 1.04335 0.91413 1.86688 1.24538 1.67642 1.55169 0.94426 0.85097 0.76688 0.78816 1.20882 0.97710 0.99461 0.90673 1.19922 1.06736 0.99779 0.92277 1.18384 0.75480 0.77946 0.82814 1.93177 1.91191 1.82246 1.49211 1.93231 1.86466 1.39632 1.96608 1.93222 1.30514 1.96381 1.96364 1.21136 0.92952 0.91587 1.01353 1.21914 1.01046 1.01683 0.91591 0.90553 0.90697 0.93445 0.86660 0.88400 0.74974 0.89134 0.91161 0.88754 0.87167 0.92296 0.92255 0.75261 0.87964 0.89788 0.86539 0.77159 1.22847 1.19930 0.83844 0.82539 0.82540 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.01 8.94 127.69 1.14 1.13 16 2 N -0.50 -0.15 3.71 -724.46 -2.69 -2.84 16 3 C 0.05 -0.13 5.03 85.56 0.43 0.30 16 4 C 0.52 1.30 7.55 87.66 0.66 1.97 16 5 O -0.56 -6.13 14.31 -3.05 -0.04 -6.18 16 6 N -0.72 1.10 5.47 -463.04 -2.53 -1.43 16 7 C 0.12 -0.09 5.25 86.38 0.45 0.37 16 8 C 0.08 -0.22 1.83 -10.27 -0.02 -0.24 16 9 F -0.21 -0.30 16.82 44.97 0.76 0.46 16 10 C -0.14 0.68 7.13 31.12 0.22 0.90 16 11 C -0.11 0.43 3.66 -10.25 -0.04 0.40 16 12 H 0.10 -0.23 7.65 -2.39 -0.02 -0.25 16 13 C 0.08 -0.38 6.88 71.98 0.50 0.12 16 14 O -0.60 0.72 13.66 -148.98 -2.04 -1.31 16 15 C -0.14 0.59 7.09 31.14 0.22 0.81 16 16 C 0.14 -0.22 4.65 38.21 0.18 -0.04 16 17 C -0.10 0.05 5.27 -19.73 -0.10 -0.05 16 18 C -0.06 -0.08 2.34 71.24 0.17 0.09 16 19 O -0.53 -2.18 12.88 -148.98 -1.92 -4.10 16 20 Si 0.74 0.05 30.26 68.60 2.08 2.13 16 21 C -0.07 0.07 8.20 22.25 0.18 0.26 16 22 C -0.19 0.18 5.37 -19.84 -0.11 0.07 16 23 C 0.51 0.74 3.31 71.24 0.24 0.98 16 24 F -0.18 -0.29 15.97 44.97 0.72 0.43 16 25 F -0.18 -0.52 17.24 44.97 0.78 0.26 16 26 F -0.18 -0.69 17.23 44.97 0.78 0.09 16 27 C -0.05 0.21 9.42 22.25 0.21 0.42 16 28 C -0.14 0.73 8.70 22.40 0.19 0.92 16 29 H 0.08 0.34 5.88 -2.39 -0.01 0.33 16 30 H 0.07 -0.04 8.12 -2.39 -0.02 -0.06 16 31 H 0.05 -0.21 7.48 -2.38 -0.02 -0.22 16 32 H 0.12 -0.46 8.06 -2.39 -0.02 -0.48 16 33 H 0.10 -0.85 7.47 -2.39 -0.02 -0.86 16 34 H 0.41 -2.36 8.19 -92.71 -0.76 -3.12 16 35 H 0.09 -0.05 7.34 -2.39 -0.02 -0.07 16 36 H 0.07 0.16 8.14 -2.38 -0.02 0.14 16 37 H 0.09 -0.54 8.10 -2.39 -0.02 -0.56 16 38 H 0.11 -0.68 8.10 -2.39 -0.02 -0.70 16 39 H 0.06 -0.38 7.84 -2.39 -0.02 -0.40 16 40 H 0.06 -0.37 8.14 -2.39 -0.02 -0.39 16 41 H 0.40 -3.69 9.12 -74.06 -0.68 -4.36 16 42 H 0.10 -0.49 7.90 -2.38 -0.02 -0.50 16 43 H 0.08 -0.34 8.10 -2.39 -0.02 -0.36 16 44 H 0.12 0.40 7.78 -2.39 -0.02 0.38 16 45 H 0.38 -0.87 8.70 -74.06 -0.64 -1.51 16 46 H -0.30 -2.47 7.11 99.48 0.71 -1.76 16 47 H -0.27 -0.65 6.68 99.48 0.66 0.01 16 48 H 0.14 -0.29 4.86 -2.91 -0.01 -0.30 16 49 H 0.16 -1.11 7.15 -2.91 -0.02 -1.13 16 50 H 0.16 -1.49 7.16 -2.91 -0.02 -1.52 16 Total: 0.00 -21.17 423.26 -0.63 -21.81 By element: Atomic # 1 Polarization: -16.67 SS G_CDS: -1.04 Total: -17.71 kcal Atomic # 6 Polarization: 3.87 SS G_CDS: 4.53 Total: 8.40 kcal Atomic # 7 Polarization: 0.95 SS G_CDS: -5.22 Total: -4.27 kcal Atomic # 8 Polarization: -7.59 SS G_CDS: -4.00 Total: -11.59 kcal Atomic # 9 Polarization: -1.79 SS G_CDS: 3.02 Total: 1.23 kcal Atomic # 14 Polarization: 0.05 SS G_CDS: 2.08 Total: 2.13 kcal Total: -21.17 -0.63 -21.81 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16500644_6406254.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -214.856 kcal (2) G-P(sol) polarization free energy of solvation -21.172 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -236.029 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.633 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.806 kcal (6) G-S(sol) free energy of system = (1) + (5) -236.662 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.62 seconds