Wall clock time and date at job start Sun Mar 7 2021 09:04:30 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42902 * 1 3 3 C 1.35962 * 117.00037 * 2 1 4 4 C 1.39452 * 120.12156 * 179.97438 * 3 2 1 5 5 O 1.34778 * 133.24387 * 0.06524 * 4 3 2 6 6 C 1.34922 * 110.84444 * 179.97438 * 5 4 3 7 7 C 1.46991 * 125.13977 * 180.02562 * 6 5 4 8 8 O 1.21659 * 119.99940 * 180.02562 * 7 6 5 9 9 N 1.34769 * 120.00253 * 0.02562 * 7 6 5 10 10 C 1.46500 * 120.00241 * 180.02562 * 9 7 6 11 11 C 1.53006 * 109.46998 * 180.02562 * 10 9 7 12 12 F 1.39901 * 112.84917 * 48.80659 * 11 10 9 13 13 C 1.53781 * 113.61135 * 179.97438 * 11 10 9 14 14 C 1.53782 * 87.08011 * 139.98001 * 13 11 10 15 15 H 1.08994 * 113.61984 * 219.93302 * 14 13 11 16 16 C 1.53007 * 113.61241 * 89.11500 * 14 13 11 17 17 O 1.42891 * 109.47170 * 175.00040 * 16 14 13 18 18 C 1.53772 * 113.61475 * 277.49649 * 11 10 9 19 19 C 1.35816 * 109.71797 * 0.26687 * 6 5 4 20 20 C 1.40603 * 119.13626 * 180.02562 * 4 3 2 21 21 C 1.39779 * 120.12228 * 359.97438 * 20 4 3 22 22 C 1.50702 * 120.09451 * 180.02562 * 21 20 4 23 23 O 1.42897 * 109.47199 * 285.00007 * 22 21 20 24 24 Si 1.86303 * 109.47011 * 165.00070 * 22 21 20 25 25 C 1.36635 * 119.81063 * 0.02562 * 21 20 4 26 26 C 1.38257 * 120.12194 * 0.02562 * 3 2 1 27 27 H 1.08991 * 109.46933 * 60.00334 * 1 2 3 28 28 H 1.09006 * 109.47041 * 180.02562 * 1 2 3 29 29 H 1.08995 * 109.46802 * 299.99976 * 1 2 3 30 30 H 0.97010 * 119.99849 * 0.02562 * 9 7 6 31 31 H 1.09000 * 109.47175 * 60.00333 * 10 9 7 32 32 H 1.09001 * 109.47297 * 299.99840 * 10 9 7 33 33 H 1.09000 * 113.61578 * 254.52872 * 13 11 10 34 34 H 1.09007 * 113.61310 * 25.35225 * 13 11 10 35 35 H 1.09001 * 109.47026 * 295.00253 * 16 14 13 36 36 H 1.09006 * 109.46795 * 54.99990 * 16 14 13 37 37 H 0.96697 * 114.00263 * 180.02562 * 17 16 14 38 38 H 1.09000 * 113.61922 * 334.57064 * 18 11 10 39 39 H 1.08999 * 113.61689 * 105.47008 * 18 11 10 40 40 H 1.08002 * 126.95475 * 179.69637 * 19 6 5 41 41 H 1.09003 * 109.47118 * 45.00279 * 22 21 20 42 42 H 0.96702 * 114.00108 * 180.02562 * 23 22 21 43 43 H 1.48502 * 109.99978 * 60.00036 * 24 22 21 44 44 H 1.48491 * 110.00107 * 181.31809 * 24 22 21 45 45 H 1.07992 * 119.75121 * 179.97438 * 25 21 20 46 46 H 1.07998 * 119.65793 * 359.97301 * 26 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0463 1.2114 0.0000 4 6 3.4387 1.2874 0.0005 5 8 4.4142 0.3573 0.0000 6 6 5.6318 0.9386 0.0004 7 6 6.9131 0.2184 -0.0006 8 8 7.9596 0.8388 0.0004 9 7 6.9287 -1.1292 -0.0024 10 6 8.2058 -1.8471 -0.0028 11 6 7.9436 -3.3545 -0.0057 12 9 7.0146 -3.7424 -0.9772 13 6 9.2262 -4.2028 -0.0069 14 6 8.5117 -5.1425 0.9787 15 1 9.1575 -5.5132 1.7746 16 6 7.7125 -6.2541 0.2958 17 8 7.1842 -7.1384 1.2862 18 6 7.6559 -3.9323 1.3899 19 6 5.4945 2.2898 0.0072 20 6 4.0554 2.5509 0.0011 21 6 3.2766 3.7116 0.0005 22 6 3.9382 5.0656 0.0005 23 8 4.4601 5.3408 1.3020 24 14 2.6867 6.3684 -0.4548 25 6 1.9136 3.6151 0.0000 26 6 1.2958 2.3726 0.0005 27 1 -0.3633 0.5137 -0.8899 28 1 -0.3633 -1.0277 0.0005 29 1 -0.3633 0.5138 0.8900 30 1 6.0943 -1.6239 -0.0036 31 1 8.7739 -1.5785 0.8879 32 1 8.7748 -1.5759 -0.8921 33 1 9.4437 -4.6641 -0.9703 34 1 10.0882 -3.6917 0.4219 35 1 6.8931 -5.8153 -0.2737 36 1 8.3654 -6.8104 -0.3769 37 1 6.6652 -7.8695 0.9241 38 1 8.0880 -3.3478 2.2022 39 1 6.6061 -4.1753 1.5541 40 1 6.2875 3.0230 0.0137 41 1 4.7509 5.0729 -0.7259 42 1 4.9007 6.1984 1.3759 43 1 1.5734 6.3687 0.5279 44 1 3.3338 7.7044 -0.4894 45 1 1.3128 4.5124 0.0000 46 1 0.2175 2.3119 0.0005 There are 67 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 67 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16500644_6672420.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:04:30 Heat of formation + Delta-G solvation = -129.223238 kcal Electronic energy + Delta-G solvation = -33036.041212 eV Core-core repulsion = 28196.292408 eV Total energy + Delta-G solvation = -4839.748803 eV No. of doubly occupied orbitals = 67 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 366.140 amu Computer time = 1.19 seconds Orbital eigenvalues (eV) -48.95457 -43.61976 -40.92353 -40.39528 -39.81548 -38.97448 -37.24628 -37.17095 -35.73916 -33.53883 -32.01656 -31.31798 -30.17616 -28.65881 -27.27227 -27.08193 -26.21644 -24.63384 -23.91302 -22.87613 -21.86593 -21.57526 -20.32474 -19.74901 -18.88341 -18.63812 -18.54427 -18.34592 -17.63641 -17.49609 -17.20709 -16.96426 -16.79152 -16.58117 -16.33150 -16.12585 -15.77288 -15.66773 -15.59909 -15.37799 -15.00773 -14.60431 -14.45894 -14.25529 -14.10152 -13.99676 -13.88289 -13.77224 -13.55951 -13.38062 -13.32341 -13.20520 -12.64721 -12.55250 -12.42305 -12.06348 -11.89769 -11.73820 -11.71273 -11.41482 -11.35745 -10.90623 -10.85083 -10.49857 -10.34667 -9.72311 -8.93990 -5.00887 -0.55210 0.17784 0.74154 1.20944 1.31775 1.54126 1.88269 1.89065 2.06294 2.08644 2.41832 2.87167 2.97877 3.06618 3.14755 3.23366 3.37016 3.39786 3.59502 3.68907 3.78433 3.87956 3.98972 4.01471 4.11944 4.13728 4.14063 4.18568 4.28743 4.34199 4.36145 4.41664 4.47457 4.49684 4.50366 4.50886 4.57196 4.73290 4.81700 4.87263 4.93016 4.95788 5.08743 5.10706 5.18584 5.29990 5.36683 5.65772 6.16895 6.30973 6.42905 6.63140 6.89022 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.024 3.976 2 O -0.310 6.310 3 C 0.150 3.850 4 C 0.047 3.953 5 O -0.173 6.173 6 C -0.024 4.024 7 C 0.605 3.395 8 O -0.510 6.510 9 N -0.715 5.715 10 C 0.112 3.888 11 C 0.077 3.923 12 F -0.183 7.183 13 C -0.140 4.140 14 C -0.111 4.111 15 H 0.097 0.903 16 C 0.084 3.916 17 O -0.573 6.573 18 C -0.147 4.147 19 C -0.102 4.102 20 C -0.083 4.083 21 C -0.050 4.050 22 C -0.075 4.075 23 O -0.533 6.533 24 Si 0.688 3.312 25 C -0.090 4.090 26 C -0.177 4.177 27 H 0.061 0.939 28 H 0.105 0.895 29 H 0.060 0.940 30 H 0.412 0.588 31 H 0.096 0.904 32 H 0.087 0.913 33 H 0.089 0.911 34 H 0.111 0.889 35 H 0.058 0.942 36 H 0.051 0.949 37 H 0.383 0.617 38 H 0.105 0.895 39 H 0.086 0.914 40 H 0.173 0.827 41 H 0.077 0.923 42 H 0.380 0.620 43 H -0.253 1.253 44 H -0.259 1.259 45 H 0.140 0.860 46 H 0.149 0.851 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.023 -0.752 -2.731 4.143 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.071 4.071 2 O -0.223 6.223 3 C 0.105 3.895 4 C -0.001 4.001 5 O -0.075 6.075 6 C -0.075 4.075 7 C 0.390 3.610 8 O -0.387 6.387 9 N -0.367 5.367 10 C -0.012 4.012 11 C 0.058 3.942 12 F -0.163 7.163 13 C -0.178 4.178 14 C -0.129 4.129 15 H 0.115 0.885 16 C 0.007 3.993 17 O -0.379 6.379 18 C -0.185 4.185 19 C -0.123 4.123 20 C -0.084 4.084 21 C -0.051 4.051 22 C -0.184 4.184 23 O -0.340 6.340 24 Si 0.589 3.411 25 C -0.108 4.108 26 C -0.195 4.195 27 H 0.080 0.920 28 H 0.123 0.877 29 H 0.079 0.921 30 H 0.248 0.752 31 H 0.114 0.886 32 H 0.105 0.895 33 H 0.107 0.893 34 H 0.129 0.871 35 H 0.076 0.924 36 H 0.069 0.931 37 H 0.230 0.770 38 H 0.123 0.877 39 H 0.105 0.895 40 H 0.191 0.809 41 H 0.095 0.905 42 H 0.228 0.772 43 H -0.177 1.177 44 H -0.184 1.184 45 H 0.158 0.842 46 H 0.166 0.834 Dipole moment (debyes) X Y Z Total from point charges -2.596 -0.277 -1.995 3.286 hybrid contribution -0.130 -0.109 0.293 0.338 sum -2.727 -0.386 -1.703 3.238 Atomic orbital electron populations 1.23191 0.77330 1.04745 1.01809 1.86175 1.22152 1.25647 1.88375 1.17731 0.86478 0.85886 0.99453 1.18739 0.87449 0.86843 1.07080 1.84056 1.12613 1.34680 1.76109 1.21862 0.83878 0.92527 1.09188 1.16572 0.85559 0.81837 0.77010 1.90923 1.30336 1.67431 1.49966 1.45718 1.10438 1.05883 1.74627 1.21926 0.86075 0.88479 1.04738 1.22230 0.90210 0.93162 0.88609 1.92859 1.67116 1.91924 1.64381 1.23563 0.96199 0.96525 1.01517 1.22260 0.97736 0.93750 0.99152 0.88478 1.22072 0.96872 0.90481 0.89894 1.86444 1.72984 1.42478 1.35989 1.23683 1.02689 0.96960 0.95162 1.22694 0.94720 0.94231 1.00609 1.19394 0.92624 0.92109 1.04265 1.18337 0.92358 0.91994 1.02389 1.24781 1.04894 1.00575 0.88166 1.86621 1.76826 1.41086 1.29494 0.94968 0.79629 0.76929 0.89545 1.20525 0.93355 0.97799 0.99129 1.20953 1.00389 0.90427 1.07780 0.92001 0.87650 0.92145 0.75190 0.88637 0.89507 0.89279 0.87053 0.92357 0.93121 0.76975 0.87677 0.89488 0.80948 0.90506 0.77191 1.17750 1.18410 0.84242 0.83384 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.05 9.81 101.05 0.99 0.94 16 2 O -0.31 -0.65 10.50 -19.62 -0.21 -0.86 16 3 C 0.15 0.38 6.70 -39.12 -0.26 0.11 16 4 C 0.05 0.19 7.35 -38.24 -0.28 -0.09 16 5 O -0.17 -0.71 10.28 2.67 0.03 -0.68 16 6 C -0.02 -0.09 7.07 -36.90 -0.26 -0.35 16 7 C 0.60 2.11 7.80 -12.72 -0.10 2.01 16 8 O -0.51 -3.00 16.83 5.23 0.09 -2.91 16 9 N -0.71 -0.84 5.46 -61.52 -0.34 -1.17 16 10 C 0.11 -0.04 5.36 -4.04 -0.02 -0.07 16 11 C 0.08 -0.07 1.65 -89.81 -0.15 -0.22 16 12 F -0.18 -0.20 15.01 2.25 0.03 -0.16 16 13 C -0.14 0.31 7.13 -25.92 -0.18 0.12 16 14 C -0.11 0.09 4.20 -89.78 -0.38 -0.28 16 15 H 0.10 -0.05 8.14 -51.93 -0.42 -0.48 16 16 C 0.08 -0.02 6.66 37.16 0.25 0.23 16 17 O -0.57 -0.51 13.66 -35.23 -0.48 -1.00 16 18 C -0.15 0.15 7.07 -25.90 -0.18 -0.03 16 19 C -0.10 -0.34 10.68 -37.23 -0.40 -0.74 16 20 C -0.08 -0.29 6.16 -105.21 -0.65 -0.94 16 21 C -0.05 -0.10 5.30 -104.62 -0.55 -0.65 16 22 C -0.07 -0.02 2.70 36.01 0.10 0.07 16 23 O -0.53 -0.83 12.86 -35.23 -0.45 -1.28 16 24 Si 0.69 -0.85 30.20 -169.99 -5.13 -5.99 16 25 C -0.09 -0.05 8.62 -39.96 -0.34 -0.40 16 26 C -0.18 -0.05 9.03 -39.38 -0.36 -0.41 16 27 H 0.06 -0.22 7.66 -51.93 -0.40 -0.62 16 28 H 0.11 -0.37 8.14 -51.93 -0.42 -0.79 16 29 H 0.06 -0.19 7.66 -51.93 -0.40 -0.59 16 30 H 0.41 0.22 7.90 -40.82 -0.32 -0.11 16 31 H 0.10 -0.11 7.94 -51.93 -0.41 -0.52 16 32 H 0.09 -0.02 8.14 -51.93 -0.42 -0.44 16 33 H 0.09 -0.20 8.10 -51.93 -0.42 -0.62 16 34 H 0.11 -0.41 8.10 -51.93 -0.42 -0.83 16 35 H 0.06 0.00 6.31 -51.93 -0.33 -0.33 16 36 H 0.05 -0.06 8.14 -51.93 -0.42 -0.48 16 37 H 0.38 -1.22 9.12 45.56 0.42 -0.80 16 38 H 0.10 -0.21 7.96 -51.93 -0.41 -0.63 16 39 H 0.09 0.00 8.10 -51.93 -0.42 -0.42 16 40 H 0.17 0.38 8.06 -52.49 -0.42 -0.05 16 41 H 0.08 -0.08 7.96 -51.93 -0.41 -0.49 16 42 H 0.38 -0.96 8.74 45.56 0.40 -0.56 16 43 H -0.25 -0.30 6.75 56.52 0.38 0.08 16 44 H -0.26 -0.21 7.11 56.52 0.40 0.19 16 45 H 0.14 -0.18 4.85 -52.49 -0.25 -0.44 16 46 H 0.15 -0.39 6.26 -52.49 -0.33 -0.72 16 LS Contribution 389.24 15.07 5.87 5.87 Total: 0.00 -10.10 389.24 -8.43 -18.52 By element: Atomic # 1 Polarization: -4.60 SS G_CDS: -5.05 Total: -9.64 kcal Atomic # 6 Polarization: 2.09 SS G_CDS: -2.78 Total: -0.70 kcal Atomic # 7 Polarization: -0.84 SS G_CDS: -0.34 Total: -1.17 kcal Atomic # 8 Polarization: -5.70 SS G_CDS: -1.02 Total: -6.73 kcal Atomic # 9 Polarization: -0.20 SS G_CDS: 0.03 Total: -0.16 kcal Atomic # 14 Polarization: -0.85 SS G_CDS: -5.13 Total: -5.99 kcal Total LS contribution 5.87 Total: 5.87 kcal Total: -10.10 -8.43 -18.52 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16500644_6672420.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -110.700 kcal (2) G-P(sol) polarization free energy of solvation -10.098 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -120.798 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.425 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.523 kcal (6) G-S(sol) free energy of system = (1) + (5) -129.223 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.20 seconds